RNA–Protein interactions for RNA: ENST00000456096.6

TVP23A-202, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 1 (best)

Gene TVP23A, Length 1,223 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-202ENST00000456096 SRP19P09132 144 aaKnown RBP10.13□□□□□ -0.79
TVP23A-202ENST00000456096 C20orf78Q9BR46 151 aa10.13□□□□□ -0.79
TVP23A-202ENST00000456096 NAT8BQ9UHF3 227 aa10.13□□□□□ -0.79
TVP23A-202ENST00000456096 TRBV24-1A0A075B6N3 115 aa10.12□□□□□ -0.79
TVP23A-202ENST00000456096 F8WDY8 70 aa10.12□□□□□ -0.79
TVP23A-202ENST00000456096 H0Y9J4 135 aa10.12□□□□□ -0.79
TVP23A-202ENST00000456096 NDUFA1O15239 70 aa10.12□□□□□ -0.79
TVP23A-202ENST00000456096 UNQ6190/PRO20217Q6UXQ8 127 aa10.12□□□□□ -0.79
TVP23A-202ENST00000456096 FAM19A5Q7Z5A7 132 aaPredicted RBP10.12□□□□□ -0.79
TVP23A-202ENST00000456096 LINC00862A6NCI5 91 aa10.11□□□□□ -0.79
TVP23A-202ENST00000456096 CKS2P33552 79 aa10.11□□□□□ -0.79
TVP23A-202ENST00000456096 RPL32P62910 135 aaKnown RBP10.11□□□□□ -0.79
TVP23A-202ENST00000456096 TMEM241Q24JQ0 296 aa10.11□□□□□ -0.79
TVP23A-202ENST00000456096 C6orf48Q9UBA6 75 aa10.11□□□□□ -0.79
TVP23A-202ENST00000456096 TNFRSF6BO95407 300 aa10.1□□□□□ -0.79
TVP23A-202ENST00000456096 TLX1NBP0CAT3 122 aa10.1□□□□□ -0.79
TVP23A-202ENST00000456096 GAGE2EQ4V326 116 aa10.1□□□□□ -0.79
TVP23A-202ENST00000456096 FAM74A3Q4VXF1 159 aa10.1□□□□□ -0.79
TVP23A-202ENST00000456096 KRTAP7-1Q8IUC3 87 aa10.1□□□□□ -0.79
TVP23A-202ENST00000456096 SPANXA1Q9NS26 97 aa10.1□□□□□ -0.79
TVP23A-202ENST00000456096 GAGE2DQ9UEU5 116 aa10.1□□□□□ -0.79
TVP23A-202ENST00000456096 MUC2Q02817 5179 aa10.09□□□□□ -0.79
TVP23A-202ENST00000456096 TCAPO15273 167 aa10.09□□□□□ -0.79
TVP23A-202ENST00000456096 RPL23P62829 140 aaKnown RBP10.09□□□□□ -0.79
TVP23A-202ENST00000456096 MRPS36P82909 103 aaKnown RBP10.09□□□□□ -0.79
TVP23A-202ENST00000456096 SMIM27A0A1W2PRY6 76 aa10.08□□□□□ -0.8
TVP23A-202ENST00000456096 IFITM10A6NMD0 228 aa10.08□□□□□ -0.8
TVP23A-202ENST00000456096 KRTAP1-4P0C5Y4 121 aa10.08□□□□□ -0.8
TVP23A-202ENST00000456096 HBBP68871 147 aa10.08□□□□□ -0.8
TVP23A-202ENST00000456096 SMIM2Q9BVW6 85 aa10.08□□□□□ -0.8
TVP23A-202ENST00000456096 SMDT1Q9H4I9 107 aa10.08□□□□□ -0.8
TVP23A-202ENST00000456096 IGLV1-50A0A075B6I6 118 aa10.07□□□□□ -0.8
TVP23A-202ENST00000456096 A0A1B0GW15 77 aa10.06□□□□□ -0.8
TVP23A-202ENST00000456096 D6R8Y8 96 aa10.06□□□□□ -0.8
TVP23A-202ENST00000456096 KIAA0087Q14695 138 aa10.06□□□□□ -0.8
TVP23A-202ENST00000456096 ADIRFQ15847 76 aa10.06□□□□□ -0.8
TVP23A-202ENST00000456096 TGIF2-C20orf24A0A0A6YYL0 155 aa10.05□□□□□ -0.8
TVP23A-202ENST00000456096 M0QXV9 152 aa10.05□□□□□ -0.8
TVP23A-202ENST00000456096 NPYP01303 97 aa10.05□□□□□ -0.8
TVP23A-202ENST00000456096 UBE2BP63146 152 aa10.05□□□□□ -0.8
TVP23A-202ENST00000456096 C9JQL5 133 aa10.03□□□□□ -0.8
TVP23A-202ENST00000456096 MRPL54Q6P161 138 aaKnown RBP10.03□□□□□ -0.8
TVP23A-202ENST00000456096 C2orf82Q6UX34 121 aa10.03□□□□□ -0.8
TVP23A-202ENST00000456096 NAT8Q9UHE5 227 aa10.03□□□□□ -0.8
TVP23A-202ENST00000456096 F8W036 122 aa10.02□□□□□ -0.81
TVP23A-202ENST00000456096 UBE2D1P51668 147 aa10.02□□□□□ -0.81
TVP23A-202ENST00000456096 PRR4Q16378 134 aa10.02□□□□□ -0.81
TVP23A-202ENST00000456096 C9orf129Q5T035 196 aaKnown RBP10.02□□□□□ -0.81
TVP23A-202ENST00000456096 LINC00242Q5T6M2 205 aa10.02□□□□□ -0.81
TVP23A-202ENST00000456096 TRBV30A0A0K0K1B3 111 aa10.01□□□□□ -0.81
TVP23A-202ENST00000456096 NDUFC2-KCTD14E9PQ53 114 aa10.01□□□□□ -0.81
TVP23A-202ENST00000456096 IFI27P40305 119 aaPredicted RBP10.01□□□□□ -0.81
TVP23A-202ENST00000456096 IGLV4-3A0A075B6K6 122 aa10□□□□□ -0.81
TVP23A-202ENST00000456096 A0A1B0GXF2 115 aa10□□□□□ -0.81
TVP23A-202ENST00000456096 PPBPP02775 128 aa10□□□□□ -0.81
TVP23A-202ENST00000456096 S100A8P05109 93 aa10□□□□□ -0.81
TVP23A-202ENST00000456096 RAB5AP20339 215 aa10□□□□□ -0.81
TVP23A-202ENST00000456096 PYGO1Q9Y3Y4 419 aa10□□□□□ -0.81
TVP23A-202ENST00000456096 RPL13AP40429 203 aaKnown RBP9.99□□□□□ -0.81
TVP23A-202ENST00000456096 PACRGQ96M98 296 aaPredicted RBP9.99□□□□□ -0.81
TVP23A-202ENST00000456096 SRSF3P84103 164 aaKnown RBP9.98□□□□□ -0.81
TVP23A-202ENST00000456096 ORMDL3Q8N138 153 aa9.98□□□□□ -0.81
TVP23A-202ENST00000456096 TMEM141Q96I45 108 aa9.98□□□□□ -0.81
TVP23A-202ENST00000456096 TMEM136Q6ZRR5 245 aa9.97□□□□□ -0.81
TVP23A-202ENST00000456096 PRELID3AQ96N28 172 aa9.97□□□□□ -0.81
TVP23A-202ENST00000456096 CARHSP1Q9Y2V2 147 aaKnown RBP9.97□□□□□ -0.81
TVP23A-202ENST00000456096 ZNF861PO60384 105 aa9.96□□□□□ -0.82
TVP23A-202ENST00000456096 ZC2HC1BQ5TFG8 222 aa9.96□□□□□ -0.82
TVP23A-202ENST00000456096 TEX43Q6ZNM6 134 aa9.96□□□□□ -0.82
TVP23A-202ENST00000456096 LINC01561Q8N1V8 128 aa9.95□□□□□ -0.82
TVP23A-202ENST00000456096 LOC389332A0A1B0GUA5 103 aa9.94□□□□□ -0.82
TVP23A-202ENST00000456096 PEA15Q15121 130 aa9.94□□□□□ -0.82
TVP23A-202ENST00000456096 LINC00469Q8N7U9 141 aa9.94□□□□□ -0.82
TVP23A-202ENST00000456096 C22orf24Q9Y442 160 aa9.94□□□□□ -0.82
TVP23A-202ENST00000456096 C2orf88Q9BSF0 95 aa9.93□□□□□ -0.82
TVP23A-202ENST00000456096 TOMM7Q9P0U1 55 aa9.93□□□□□ -0.82
TVP23A-202ENST00000456096 TSPAN13O95857 204 aa9.92□□□□□ -0.82
TVP23A-202ENST00000456096 PRSS2P07478 247 aa9.92□□□□□ -0.82
TVP23A-202ENST00000456096 CKS1BP61024 79 aa9.92□□□□□ -0.82
TVP23A-202ENST00000456096 RAB14P61106 215 aa9.92□□□□□ -0.82
TVP23A-202ENST00000456096 Q6ZN92 141 aa9.92□□□□□ -0.82
TVP23A-202ENST00000456096 LINC00173Q6ZV60 143 aa9.92□□□□□ -0.82
TVP23A-202ENST00000456096 XAGE1AQ9HD64 81 aa9.92□□□□□ -0.82
TVP23A-202ENST00000456096 PRSS47A8MTI9 375 aa9.91□□□□□ -0.82
TVP23A-202ENST00000456096 NUPR1O60356 82 aa9.91□□□□□ -0.82
TVP23A-202ENST00000456096 C6orf226Q5I0X4 101 aa9.91□□□□□ -0.82
TVP23A-202ENST00000456096 ATP5L2Q7Z4Y8 100 aa9.91□□□□□ -0.82
TVP23A-202ENST00000456096 AMELXQ99217 191 aa9.91□□□□□ -0.82
TVP23A-202ENST00000456096 CTDSP1Q9GZU7 261 aa9.91□□□□□ -0.82
TVP23A-202ENST00000456096 VCX2Q9H322 139 aa9.91□□□□□ -0.82
TVP23A-202ENST00000456096 LBHQ53QV2 105 aaPredicted RBP9.9□□□□□ -0.82
TVP23A-202ENST00000456096 C2orf66Q6UXQ4 117 aa9.9□□□□□ -0.82
TVP23A-202ENST00000456096 MAP1LC3AQ9H492 121 aa9.9□□□□□ -0.82
TVP23A-202ENST00000456096 CYSLTR1Q9Y271 337 aa9.9□□□□□ -0.82
TVP23A-202ENST00000456096 Q8IZM0 81 aa9.89□□□□□ -0.83
TVP23A-202ENST00000456096 Q8N8P6 123 aa9.89□□□□□ -0.83
TVP23A-202ENST00000456096 ALKBH7Q9BT30 221 aaPredicted RBP9.89□□□□□ -0.83
TVP23A-202ENST00000456096 LAMTOR2Q9Y2Q5 125 aa9.89□□□□□ -0.83
TVP23A-202ENST00000456096 A0A087X002 238 aa9.88□□□□□ -0.83
TVP23A-202ENST00000456096 IGIPA6NJ69 53 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms