RNA–Protein interactions for RNA: ENST00000461195.5

TRAF4-207, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 787 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-207ENST00000461195 CYSLTR1Q9Y271 337 aa14.32□□□□□ -0.12
TRAF4-207ENST00000461195 IGLV4-3A0A075B6K6 122 aa14.31□□□□□ -0.12
TRAF4-207ENST00000461195 SYCNQ0VAF6 134 aa14.31□□□□□ -0.12
TRAF4-207ENST00000461195 GNB1LQ9BYB4 327 aa14.31□□□□□ -0.12
TRAF4-207ENST00000461195 RPS10P5Q9NQ39 176 aa14.31□□□□□ -0.12
TRAF4-207ENST00000461195 PKIGQ9Y2B9 76 aa14.31□□□□□ -0.12
TRAF4-207ENST00000461195 IGLV4-69A0A075B6H9 119 aa14.3□□□□□ -0.12
TRAF4-207ENST00000461195 A0A087WYN8 130 aa14.3□□□□□ -0.12
TRAF4-207ENST00000461195 KRTAP10-4P60372 401 aaPredicted RBP14.3□□□□□ -0.12
TRAF4-207ENST00000461195 C2orf66Q6UXQ4 117 aa14.3□□□□□ -0.12
TRAF4-207ENST00000461195 TMEM141Q96I45 108 aa14.3□□□□□ -0.12
TRAF4-207ENST00000461195 IGKV2-24A0A0C4DH68 120 aa14.29□□□□□ -0.12
TRAF4-207ENST00000461195 RPL37AP61513 92 aaKnown RBP14.29□□□□□ -0.12
TRAF4-207ENST00000461195 COX19Q49B96 90 aa14.29□□□□□ -0.12
TRAF4-207ENST00000461195 IGHV3OR16-9A0A0B4J2B5 98 aa14.28□□□□□ -0.12
TRAF4-207ENST00000461195 MAJINQ3KP22 176 aa14.27□□□□□ -0.13
TRAF4-207ENST00000461195 TEX43Q6ZNM6 134 aa14.27□□□□□ -0.13
TRAF4-207ENST00000461195 PLAC8Q9NZF1 115 aa14.27□□□□□ -0.13
TRAF4-207ENST00000461195 A0A096LNI7 61 aa14.26□□□□□ -0.13
TRAF4-207ENST00000461195 G0S2P27469 103 aa14.26□□□□□ -0.13
TRAF4-207ENST00000461195 SPAG11BQ08648 103 aa14.26□□□□□ -0.13
TRAF4-207ENST00000461195 Q6ZN92 141 aa14.26□□□□□ -0.13
TRAF4-207ENST00000461195 OR10D4PQ8NGN7 298 aa14.26□□□□□ -0.13
TRAF4-207ENST00000461195 C2orf48Q96LS8 159 aa14.26□□□□□ -0.13
TRAF4-207ENST00000461195 CAMK2N2Q96S95 79 aa14.26□□□□□ -0.13
TRAF4-207ENST00000461195 TGIF2-C20orf24A0A0A6YYL0 155 aa14.25□□□□□ -0.13
TRAF4-207ENST00000461195 Q6ZRU5 148 aa14.25□□□□□ -0.13
TRAF4-207ENST00000461195 C2orf88Q9BSF0 95 aa14.25□□□□□ -0.13
TRAF4-207ENST00000461195 LINC00474Q9P2X8 69 aa14.25□□□□□ -0.13
TRAF4-207ENST00000461195 MT-ND6P03923 174 aa14.24□□□□□ -0.13
TRAF4-207ENST00000461195 NPSP0C0P6 89 aa14.24□□□□□ -0.13
TRAF4-207ENST00000461195 ORAOV1Q8WV07 137 aa14.24□□□□□ -0.13
TRAF4-207ENST00000461195 IGIPA6NJ69 53 aa14.23□□□□□ -0.13
TRAF4-207ENST00000461195 LINC00242Q5T6M2 205 aa14.23□□□□□ -0.13
TRAF4-207ENST00000461195 STPG4Q8N801 248 aa14.23□□□□□ -0.13
TRAF4-207ENST00000461195 ALKBH7Q9BT30 221 aaPredicted RBP14.23□□□□□ -0.13
TRAF4-207ENST00000461195 VCX2Q9H322 139 aa14.23□□□□□ -0.13
TRAF4-207ENST00000461195 APOC3P02656 99 aa14.22□□□□□ -0.13
TRAF4-207ENST00000461195 UBE2D1P51668 147 aa14.22□□□□□ -0.13
TRAF4-207ENST00000461195 AMELXQ99217 191 aa14.22□□□□□ -0.13
TRAF4-207ENST00000461195 MRPL18Q9H0U6 180 aaKnown RBP14.22□□□□□ -0.13
TRAF4-207ENST00000461195 LOC107984640A0A0U1RRK4 108 aa14.21□□□□□ -0.13
TRAF4-207ENST00000461195 FABP9Q0Z7S8 132 aa14.21□□□□□ -0.13
TRAF4-207ENST00000461195 NDUFA5Q16718 116 aa14.21□□□□□ -0.13
TRAF4-207ENST00000461195 A0A087WZ39 114 aa14.2□□□□□ -0.14
TRAF4-207ENST00000461195 F8WDY8 70 aa14.2□□□□□ -0.14
TRAF4-207ENST00000461195 J3QL48 77 aa14.2□□□□□ -0.14
TRAF4-207ENST00000461195 PAPPA-AS1Q5QFB9 102 aa14.2□□□□□ -0.14
TRAF4-207ENST00000461195 ZC2HC1BQ5TFG8 222 aa14.2□□□□□ -0.14
TRAF4-207ENST00000461195 LINC00173Q6ZV60 143 aa14.2□□□□□ -0.14
TRAF4-207ENST00000461195 TOMM6Q96B49 74 aa14.2□□□□□ -0.14
TRAF4-207ENST00000461195 SNAPINO95295 136 aa14.19□□□□□ -0.14
TRAF4-207ENST00000461195 SVBPQ8N300 66 aa14.19□□□□□ -0.14
TRAF4-207ENST00000461195 TIMM17AQ99595 171 aa14.19□□□□□ -0.14
TRAF4-207ENST00000461195 PTTG1IPP53801 180 aa14.18□□□□□ -0.14
TRAF4-207ENST00000461195 RNF151Q2KHN1 245 aa14.18□□□□□ -0.14
TRAF4-207ENST00000461195 C7orf33Q8WU49 177 aa14.18□□□□□ -0.14
TRAF4-207ENST00000461195 LINC01546A6NGU7 62 aa14.17□□□□□ -0.14
TRAF4-207ENST00000461195 GAGE2BQ13066 116 aa14.17□□□□□ -0.14
TRAF4-207ENST00000461195 NDUFA1O15239 70 aa14.16□□□□□ -0.14
TRAF4-207ENST00000461195 MRPL35Q9NZE8 188 aaKnown RBP14.16□□□□□ -0.14
TRAF4-207ENST00000461195 LINC01549A6NIU2 74 aa14.15□□□□□ -0.14
TRAF4-207ENST00000461195 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP14.15□□□□□ -0.14
TRAF4-207ENST00000461195 ERASQ7Z444 233 aa14.15□□□□□ -0.14
TRAF4-207ENST00000461195 LINC01561Q8N1V8 128 aa14.15□□□□□ -0.14
TRAF4-207ENST00000461195 SCGB3A1Q96QR1 104 aa14.15□□□□□ -0.14
TRAF4-207ENST00000461195 A0A0J9YXV3 536 aa14.14□□□□□ -0.15
TRAF4-207ENST00000461195 KRTAP29-1A8MX34 341 aaPredicted RBP14.14□□□□□ -0.15
TRAF4-207ENST00000461195 FA2HQ7L5A8 372 aa14.14□□□□□ -0.15
TRAF4-207ENST00000461195 FAM19A3Q7Z5A8 133 aa14.14□□□□□ -0.15
TRAF4-207ENST00000461195 TRAPPC1Q9Y5R8 145 aa14.14□□□□□ -0.15
TRAF4-207ENST00000461195 HNRNPA3P51991 378 aaKnown RBP14.13□□□□□ -0.15
TRAF4-207ENST00000461195 SEC11AP67812 179 aa14.13□□□□□ -0.15
TRAF4-207ENST00000461195 RPL18AQ02543 176 aaKnown RBP14.13□□□□□ -0.15
TRAF4-207ENST00000461195 SMCO4Q9NRQ5 59 aa14.13□□□□□ -0.15
TRAF4-207ENST00000461195 KIAA0087Q14695 138 aa14.12□□□□□ -0.15
TRAF4-207ENST00000461195 C10orf25Q5T742 122 aa14.11□□□□□ -0.15
TRAF4-207ENST00000461195 UNQ6190/PRO20217Q6UXQ8 127 aa14.11□□□□□ -0.15
TRAF4-207ENST00000461195 HERVK_113P63121 156 aa14.1□□□□□ -0.15
TRAF4-207ENST00000461195 PKHD1L1Q86WI1 4243 aa14.1□□□□□ -0.15
TRAF4-207ENST00000461195 GEMIN7Q9H840 131 aaKnown RBP14.09□□□□□ -0.15
TRAF4-207ENST00000461195 C6orf48Q9UBA6 75 aa14.09□□□□□ -0.15
TRAF4-207ENST00000461195 OXTP01178 125 aa14.08□□□□□ -0.16
TRAF4-207ENST00000461195 A0A1W2PNN7 141 aa14.06□□□□□ -0.16
TRAF4-207ENST00000461195 PRSS2P07478 247 aa14.06□□□□□ -0.16
TRAF4-207ENST00000461195 TLX1NBP0CAT3 122 aa14.06□□□□□ -0.16
TRAF4-207ENST00000461195 C18orf32Q8TCD1 76 aa14.06□□□□□ -0.16
TRAF4-207ENST00000461195 CDKN2A-AS1Q9UH64 79 aa14.06□□□□□ -0.16
TRAF4-207ENST00000461195 TRBV30A0A0K0K1B3 111 aa14.05□□□□□ -0.16
TRAF4-207ENST00000461195 PRR3P79522 188 aaKnown RBP14.05□□□□□ -0.16
TRAF4-207ENST00000461195 C9orf116Q5BN46 136 aaPredicted RBP14.05□□□□□ -0.16
TRAF4-207ENST00000461195 C2orf82Q6UX34 121 aa14.05□□□□□ -0.16
TRAF4-207ENST00000461195 PACRGQ96M98 296 aaPredicted RBP14.05□□□□□ -0.16
TRAF4-207ENST00000461195 LINC00614P0C842 121 aa14.04□□□□□ -0.16
TRAF4-207ENST00000461195 CST9LQ9H4G1 147 aa14.04□□□□□ -0.16
TRAF4-207ENST00000461195 TOMM7Q9P0U1 55 aa14.04□□□□□ -0.16
TRAF4-207ENST00000461195 LRP1Q07954 4544 aaKnown RBP14.03□□□□□ -0.16
TRAF4-207ENST00000461195 TINCRA0A1B0GVN0 87 aa14.03□□□□□ -0.16
TRAF4-207ENST00000461195 Q6ZRP5 223 aa14.03□□□□□ -0.16
TRAF4-207ENST00000461195 Q8IZM0 81 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms