RNA–Protein interactions for RNA: ENST00000460573.5

C9orf3-209, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-209ENST00000460573 USP17L23D6RBM5 183 aa14.78□□□□□ -0.04
C9orf3-209ENST00000460573 FOXI1Q12951 378 aa14.78□□□□□ -0.04
C9orf3-209ENST00000460573 AMELXQ99217 191 aa14.78□□□□□ -0.04
C9orf3-209ENST00000460573 C2orf88Q9BSF0 95 aa14.78□□□□□ -0.04
C9orf3-209ENST00000460573 LINC00310P59036 64 aa14.77□□□□□ -0.05
C9orf3-209ENST00000460573 KRTAP10-2P60368 255 aa14.77□□□□□ -0.05
C9orf3-209ENST00000460573 CFAP161Q6P656 301 aa14.77□□□□□ -0.05
C9orf3-209ENST00000460573 HSBP1O75506 76 aa14.76□□□□□ -0.05
C9orf3-209ENST00000460573 HBDP02042 147 aa14.76□□□□□ -0.05
C9orf3-209ENST00000460573 PCLOQ9Y6V0 5065 aa14.76□□□□□ -0.05
C9orf3-209ENST00000460573 DYNC1H1Q14204 4646 aaKnown RBP14.75□□□□□ -0.05
C9orf3-209ENST00000460573 HIST1H2BLQ99880 126 aa14.75□□□□□ -0.05
C9orf3-209ENST00000460573 A0A096LNJ9 63 aa14.74□□□□□ -0.05
C9orf3-209ENST00000460573 NUPR1O60356 82 aa14.74□□□□□ -0.05
C9orf3-209ENST00000460573 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP14.73□□□□□ -0.05
C9orf3-209ENST00000460573 PDZD11Q5EBL8 140 aa14.73□□□□□ -0.05
C9orf3-209ENST00000460573 LINC00173Q6ZV60 143 aa14.73□□□□□ -0.05
C9orf3-209ENST00000460573 IGLV5-52A0A0A0MRZ9 124 aa14.72□□□□□ -0.05
C9orf3-209ENST00000460573 FABP4P15090 132 aa14.72□□□□□ -0.05
C9orf3-209ENST00000460573 COX7A2LO14548 114 aa14.71□□□□□ -0.05
C9orf3-209ENST00000460573 UBE2D1P51668 147 aa14.71□□□□□ -0.05
C9orf3-209ENST00000460573 IGLV2-33A0A075B6J2 118 aaPredicted RBP14.7□□□□□ -0.06
C9orf3-209ENST00000460573 PRSS1P07477 247 aa14.7□□□□□ -0.06
C9orf3-209ENST00000460573 PMCHL1Q16048 86 aa14.7□□□□□ -0.06
C9orf3-209ENST00000460573 FAM19A3Q7Z5A8 133 aa14.7□□□□□ -0.06
C9orf3-209ENST00000460573 RYR1P21817 5038 aa14.69□□□□□ -0.06
C9orf3-209ENST00000460573 IGHV1-58A0A0C4DH39 117 aa14.69□□□□□ -0.06
C9orf3-209ENST00000460573 ATP5LO75964 103 aa14.69□□□□□ -0.06
C9orf3-209ENST00000460573 AKR1D1P51857 326 aa14.69□□□□□ -0.06
C9orf3-209ENST00000460573 SEC11AP67812 179 aa14.69□□□□□ -0.06
C9orf3-209ENST00000460573 LINC00242Q5T6M2 205 aa14.69□□□□□ -0.06
C9orf3-209ENST00000460573 C15orf56Q8N910 161 aa14.69□□□□□ -0.06
C9orf3-209ENST00000460573 IGHV3OR16-9A0A0B4J2B5 98 aa14.68□□□□□ -0.06
C9orf3-209ENST00000460573 hDV102S1A0JD36 115 aa14.68□□□□□ -0.06
C9orf3-209ENST00000460573 MALP21145 153 aa14.68□□□□□ -0.06
C9orf3-209ENST00000460573 ZC2HC1BQ5TFG8 222 aa14.68□□□□□ -0.06
C9orf3-209ENST00000460573 APOMO95445 188 aa14.67□□□□□ -0.06
C9orf3-209ENST00000460573 PMVKQ15126 192 aa14.67□□□□□ -0.06
C9orf3-209ENST00000460573 OR10D4PQ8NGN7 298 aa14.67□□□□□ -0.06
C9orf3-209ENST00000460573 GVQW2A0A096LPI5 108 aaPredicted RBP14.66□□□□□ -0.06
C9orf3-209ENST00000460573 GCSHP23434 173 aa14.66□□□□□ -0.06
C9orf3-209ENST00000460573 FUSP35637 526 aaKnown RBP eCLIP14.65□□□□□ -0.06
C9orf3-209ENST00000460573 HERVK_113P63121 156 aa14.65□□□□□ -0.06
C9orf3-209ENST00000460573 C5orf38Q86SI9 138 aa14.65□□□□□ -0.06
C9orf3-209ENST00000460573 CST9LQ9H4G1 147 aa14.65□□□□□ -0.06
C9orf3-209ENST00000460573 FAM19A2Q8N3H0 131 aa14.64□□□□□ -0.07
C9orf3-209ENST00000460573 HSPB8Q9UJY1 196 aa14.64□□□□□ -0.07
C9orf3-209ENST00000460573 A0A087WZ39 114 aa14.63□□□□□ -0.07
C9orf3-209ENST00000460573 CNBPP62633 177 aaKnown RBP14.63□□□□□ -0.07
C9orf3-209ENST00000460573 LINC01561Q8N1V8 128 aa14.63□□□□□ -0.07
C9orf3-209ENST00000460573 LEPROTL1O95214 131 aa14.62□□□□□ -0.07
C9orf3-209ENST00000460573 COX6A2Q02221 97 aa14.62□□□□□ -0.07
C9orf3-209ENST00000460573 Q8N1X5 172 aa14.62□□□□□ -0.07
C9orf3-209ENST00000460573 KRTAP4-5Q9BYR2 181 aa14.62□□□□□ -0.07
C9orf3-209ENST00000460573 TRAV16A0A0A6YYK6 109 aaPredicted RBP14.61□□□□□ -0.07
C9orf3-209ENST00000460573 TINCRA0A1B0GVN0 87 aa14.61□□□□□ -0.07
C9orf3-209ENST00000460573 ZNF561-AS1K7EIQ3 104 aa14.61□□□□□ -0.07
C9orf3-209ENST00000460573 HIGD2BQ4VC39 106 aa14.61□□□□□ -0.07
C9orf3-209ENST00000460573 GEMIN7Q9H840 131 aaKnown RBP14.61□□□□□ -0.07
C9orf3-209ENST00000460573 A0A0J9YXV3 536 aa14.6□□□□□ -0.07
C9orf3-209ENST00000460573 IFI27L1Q96BM0 104 aa14.6□□□□□ -0.07
C9orf3-209ENST00000460573 IGHV3-64A0A075B6Q5 118 aa14.59□□□□□ -0.07
C9orf3-209ENST00000460573 SMIM6P0DI80 62 aa14.59□□□□□ -0.07
C9orf3-209ENST00000460573 C9orf163Q8N9P6 203 aa14.58□□□□□ -0.08
C9orf3-209ENST00000460573 JOSD1Q15040 202 aaPredicted RBP14.57□□□□□ -0.08
C9orf3-209ENST00000460573 KRTAP10-1P60331 282 aa14.56□□□□□ -0.08
C9orf3-209ENST00000460573 ORAOV1Q8WV07 137 aa14.56□□□□□ -0.08
C9orf3-209ENST00000460573 C2orf48Q96LS8 159 aa14.56□□□□□ -0.08
C9orf3-209ENST00000460573 CDKN2A-AS1Q9UH64 79 aa14.56□□□□□ -0.08
C9orf3-209ENST00000460573 LRP1BQ9NZR2 4599 aa14.56□□□□□ -0.08
C9orf3-209ENST00000460573 IGLV5-45A0A087WSX0 123 aa14.55□□□□□ -0.08
C9orf3-209ENST00000460573 TRAV12-1A0A0B4J245 112 aa14.55□□□□□ -0.08
C9orf3-209ENST00000460573 F8WDY8 70 aa14.55□□□□□ -0.08
C9orf3-209ENST00000460573 SLPIP03973 132 aa14.55□□□□□ -0.08
C9orf3-209ENST00000460573 IGLC3P0DOY3 106 aa14.55□□□□□ -0.08
C9orf3-209ENST00000460573 MAP1LC3CQ9BXW4 147 aa14.55□□□□□ -0.08
C9orf3-209ENST00000460573 IGLV4-69A0A075B6H9 119 aa14.54□□□□□ -0.08
C9orf3-209ENST00000460573 SPAG11BQ08648 103 aa14.54□□□□□ -0.08
C9orf3-209ENST00000460573 LINC00469Q8N7U9 141 aa14.54□□□□□ -0.08
C9orf3-209ENST00000460573 ABCA13Q86UQ4 5058 aa14.54□□□□□ -0.08
C9orf3-209ENST00000460573 EPM2AB3EWF7 344 aa14.53□□□□□ -0.08
C9orf3-209ENST00000460573 HSPG2P98160 4391 aa14.53□□□□□ -0.08
C9orf3-209ENST00000460573 DNAH5Q8TE73 4624 aa14.52□□□□□ -0.08
C9orf3-209ENST00000460573 C3orf79P0CE67 100 aa14.52□□□□□ -0.09
C9orf3-209ENST00000460573 KRTDAPP60985 99 aa14.52□□□□□ -0.09
C9orf3-209ENST00000460573 SYCNQ0VAF6 134 aa14.52□□□□□ -0.09
C9orf3-209ENST00000460573 CHTOPQ9Y3Y2 248 aaKnown RBP14.52□□□□□ -0.09
C9orf3-209ENST00000460573 PYY3Q5JQD4 70 aa14.51□□□□□ -0.09
C9orf3-209ENST00000460573 PET117Q6UWS5 81 aa14.51□□□□□ -0.09
C9orf3-209ENST00000460573 LINC00518Q8N0U6 118 aa14.51□□□□□ -0.09
C9orf3-209ENST00000460573 LINC00526Q96FQ7 95 aa14.51□□□□□ -0.09
C9orf3-209ENST00000460573 CAMK2N2Q96S95 79 aa14.51□□□□□ -0.09
C9orf3-209ENST00000460573 CHAC1Q9BUX1 264 aa14.51□□□□□ -0.09
C9orf3-209ENST00000460573 H3BRM9 83 aa14.5□□□□□ -0.09
C9orf3-209ENST00000460573 LINC01620Q4KN68 170 aa14.5□□□□□ -0.09
C9orf3-209ENST00000460573 CARD19Q96LW7 228 aa14.5□□□□□ -0.09
C9orf3-209ENST00000460573 PKIGQ9Y2B9 76 aa14.5□□□□□ -0.09
C9orf3-209ENST00000460573 C20orf202A1L168 122 aa14.49□□□□□ -0.09
C9orf3-209ENST00000460573 SYS1-DBNDD2H3BUS1 97 aa14.49□□□□□ -0.09
C9orf3-209ENST00000460573 SCGB1D1O95968 90 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms