RNA–Protein interactions for RNA: ENST00000461326.1

CLK1-206, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 435 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-206ENST00000461326 RRAS2P62070 204 aaPredicted RBP1.37□□□□□ -2.19
CLK1-206ENST00000461326 KLK9Q2XQG4 91 aa1.37□□□□□ -2.19
CLK1-206ENST00000461326 DEFB114Q30KQ6 69 aa1.37□□□□□ -2.19
CLK1-206ENST00000461326 NMSQ5H8A3 153 aa1.37□□□□□ -2.19
CLK1-206ENST00000461326 SPANXN5Q5MJ07 72 aa1.37□□□□□ -2.19
CLK1-206ENST00000461326 LCN15Q6UWW0 184 aa1.37□□□□□ -2.19
CLK1-206ENST00000461326 TOMM20LQ6UXN7 152 aa1.37□□□□□ -2.19
CLK1-206ENST00000461326 FP248Q71RG6 208 aaPredicted RBP1.37□□□□□ -2.19
CLK1-206ENST00000461326 C12orf45Q8N5I9 185 aaPredicted RBP1.37□□□□□ -2.19
CLK1-206ENST00000461326 ZNF431Q8TF32 576 aaPredicted RBP1.37□□□□□ -2.19
CLK1-206ENST00000461326 PBDC1Q9BVG4 233 aa1.37□□□□□ -2.19
CLK1-206ENST00000461326 MRPL32Q9BYC8 188 aaKnown RBP1.37□□□□□ -2.19
CLK1-206ENST00000461326 WFDC10AQ9H1F0 79 aa1.37□□□□□ -2.19
CLK1-206ENST00000461326 PSENENQ9NZ42 101 aa1.37□□□□□ -2.19
CLK1-206ENST00000461326 MRPL36Q9P0J6 103 aaKnown RBP1.37□□□□□ -2.19
CLK1-206ENST00000461326 KLK9Q9UKQ9 250 aa1.37□□□□□ -2.19
CLK1-206ENST00000461326 UFC1Q9Y3C8 167 aa1.37□□□□□ -2.19
CLK1-206ENST00000461326 U3KQ87 197 aa1.37□□□□□ -2.19
CLK1-206ENST00000461326 TNCP24821 2201 aa1.37□□□□□ -2.19
CLK1-206ENST00000461326 NBEAL2Q6ZNJ1 2754 aa1.37□□□□□ -2.19
CLK1-206ENST00000461326 CSMD3Q7Z407 3707 aa1.37□□□□□ -2.19
CLK1-206ENST00000461326 TRAV30A0A087WSZ9 112 aa1.36□□□□□ -2.19
CLK1-206ENST00000461326 FAM24AA6NFZ4 105 aa1.36□□□□□ -2.19
CLK1-206ENST00000461326 PITX3O75364 302 aa1.36□□□□□ -2.19
CLK1-206ENST00000461326 IL5P05113 134 aa1.36□□□□□ -2.19
CLK1-206ENST00000461326 SLC25A6P12236 298 aa1.36□□□□□ -2.19
CLK1-206ENST00000461326 YPEL3P61236 119 aaPredicted RBP1.36□□□□□ -2.19
CLK1-206ENST00000461326 C12orf74Q32Q52 190 aa1.36□□□□□ -2.19
CLK1-206ENST00000461326 LINC00299Q6ZSB3 139 aa1.36□□□□□ -2.19
CLK1-206ENST00000461326 BPIFA4PQ86YQ2 179 aa1.36□□□□□ -2.19
CLK1-206ENST00000461326 SBSPONQ8IVN8 264 aa1.36□□□□□ -2.19
CLK1-206ENST00000461326 HIST3H2BBQ8N257 126 aa1.36□□□□□ -2.19
CLK1-206ENST00000461326 CIB3Q96Q77 187 aaPredicted RBP1.36□□□□□ -2.19
CLK1-206ENST00000461326 GINS3Q9BRX5 216 aa1.36□□□□□ -2.19
CLK1-206ENST00000461326 RHPN1-AS1Q9BWJ2 59 aa1.36□□□□□ -2.19
CLK1-206ENST00000461326 NHP2Q9NX24 153 aaKnown RBP1.36□□□□□ -2.19
CLK1-206ENST00000461326 TP73-AS1Q9UF72 201 aa1.36□□□□□ -2.19
CLK1-206ENST00000461326 CACFD1Q9UGQ2 172 aa1.36□□□□□ -2.19
CLK1-206ENST00000461326 SMPXQ9UHP9 88 aa1.36□□□□□ -2.19
CLK1-206ENST00000461326 RABAC1Q9UI14 185 aa1.36□□□□□ -2.19
CLK1-206ENST00000461326 UBE2L5PA0A1B0GUS4 154 aa1.35□□□□□ -2.19
CLK1-206ENST00000461326 SNRPGP15A8MWD9 76 aa1.35□□□□□ -2.19
CLK1-206ENST00000461326 CST7O76096 145 aa1.35□□□□□ -2.19
CLK1-206ENST00000461326 FABP1P07148 127 aa1.35□□□□□ -2.19
CLK1-206ENST00000461326 IGLC1P0CG04 106 aa1.35□□□□□ -2.19
CLK1-206ENST00000461326 PRB4P10163 310 aaPredicted RBP1.35□□□□□ -2.19
CLK1-206ENST00000461326 FGF7P21781 194 aa1.35□□□□□ -2.19
CLK1-206ENST00000461326 DEFB131AP59861 70 aa1.35□□□□□ -2.19
CLK1-206ENST00000461326 TMEM14EPQ6UXP3 125 aa1.35□□□□□ -2.19
CLK1-206ENST00000461326 CYP2G1PQ6ZSU1 146 aa1.35□□□□□ -2.19
CLK1-206ENST00000461326 STX12Q86Y82 276 aa1.35□□□□□ -2.19
CLK1-206ENST00000461326 FAM24BQ8N5W8 94 aa1.35□□□□□ -2.19
CLK1-206ENST00000461326 TRGV9Q99603 122 aa1.35□□□□□ -2.19
CLK1-206ENST00000461326 SIGMAR1Q99720 223 aa1.35□□□□□ -2.19
CLK1-206ENST00000461326 SMIM3Q9BZL3 60 aa1.35□□□□□ -2.19
CLK1-206ENST00000461326 NMES1Q9C002 83 aa1.35□□□□□ -2.19
CLK1-206ENST00000461326 NPVFQ9HCQ7 196 aa1.35□□□□□ -2.19
CLK1-206ENST00000461326 LYRM2Q9NU23 88 aaPredicted RBP1.35□□□□□ -2.19
CLK1-206ENST00000461326 UQCC1Q9NVA1 299 aa1.35□□□□□ -2.19
CLK1-206ENST00000461326 OR5AC2Q9NZP5 309 aa1.35□□□□□ -2.19
CLK1-206ENST00000461326 HIGD1AQ9Y241 93 aa1.35□□□□□ -2.19
CLK1-206ENST00000461326 CYSLTR1Q9Y271 337 aa1.35□□□□□ -2.19
CLK1-206ENST00000461326 DNAH9Q9NYC9 4486 aa1.34□□□□□ -2.19
CLK1-206ENST00000461326 TENM2Q9NT68 2774 aa1.34□□□□□ -2.19
CLK1-206ENST00000461326 TRAV5A0A0B4J249 113 aa1.34□□□□□ -2.19
CLK1-206ENST00000461326 HYPMO75409 117 aa1.34□□□□□ -2.19
CLK1-206ENST00000461326 MPC2O95563 127 aa1.34□□□□□ -2.19
CLK1-206ENST00000461326 CFDP00746 253 aaPredicted RBP1.34□□□□□ -2.19
CLK1-206ENST00000461326 ARL14EPLP0DKL9 152 aa1.34□□□□□ -2.19
CLK1-206ENST00000461326 S100A11P31949 105 aa1.34□□□□□ -2.19
CLK1-206ENST00000461326 DEFB1P60022 68 aa1.34□□□□□ -2.19
CLK1-206ENST00000461326 B2MP61769 119 aa1.34□□□□□ -2.19
CLK1-206ENST00000461326 SNRPD3P62318 126 aaKnown RBP1.34□□□□□ -2.19
CLK1-206ENST00000461326 DEFB135Q30KP9 77 aa1.34□□□□□ -2.19
CLK1-206ENST00000461326 PSMG4Q5JS54 123 aa1.34□□□□□ -2.19
CLK1-206ENST00000461326 C10orf113Q5VZT2 155 aa1.34□□□□□ -2.19
CLK1-206ENST00000461326 MIC13Q5XKP0 118 aa1.34□□□□□ -2.19
CLK1-206ENST00000461326 Q6Q795 121 aa1.34□□□□□ -2.19
CLK1-206ENST00000461326 UNQ6190/PRO20217Q6UXQ8 127 aa1.34□□□□□ -2.19
CLK1-206ENST00000461326 PATE2Q6UY27 113 aa1.34□□□□□ -2.19
CLK1-206ENST00000461326 LINC00305Q7Z4B0 112 aa1.34□□□□□ -2.19
CLK1-206ENST00000461326 OR8I2Q8N0Y5 310 aa1.34□□□□□ -2.19
CLK1-206ENST00000461326 OR4B1Q8NGF8 309 aa1.34□□□□□ -2.19
CLK1-206ENST00000461326 PPP1R1CQ8WVI7 109 aa1.34□□□□□ -2.19
CLK1-206ENST00000461326 LINC00052Q96N35 136 aa1.34□□□□□ -2.19
CLK1-206ENST00000461326 PFDN5Q99471 154 aa1.34□□□□□ -2.19
CLK1-206ENST00000461326 MGST2Q99735 147 aa1.34□□□□□ -2.19
CLK1-206ENST00000461326 NPCDR1Q9BY65 106 aa1.34□□□□□ -2.19
CLK1-206ENST00000461326 TENM3Q9P273 2699 aa1.34□□□□□ -2.2
CLK1-206ENST00000461326 FCGBPQ9Y6R7 5405 aaPredicted RBP1.34□□□□□ -2.2
CLK1-206ENST00000461326 HUWE1Q7Z6Z7 4374 aaKnown RBP1.33□□□□□ -2.2
CLK1-206ENST00000461326 FXYD6-FXYD2A0A087WZ82 144 aa1.33□□□□□ -2.2
CLK1-206ENST00000461326 TRAV2A0A0B4J234 112 aa1.33□□□□□ -2.2
CLK1-206ENST00000461326 C17orf112F2Z3M2 114 aa1.33□□□□□ -2.2
CLK1-206ENST00000461326 DEFB4AO15263 64 aa1.33□□□□□ -2.2
CLK1-206ENST00000461326 OR10J4P0C629 311 aa1.33□□□□□ -2.2
CLK1-206ENST00000461326 PYYP10082 97 aa1.33□□□□□ -2.2
CLK1-206ENST00000461326 HLA-DRB4P13762 266 aa1.33□□□□□ -2.2
CLK1-206ENST00000461326 RPL7P18124 248 aaKnown RBP1.33□□□□□ -2.2
CLK1-206ENST00000461326 RHOBP62745 196 aa1.33□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms