RNA–Protein interactions for RNA: ENST00000460185.1

HLA-DQB1-207, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

Gene HLA-DQB1, Length 428 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-207ENST00000460185 TRAV13-1A0A0B4J241 112 aa6.74□□□□□ -1.33
HLA-DQB1-207ENST00000460185 IGHV1-58A0A0C4DH39 117 aa6.74□□□□□ -1.33
HLA-DQB1-207ENST00000460185 IFITM10A6NMD0 228 aa6.74□□□□□ -1.33
HLA-DQB1-207ENST00000460185 MALP21145 153 aa6.74□□□□□ -1.33
HLA-DQB1-207ENST00000460185 FOXI1Q12951 378 aa6.74□□□□□ -1.33
HLA-DQB1-207ENST00000460185 RNASE13Q5GAN3 156 aaKnown RBP6.74□□□□□ -1.33
HLA-DQB1-207ENST00000460185 Q8N1X5 172 aa6.74□□□□□ -1.33
HLA-DQB1-207ENST00000460185 C15orf56Q8N910 161 aa6.74□□□□□ -1.33
HLA-DQB1-207ENST00000460185 C2orf88Q9BSF0 95 aa6.74□□□□□ -1.33
HLA-DQB1-207ENST00000460185 PYGO1Q9Y3Y4 419 aa6.74□□□□□ -1.33
HLA-DQB1-207ENST00000460185 GVQW2A0A096LPI5 108 aaPredicted RBP6.73□□□□□ -1.33
HLA-DQB1-207ENST00000460185 LINC01549A6NIU2 74 aa6.73□□□□□ -1.33
HLA-DQB1-207ENST00000460185 COX7A2LO14548 114 aa6.73□□□□□ -1.33
HLA-DQB1-207ENST00000460185 APOMO95445 188 aa6.73□□□□□ -1.33
HLA-DQB1-207ENST00000460185 FABP9Q0Z7S8 132 aa6.73□□□□□ -1.33
HLA-DQB1-207ENST00000460185 KIAA1644Q3SXP7 199 aa6.73□□□□□ -1.33
HLA-DQB1-207ENST00000460185 LINC01620Q4KN68 170 aa6.73□□□□□ -1.33
HLA-DQB1-207ENST00000460185 PAPPA-AS1Q5QFB9 102 aa6.73□□□□□ -1.33
HLA-DQB1-207ENST00000460185 C2orf66Q6UXQ4 117 aa6.73□□□□□ -1.33
HLA-DQB1-207ENST00000460185 C9orf163Q8N9P6 203 aa6.73□□□□□ -1.33
HLA-DQB1-207ENST00000460185 PRSS3P2Q8NHM4 247 aa6.73□□□□□ -1.33
HLA-DQB1-207ENST00000460185 TMEM141Q96I45 108 aa6.73□□□□□ -1.33
HLA-DQB1-207ENST00000460185 SMCO4Q9NRQ5 59 aa6.73□□□□□ -1.33
HLA-DQB1-207ENST00000460185 IGHV3-64A0A075B6Q5 118 aa6.72□□□□□ -1.33
HLA-DQB1-207ENST00000460185 TGIF2-C20orf24A0A0A6YYL0 155 aa6.72□□□□□ -1.33
HLA-DQB1-207ENST00000460185 EPM2AB3EWF7 344 aa6.72□□□□□ -1.33
HLA-DQB1-207ENST00000460185 ZNF561-AS1K7EIQ3 104 aa6.72□□□□□ -1.33
HLA-DQB1-207ENST00000460185 NPSP0C0P6 89 aa6.72□□□□□ -1.33
HLA-DQB1-207ENST00000460185 HIGD2BQ4VC39 106 aa6.72□□□□□ -1.33
HLA-DQB1-207ENST00000460185 TEX43Q6ZNM6 134 aa6.72□□□□□ -1.33
HLA-DQB1-207ENST00000460185 Q6ZSA8 131 aa6.72□□□□□ -1.33
HLA-DQB1-207ENST00000460185 XGP55808 180 aa6.71□□□□□ -1.34
HLA-DQB1-207ENST00000460185 FA2HQ7L5A8 372 aa6.71□□□□□ -1.34
HLA-DQB1-207ENST00000460185 ALKBH7Q9BT30 221 aaPredicted RBP6.71□□□□□ -1.34
HLA-DQB1-207ENST00000460185 TRAPPC1Q9Y5R8 145 aa6.71□□□□□ -1.34
HLA-DQB1-207ENST00000460185 DNAH8Q96JB1 4490 aa6.71□□□□□ -1.34
HLA-DQB1-207ENST00000460185 IGLV4-3A0A075B6K6 122 aa6.7□□□□□ -1.34
HLA-DQB1-207ENST00000460185 CHAC1Q9BUX1 264 aa6.7□□□□□ -1.34
HLA-DQB1-207ENST00000460185 HAMPP81172 84 aa6.69□□□□□ -1.34
HLA-DQB1-207ENST00000460185 Q5VSD8 79 aa6.69□□□□□ -1.34
HLA-DQB1-207ENST00000460185 SCXQ7RTU7 201 aa6.69□□□□□ -1.34
HLA-DQB1-207ENST00000460185 OR10D4PQ8NGN7 298 aa6.69□□□□□ -1.34
HLA-DQB1-207ENST00000460185 CARD19Q96LW7 228 aa6.69□□□□□ -1.34
HLA-DQB1-207ENST00000460185 TIMM17AQ99595 171 aa6.69□□□□□ -1.34
HLA-DQB1-207ENST00000460185 OPRPNQ99935 248 aaPredicted RBP6.69□□□□□ -1.34
HLA-DQB1-207ENST00000460185 VCX2Q9H322 139 aa6.69□□□□□ -1.34
HLA-DQB1-207ENST00000460185 FAM30AQ9NZY2 134 aa6.69□□□□□ -1.34
HLA-DQB1-207ENST00000460185 SEC11AP67812 179 aa6.68□□□□□ -1.34
HLA-DQB1-207ENST00000460185 C5orf38Q86SI9 138 aa6.68□□□□□ -1.34
HLA-DQB1-207ENST00000460185 TOMM6Q96B49 74 aa6.68□□□□□ -1.34
HLA-DQB1-207ENST00000460185 SMR3BP02814 79 aaPredicted RBP6.67□□□□□ -1.34
HLA-DQB1-207ENST00000460185 RAB5BP61020 215 aa6.67□□□□□ -1.34
HLA-DQB1-207ENST00000460185 SPAG11BQ08648 103 aa6.67□□□□□ -1.34
HLA-DQB1-207ENST00000460185 SYCNQ0VAF6 134 aa6.67□□□□□ -1.34
HLA-DQB1-207ENST00000460185 ERASQ7Z444 233 aa6.67□□□□□ -1.34
HLA-DQB1-207ENST00000460185 SCGB3A1Q96QR1 104 aa6.67□□□□□ -1.34
HLA-DQB1-207ENST00000460185 CAMK2N2Q96S95 79 aa6.67□□□□□ -1.34
HLA-DQB1-207ENST00000460185 IGHV3OR16-9A0A0B4J2B5 98 aa6.66□□□□□ -1.34
HLA-DQB1-207ENST00000460185 LINC01546A6NGU7 62 aa6.66□□□□□ -1.34
HLA-DQB1-207ENST00000460185 IGIPA6NJ69 53 aa6.66□□□□□ -1.34
HLA-DQB1-207ENST00000460185 HERVK_113P63121 156 aa6.66□□□□□ -1.34
HLA-DQB1-207ENST00000460185 C18orf32Q8TCD1 76 aa6.66□□□□□ -1.34
HLA-DQB1-207ENST00000460185 ORAOV1Q8WV07 137 aa6.66□□□□□ -1.34
HLA-DQB1-207ENST00000460185 C2orf48Q96LS8 159 aa6.66□□□□□ -1.34
HLA-DQB1-207ENST00000460185 AMELXQ99217 191 aa6.66□□□□□ -1.34
HLA-DQB1-207ENST00000460185 LINC00474Q9P2X8 69 aa6.66□□□□□ -1.34
HLA-DQB1-207ENST00000460185 IGLV4-69A0A075B6H9 119 aa6.65□□□□□ -1.34
HLA-DQB1-207ENST00000460185 F8WDY8 70 aa6.65□□□□□ -1.34
HLA-DQB1-207ENST00000460185 SLPIP03973 132 aa6.65□□□□□ -1.34
HLA-DQB1-207ENST00000460185 UBE2D1P51668 147 aa6.65□□□□□ -1.34
HLA-DQB1-207ENST00000460185 LINC00242Q5T6M2 205 aa6.65□□□□□ -1.34
HLA-DQB1-207ENST00000460185 SDIM1Q6ZPB5 146 aa6.65□□□□□ -1.34
HLA-DQB1-207ENST00000460185 SLC7A5P1Q8MH63 180 aa6.65□□□□□ -1.34
HLA-DQB1-207ENST00000460185 CIRBP-AS1Q8TBR5 109 aa6.65□□□□□ -1.34
HLA-DQB1-207ENST00000460185 FAM104AQ969W3 186 aa6.65□□□□□ -1.34
HLA-DQB1-207ENST00000460185 DPH3Q96FX2 82 aa6.65□□□□□ -1.34
HLA-DQB1-207ENST00000460185 PACRGQ96M98 296 aaPredicted RBP6.65□□□□□ -1.34
HLA-DQB1-207ENST00000460185 GEMIN7Q9H840 131 aaKnown RBP6.65□□□□□ -1.34
HLA-DQB1-207ENST00000460185 A0A087WZ39 114 aa6.64□□□□□ -1.35
HLA-DQB1-207ENST00000460185 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.64□□□□□ -1.35
HLA-DQB1-207ENST00000460185 NDUFA1O15239 70 aa6.64□□□□□ -1.35
HLA-DQB1-207ENST00000460185 COX6A2Q02221 97 aa6.64□□□□□ -1.35
HLA-DQB1-207ENST00000460185 LINC00173Q6ZV60 143 aa6.64□□□□□ -1.35
HLA-DQB1-207ENST00000460185 CBLN2Q8IUK8 224 aa6.64□□□□□ -1.35
HLA-DQB1-207ENST00000460185 LINC01561Q8N1V8 128 aa6.64□□□□□ -1.35
HLA-DQB1-207ENST00000460185 LINC00526Q96FQ7 95 aa6.64□□□□□ -1.35
HLA-DQB1-207ENST00000460185 PCLOQ9Y6V0 5065 aa6.63□□□□□ -1.35
HLA-DQB1-207ENST00000460185 IGKV2-24A0A0C4DH68 120 aa6.63□□□□□ -1.35
HLA-DQB1-207ENST00000460185 LOC107984640A0A0U1RRK4 108 aa6.63□□□□□ -1.35
HLA-DQB1-207ENST00000460185 HBDP02042 147 aa6.63□□□□□ -1.35
HLA-DQB1-207ENST00000460185 LINC00614P0C842 121 aa6.63□□□□□ -1.35
HLA-DQB1-207ENST00000460185 CIRBPQ14011 172 aaKnown RBP6.63□□□□□ -1.35
HLA-DQB1-207ENST00000460185 FAM19A3Q7Z5A8 133 aa6.63□□□□□ -1.35
HLA-DQB1-207ENST00000460185 SPACA4Q8TDM5 124 aa6.63□□□□□ -1.35
HLA-DQB1-207ENST00000460185 PRSS2P07478 247 aa6.62□□□□□ -1.35
HLA-DQB1-207ENST00000460185 Q6ZRU5 148 aa6.62□□□□□ -1.35
HLA-DQB1-207ENST00000460185 YPEL4Q96NS1 127 aa6.62□□□□□ -1.35
HLA-DQB1-207ENST00000460185 ABCA13Q86UQ4 5058 aa6.62□□□□□ -1.35
HLA-DQB1-207ENST00000460185 FAT1Q14517 4588 aa6.62□□□□□ -1.35
HLA-DQB1-207ENST00000460185 ATP5LO75964 103 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms