RNA–Protein interactions for RNA: ENST00000461009.1

RAB11FIP3-207, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 2

Gene RAB11FIP3, Length 514 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-207ENST00000461009 IGIPA6NJ69 53 aa8.59□□□□□ -1.03
RAB11FIP3-207ENST00000461009 APOMO95445 188 aa8.59□□□□□ -1.03
RAB11FIP3-207ENST00000461009 LINC00614P0C842 121 aa8.59□□□□□ -1.03
RAB11FIP3-207ENST00000461009 CNBPP62633 177 aaKnown RBP8.59□□□□□ -1.03
RAB11FIP3-207ENST00000461009 ERASQ7Z444 233 aa8.59□□□□□ -1.03
RAB11FIP3-207ENST00000461009 LINC00528Q8N1L1 170 aa8.59□□□□□ -1.03
RAB11FIP3-207ENST00000461009 C15orf56Q8N910 161 aa8.59□□□□□ -1.03
RAB11FIP3-207ENST00000461009 C9orf163Q8N9P6 203 aa8.59□□□□□ -1.03
RAB11FIP3-207ENST00000461009 SCGB3A1Q96QR1 104 aa8.59□□□□□ -1.03
RAB11FIP3-207ENST00000461009 TIMM17AQ99595 171 aa8.59□□□□□ -1.03
RAB11FIP3-207ENST00000461009 ZNF561-AS1K7EIQ3 104 aa8.58□□□□□ -1.04
RAB11FIP3-207ENST00000461009 LINC01620Q4KN68 170 aa8.58□□□□□ -1.04
RAB11FIP3-207ENST00000461009 C18orf32Q8TCD1 76 aa8.58□□□□□ -1.04
RAB11FIP3-207ENST00000461009 CHAC1Q9BUX1 264 aa8.58□□□□□ -1.04
RAB11FIP3-207ENST00000461009 GVQW2A0A096LPI5 108 aaPredicted RBP8.57□□□□□ -1.04
RAB11FIP3-207ENST00000461009 HIGD2BQ4VC39 106 aa8.57□□□□□ -1.04
RAB11FIP3-207ENST00000461009 C5orf38Q86SI9 138 aa8.57□□□□□ -1.04
RAB11FIP3-207ENST00000461009 AMELXQ99217 191 aa8.57□□□□□ -1.04
RAB11FIP3-207ENST00000461009 IGHV3-64A0A075B6Q5 118 aa8.56□□□□□ -1.04
RAB11FIP3-207ENST00000461009 SEC11AP67812 179 aa8.56□□□□□ -1.04
RAB11FIP3-207ENST00000461009 SCXQ7RTU7 201 aa8.56□□□□□ -1.04
RAB11FIP3-207ENST00000461009 IGHV3OR16-9A0A0B4J2B5 98 aa8.55□□□□□ -1.04
RAB11FIP3-207ENST00000461009 J3QL48 77 aa8.55□□□□□ -1.04
RAB11FIP3-207ENST00000461009 SLPIP03973 132 aa8.54□□□□□ -1.04
RAB11FIP3-207ENST00000461009 UBE2D1P51668 147 aa8.54□□□□□ -1.04
RAB11FIP3-207ENST00000461009 LINC00242Q5T6M2 205 aa8.54□□□□□ -1.04
RAB11FIP3-207ENST00000461009 PKIGQ9Y2B9 76 aa8.54□□□□□ -1.04
RAB11FIP3-207ENST00000461009 COLCA2A8K830 154 aa8.53□□□□□ -1.04
RAB11FIP3-207ENST00000461009 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.53□□□□□ -1.04
RAB11FIP3-207ENST00000461009 TRGC2P03986 189 aa8.53□□□□□ -1.04
RAB11FIP3-207ENST00000461009 FAM19A3Q7Z5A8 133 aa8.53□□□□□ -1.04
RAB11FIP3-207ENST00000461009 OR10D4PQ8NGN7 298 aa8.53□□□□□ -1.04
RAB11FIP3-207ENST00000461009 CIRBP-AS1Q8TBR5 109 aa8.53□□□□□ -1.04
RAB11FIP3-207ENST00000461009 CHCHD1Q96BP2 118 aaKnown RBP8.53□□□□□ -1.04
RAB11FIP3-207ENST00000461009 A0A087WZ39 114 aa8.52□□□□□ -1.05
RAB11FIP3-207ENST00000461009 F8WDY8 70 aa8.52□□□□□ -1.05
RAB11FIP3-207ENST00000461009 HBDP02042 147 aa8.52□□□□□ -1.05
RAB11FIP3-207ENST00000461009 COX6A2Q02221 97 aa8.52□□□□□ -1.05
RAB11FIP3-207ENST00000461009 SYCNQ0VAF6 134 aa8.52□□□□□ -1.05
RAB11FIP3-207ENST00000461009 ZC2HC1BQ5TFG8 222 aa8.52□□□□□ -1.05
RAB11FIP3-207ENST00000461009 SDIM1Q6ZPB5 146 aa8.52□□□□□ -1.05
RAB11FIP3-207ENST00000461009 LINC00173Q6ZV60 143 aa8.52□□□□□ -1.05
RAB11FIP3-207ENST00000461009 LINC01561Q8N1V8 128 aa8.52□□□□□ -1.05
RAB11FIP3-207ENST00000461009 GEMIN7Q9H840 131 aaKnown RBP8.52□□□□□ -1.05
RAB11FIP3-207ENST00000461009 IGLV4-69A0A075B6H9 119 aa8.51□□□□□ -1.05
RAB11FIP3-207ENST00000461009 HERVK_113P63121 156 aa8.51□□□□□ -1.05
RAB11FIP3-207ENST00000461009 SPAG11BQ08648 103 aa8.51□□□□□ -1.05
RAB11FIP3-207ENST00000461009 PMVKQ15126 192 aa8.51□□□□□ -1.05
RAB11FIP3-207ENST00000461009 BAGE3Q86Y29 109 aa8.51□□□□□ -1.05
RAB11FIP3-207ENST00000461009 ORAOV1Q8WV07 137 aa8.51□□□□□ -1.05
RAB11FIP3-207ENST00000461009 DPH3Q96FX2 82 aa8.51□□□□□ -1.05
RAB11FIP3-207ENST00000461009 URB1-AS1Q96HZ7 61 aa8.51□□□□□ -1.05
RAB11FIP3-207ENST00000461009 C2orf48Q96LS8 159 aa8.51□□□□□ -1.05
RAB11FIP3-207ENST00000461009 CARD19Q96LW7 228 aa8.51□□□□□ -1.05
RAB11FIP3-207ENST00000461009 FAT1Q14517 4588 aa8.51□□□□□ -1.05
RAB11FIP3-207ENST00000461009 SRRM2Q9UQ35 2752 aaKnown RBP8.5□□□□□ -1.05
RAB11FIP3-207ENST00000461009 ATP5LO75964 103 aa8.5□□□□□ -1.05
RAB11FIP3-207ENST00000461009 LINC00526Q96FQ7 95 aa8.5□□□□□ -1.05
RAB11FIP3-207ENST00000461009 CAMK2N2Q96S95 79 aa8.5□□□□□ -1.05
RAB11FIP3-207ENST00000461009 CST9LQ9H4G1 147 aa8.5□□□□□ -1.05
RAB11FIP3-207ENST00000461009 VPS13BQ7Z7G8 4022 aa8.5□□□□□ -1.05
RAB11FIP3-207ENST00000461009 PMCHL1Q16048 86 aa8.49□□□□□ -1.05
RAB11FIP3-207ENST00000461009 A0A096LNJ9 63 aa8.48□□□□□ -1.05
RAB11FIP3-207ENST00000461009 A0A0J9YXV3 536 aa8.48□□□□□ -1.05
RAB11FIP3-207ENST00000461009 TINCRA0A1B0GVN0 87 aa8.48□□□□□ -1.05
RAB11FIP3-207ENST00000461009 HSBP1O75506 76 aa8.48□□□□□ -1.05
RAB11FIP3-207ENST00000461009 NDUFA6P56556 154 aa8.48□□□□□ -1.05
RAB11FIP3-207ENST00000461009 PDZD11Q5EBL8 140 aa8.48□□□□□ -1.05
RAB11FIP3-207ENST00000461009 DMBT1Q9UGM3 2413 aaPredicted RBP8.48□□□□□ -1.05
RAB11FIP3-207ENST00000461009 NDUFA1O15239 70 aa8.47□□□□□ -1.05
RAB11FIP3-207ENST00000461009 SCO1O75880 301 aa8.47□□□□□ -1.05
RAB11FIP3-207ENST00000461009 PACRGQ96M98 296 aaPredicted RBP8.47□□□□□ -1.05
RAB11FIP3-207ENST00000461009 LINC00474Q9P2X8 69 aa8.47□□□□□ -1.05
RAB11FIP3-207ENST00000461009 KRTAP29-1A8MX34 341 aaPredicted RBP8.46□□□□□ -1.06
RAB11FIP3-207ENST00000461009 PRSS2P07478 247 aa8.46□□□□□ -1.06
RAB11FIP3-207ENST00000461009 S100A1P23297 94 aa8.46□□□□□ -1.06
RAB11FIP3-207ENST00000461009 RPL37AP61513 92 aaKnown RBP8.46□□□□□ -1.06
RAB11FIP3-207ENST00000461009 RNF151Q2KHN1 245 aa8.46□□□□□ -1.06
RAB11FIP3-207ENST00000461009 Q6ZRU5 148 aa8.46□□□□□ -1.06
RAB11FIP3-207ENST00000461009 LINC00469Q8N7U9 141 aa8.46□□□□□ -1.06
RAB11FIP3-207ENST00000461009 FLG2Q5D862 2391 aaPredicted RBP8.46□□□□□ -1.06
RAB11FIP3-207ENST00000461009 DNAH8Q96JB1 4490 aa8.45□□□□□ -1.06
RAB11FIP3-207ENST00000461009 LOC107984640A0A0U1RRK4 108 aa8.45□□□□□ -1.06
RAB11FIP3-207ENST00000461009 C6orf226Q5I0X4 101 aa8.45□□□□□ -1.06
RAB11FIP3-207ENST00000461009 CDKN2A-AS1Q9UH64 79 aa8.45□□□□□ -1.06
RAB11FIP3-207ENST00000461009 H3BRM9 83 aa8.44□□□□□ -1.06
RAB11FIP3-207ENST00000461009 CIRBPQ14011 172 aaKnown RBP8.44□□□□□ -1.06
RAB11FIP3-207ENST00000461009 IFI27L1Q96BM0 104 aa8.44□□□□□ -1.06
RAB11FIP3-207ENST00000461009 MRPL35Q9NZE8 188 aaKnown RBP8.44□□□□□ -1.06
RAB11FIP3-207ENST00000461009 TOMM7Q9P0U1 55 aa8.44□□□□□ -1.06
RAB11FIP3-207ENST00000461009 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.44□□□□□ -1.06
RAB11FIP3-207ENST00000461009 IGLV5-45A0A087WSX0 123 aa8.43□□□□□ -1.06
RAB11FIP3-207ENST00000461009 IGKV2-24A0A0C4DH68 120 aa8.43□□□□□ -1.06
RAB11FIP3-207ENST00000461009 OXTP01178 125 aa8.43□□□□□ -1.06
RAB11FIP3-207ENST00000461009 CKS1BP61024 79 aa8.43□□□□□ -1.06
RAB11FIP3-207ENST00000461009 KIAA0087Q14695 138 aa8.43□□□□□ -1.06
RAB11FIP3-207ENST00000461009 MAJINQ3KP22 176 aa8.43□□□□□ -1.06
RAB11FIP3-207ENST00000461009 UNQ6190/PRO20217Q6UXQ8 127 aa8.43□□□□□ -1.06
RAB11FIP3-207ENST00000461009 SERF1AO75920 110 aa8.42□□□□□ -1.06
RAB11FIP3-207ENST00000461009 CHTF8P0CG12 524 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms