RNA–Protein interactions for RNA: ENST00000456385.5

CLIP4-208, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2

Gene CLIP4, Length 2,311 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-208ENST00000456385 NOTCH3Q9UM47 2321 aa7.31□□□□□ -1.24
CLIP4-208ENST00000456385 ITPR1Q14643 2758 aa7.31□□□□□ -1.24
CLIP4-208ENST00000456385 USP17L23D6RBM5 183 aa7.31□□□□□ -1.24
CLIP4-208ENST00000456385 DEFB112Q30KQ8 113 aa7.31□□□□□ -1.24
CLIP4-208ENST00000456385 OBSCN-AS1Q96MR7 158 aa7.31□□□□□ -1.24
CLIP4-208ENST00000456385 TRGV1A0A0A0MS02 117 aa7.3□□□□□ -1.24
CLIP4-208ENST00000456385 IGKV3OR2-268A0A0C4DH90 116 aa7.3□□□□□ -1.24
CLIP4-208ENST00000456385 A8MTW9 85 aa7.3□□□□□ -1.24
CLIP4-208ENST00000456385 MSMBP08118 114 aa7.3□□□□□ -1.24
CLIP4-208ENST00000456385 LINC00158P58513 81 aa7.3□□□□□ -1.24
CLIP4-208ENST00000456385 Q6JHZ5 121 aa7.3□□□□□ -1.24
CLIP4-208ENST00000456385 C10orf105Q8TEF2 133 aa7.3□□□□□ -1.24
CLIP4-208ENST00000456385 XCL2Q9UBD3 114 aa7.3□□□□□ -1.24
CLIP4-208ENST00000456385 NIPBLQ6KC79 2804 aaeCLIP7.3□□□□□ -1.24
CLIP4-208ENST00000456385 CCL18P55774 89 aa7.3□□□□□ -1.24
CLIP4-208ENST00000456385 TMEM258P61165 79 aa7.3□□□□□ -1.24
CLIP4-208ENST00000456385 OR13C6PQ8NH95 151 aa7.3□□□□□ -1.24
CLIP4-208ENST00000456385 UTP20O75691 2785 aaKnown RBP7.3□□□□□ -1.24
CLIP4-208ENST00000456385 HILS1P60008 231 aa7.29□□□□□ -1.24
CLIP4-208ENST00000456385 WFDC9Q8NEX5 89 aa7.29□□□□□ -1.24
CLIP4-208ENST00000456385 RPL36AP83881 106 aaKnown RBP7.29□□□□□ -1.24
CLIP4-208ENST00000456385 C4orf26Q17RF5 130 aa7.29□□□□□ -1.24
CLIP4-208ENST00000456385 COX7B2Q8TF08 81 aa7.29□□□□□ -1.24
CLIP4-208ENST00000456385 RPL36ALQ969Q0 106 aaKnown RBP7.29□□□□□ -1.24
CLIP4-208ENST00000456385 UBE2E2Q96LR5 201 aa7.29□□□□□ -1.24
CLIP4-208ENST00000456385 MAP6D1Q9H9H5 199 aa7.29□□□□□ -1.24
CLIP4-208ENST00000456385 PFN2P35080 140 aa7.28□□□□□ -1.24
CLIP4-208ENST00000456385 INSP01308 110 aa7.28□□□□□ -1.24
CLIP4-208ENST00000456385 SS18Q15532 418 aa7.28□□□□□ -1.24
CLIP4-208ENST00000456385 Q6ZTI0 123 aa7.28□□□□□ -1.24
CLIP4-208ENST00000456385 OVOL2Q9BRP0 275 aa7.28□□□□□ -1.24
CLIP4-208ENST00000456385 NCOR2Q9Y618 2525 aa7.27□□□□□ -1.24
CLIP4-208ENST00000456385 USP9YO00507 2555 aaPredicted RBP7.27□□□□□ -1.24
CLIP4-208ENST00000456385 K7EQD1 137 aa7.27□□□□□ -1.25
CLIP4-208ENST00000456385 FHL2Q14192 279 aa7.27□□□□□ -1.25
CLIP4-208ENST00000456385 CHD6Q8TD26 2715 aa7.27□□□□□ -1.25
CLIP4-208ENST00000456385 CHD8Q9HCK8 2581 aa7.27□□□□□ -1.25
CLIP4-208ENST00000456385 H0YGX0 51 aa7.27□□□□□ -1.25
CLIP4-208ENST00000456385 UBE2L6O14933 153 aa7.27□□□□□ -1.25
CLIP4-208ENST00000456385 CCL19Q99731 98 aa7.27□□□□□ -1.25
CLIP4-208ENST00000456385 PAX4O43316 350 aa7.26□□□□□ -1.25
CLIP4-208ENST00000456385 FBN2P35556 2912 aa7.26□□□□□ -1.25
CLIP4-208ENST00000456385 LOC100131303A0A0U1RQF7 123 aa7.26□□□□□ -1.25
CLIP4-208ENST00000456385 UCNP55089 124 aa7.26□□□□□ -1.25
CLIP4-208ENST00000456385 MYO9AB2RTY4 2548 aa7.26□□□□□ -1.25
CLIP4-208ENST00000456385 C1orf158Q8N1D5 194 aa7.25□□□□□ -1.25
CLIP4-208ENST00000456385 C11orf68Q9H3H3 251 aaKnown RBP7.25□□□□□ -1.25
CLIP4-208ENST00000456385 TRAV23DV6A0A075B6W5 121 aa7.24□□□□□ -1.25
CLIP4-208ENST00000456385 Q5XG85 94 aa7.24□□□□□ -1.25
CLIP4-208ENST00000456385 HRCT1Q6UXD1 115 aa7.24□□□□□ -1.25
CLIP4-208ENST00000456385 TMEM243Q9BU79 118 aa7.24□□□□□ -1.25
CLIP4-208ENST00000456385 IGLV4-60A0A075B6I1 120 aa7.24□□□□□ -1.25
CLIP4-208ENST00000456385 TRBV10-1A0A0K0K1A3 114 aa7.24□□□□□ -1.25
CLIP4-208ENST00000456385 CCKP06307 115 aa7.24□□□□□ -1.25
CLIP4-208ENST00000456385 FAM19A1Q7Z5A9 133 aa7.24□□□□□ -1.25
CLIP4-208ENST00000456385 MAPK1IP1LQ8NDC0 245 aa7.23□□□□□ -1.25
CLIP4-208ENST00000456385 ZNF702PQ9H963 129 aa7.23□□□□□ -1.25
CLIP4-208ENST00000456385 ORMDL1Q9P0S3 153 aa7.23□□□□□ -1.25
CLIP4-208ENST00000456385 FLNCQ14315 2725 aa7.23□□□□□ -1.25
CLIP4-208ENST00000456385 B4DSR2 109 aa7.23□□□□□ -1.25
CLIP4-208ENST00000456385 GHRHP01286 108 aa7.23□□□□□ -1.25
CLIP4-208ENST00000456385 PRR3P79522 188 aaKnown RBP7.23□□□□□ -1.25
CLIP4-208ENST00000456385 IL17DQ8TAD2 202 aa7.23□□□□□ -1.25
CLIP4-208ENST00000456385 IGHV3OR16-9A0A0B4J2B5 98 aa7.22□□□□□ -1.25
CLIP4-208ENST00000456385 KHDC1LQ5JSQ8 128 aa7.22□□□□□ -1.25
CLIP4-208ENST00000456385 ENHOQ6UWT2 76 aa7.22□□□□□ -1.25
CLIP4-208ENST00000456385 DYNLRB2Q8TF09 96 aa7.22□□□□□ -1.25
CLIP4-208ENST00000456385 NOP10Q9NPE3 64 aaKnown RBP7.22□□□□□ -1.25
CLIP4-208ENST00000456385 JMJD1CQ15652 2540 aa7.22□□□□□ -1.25
CLIP4-208ENST00000456385 CENPEQ02224 2701 aa7.22□□□□□ -1.25
CLIP4-208ENST00000456385 POLQO75417 2590 aa7.22□□□□□ -1.25
CLIP4-208ENST00000456385 IBA57-AS1B1ANH7 110 aa7.22□□□□□ -1.25
CLIP4-208ENST00000456385 TRBV6-4A0A1B0GX49 114 aa7.21□□□□□ -1.26
CLIP4-208ENST00000456385 WIPF1O43516 503 aa7.21□□□□□ -1.26
CLIP4-208ENST00000456385 NBL1P41271 181 aa7.21□□□□□ -1.26
CLIP4-208ENST00000456385 ODF3L2Q3SX64 289 aa7.21□□□□□ -1.26
CLIP4-208ENST00000456385 USP9XQ93008 2570 aaPredicted RBP7.21□□□□□ -1.26
CLIP4-208ENST00000456385 DEFB114Q30KQ6 69 aa7.21□□□□□ -1.26
CLIP4-208ENST00000456385 WNK1Q9H4A3 2382 aa7.2□□□□□ -1.26
CLIP4-208ENST00000456385 TRAV25A0A0B4J276 109 aa7.2□□□□□ -1.26
CLIP4-208ENST00000456385 RNASE1P07998 156 aaKnown RBP7.2□□□□□ -1.26
CLIP4-208ENST00000456385 GNLYP22749 145 aa7.2□□□□□ -1.26
CLIP4-208ENST00000456385 STHQ8IWL8 128 aa7.2□□□□□ -1.26
CLIP4-208ENST00000456385 C20orf197Q8N268 126 aa7.2□□□□□ -1.26
CLIP4-208ENST00000456385 SETXQ7Z333 2677 aaKnown RBP7.2□□□□□ -1.26
CLIP4-208ENST00000456385 PLA2G2AP14555 144 aa7.19□□□□□ -1.26
CLIP4-208ENST00000456385 A0A096LNT2 108 aa7.19□□□□□ -1.26
CLIP4-208ENST00000456385 LY6G6DO95868 133 aa7.19□□□□□ -1.26
CLIP4-208ENST00000456385 TLN2Q9Y4G6 2542 aa7.19□□□□□ -1.26
CLIP4-208ENST00000456385 SPTBN4Q9H254 2564 aa7.19□□□□□ -1.26
CLIP4-208ENST00000456385 A0A087WZ39 114 aa7.18□□□□□ -1.26
CLIP4-208ENST00000456385 NANOS2P60321 138 aaKnown RBP7.18□□□□□ -1.26
CLIP4-208ENST00000456385 C6orf226Q5I0X4 101 aa7.18□□□□□ -1.26
CLIP4-208ENST00000456385 NF1P21359 2839 aa7.18□□□□□ -1.26
CLIP4-208ENST00000456385 CFAP46Q8IYW2 2715 aa7.18□□□□□ -1.26
CLIP4-208ENST00000456385 TRGV2A0A075B6R0 118 aa7.18□□□□□ -1.26
CLIP4-208ENST00000456385 Q8N814 137 aa7.18□□□□□ -1.26
CLIP4-208ENST00000456385 EPG5Q9HCE0 2579 aa7.17□□□□□ -1.26
CLIP4-208ENST00000456385 TEX15Q9BXT5 2789 aa7.17□□□□□ -1.26
CLIP4-208ENST00000456385 JMJD7-PLA2G4BH0Y9G9 81 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms