RNA–Protein interactions for RNA: ENST00000455906.1

COL20A1-204, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 5

Gene COL20A1, Length 750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-204ENST00000455906 TRAV9-1A0A075B6T8 112 aa11.54□□□□□ -0.56
COL20A1-204ENST00000455906 COX7A2LO14548 114 aa11.54□□□□□ -0.56
COL20A1-204ENST00000455906 VCYO14598 125 aa11.54□□□□□ -0.56
COL20A1-204ENST00000455906 RNASE13Q5GAN3 156 aaKnown RBP11.54□□□□□ -0.56
COL20A1-204ENST00000455906 SMCO4Q9NRQ5 59 aa11.54□□□□□ -0.56
COL20A1-204ENST00000455906 MALP21145 153 aa11.53□□□□□ -0.56
COL20A1-204ENST00000455906 FCER1GP30273 86 aa11.53□□□□□ -0.56
COL20A1-204ENST00000455906 LPAP08519 4548 aa11.53□□□□□ -0.56
COL20A1-204ENST00000455906 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.52□□□□□ -0.57
COL20A1-204ENST00000455906 SUMO2P61956 95 aaKnown RBP11.52□□□□□ -0.57
COL20A1-204ENST00000455906 CAMK2N2Q96S95 79 aa11.52□□□□□ -0.57
COL20A1-204ENST00000455906 APOMO95445 188 aa11.51□□□□□ -0.57
COL20A1-204ENST00000455906 Q6ZUT4 128 aa11.51□□□□□ -0.57
COL20A1-204ENST00000455906 C2orf48Q96LS8 159 aa11.51□□□□□ -0.57
COL20A1-204ENST00000455906 TRAV13-1A0A0B4J241 112 aa11.5□□□□□ -0.57
COL20A1-204ENST00000455906 A0A1B0GXF2 115 aa11.5□□□□□ -0.57
COL20A1-204ENST00000455906 C5orf38Q86SI9 138 aa11.5□□□□□ -0.57
COL20A1-204ENST00000455906 PPP1R17O96001 155 aa11.49□□□□□ -0.57
COL20A1-204ENST00000455906 C9orf116Q5BN46 136 aaPredicted RBP11.49□□□□□ -0.57
COL20A1-204ENST00000455906 CBLN2Q8IUK8 224 aa11.49□□□□□ -0.57
COL20A1-204ENST00000455906 KIR2DL4Q99706 377 aa11.49□□□□□ -0.57
COL20A1-204ENST00000455906 PSORS1C2Q9UIG4 136 aa11.49□□□□□ -0.57
COL20A1-204ENST00000455906 SMAGPQ0VAQ4 97 aa11.48□□□□□ -0.57
COL20A1-204ENST00000455906 COX19Q49B96 90 aa11.48□□□□□ -0.57
COL20A1-204ENST00000455906 MRPL51Q4U2R6 128 aaKnown RBP11.48□□□□□ -0.57
COL20A1-204ENST00000455906 TIMM21Q9BVV7 248 aa11.48□□□□□ -0.57
COL20A1-204ENST00000455906 TGIF2-C20orf24A0A0A6YYL0 155 aa11.47□□□□□ -0.57
COL20A1-204ENST00000455906 FAM104BQ5XKR9 115 aa11.47□□□□□ -0.57
COL20A1-204ENST00000455906 OPRPNQ99935 248 aaPredicted RBP11.47□□□□□ -0.57
COL20A1-204ENST00000455906 RPL18AQ02543 176 aaKnown RBP11.46□□□□□ -0.57
COL20A1-204ENST00000455906 SPAG11BQ08648 103 aa11.46□□□□□ -0.57
COL20A1-204ENST00000455906 FAM104AQ969W3 186 aa11.46□□□□□ -0.57
COL20A1-204ENST00000455906 TRBV24-1A0A075B6N3 115 aa11.45□□□□□ -0.58
COL20A1-204ENST00000455906 SCO1O75880 301 aa11.45□□□□□ -0.58
COL20A1-204ENST00000455906 MT-ND6P03923 174 aa11.45□□□□□ -0.58
COL20A1-204ENST00000455906 RNF151Q2KHN1 245 aa11.45□□□□□ -0.58
COL20A1-204ENST00000455906 PHF5AQ7RTV0 110 aaKnown RBP11.45□□□□□ -0.58
COL20A1-204ENST00000455906 OR10D4PQ8NGN7 298 aa11.44□□□□□ -0.58
COL20A1-204ENST00000455906 TMEM18Q96B42 140 aa11.44□□□□□ -0.58
COL20A1-204ENST00000455906 C20orf78Q9BR46 151 aa11.44□□□□□ -0.58
COL20A1-204ENST00000455906 GNB1LQ9BYB4 327 aa11.44□□□□□ -0.58
COL20A1-204ENST00000455906 CKS2P33552 79 aa11.43□□□□□ -0.58
COL20A1-204ENST00000455906 RPL39P62891 51 aaKnown RBP11.43□□□□□ -0.58
COL20A1-204ENST00000455906 RPL32P62910 135 aaKnown RBP11.43□□□□□ -0.58
COL20A1-204ENST00000455906 C1orf137Q5JT78 98 aa11.43□□□□□ -0.58
COL20A1-204ENST00000455906 TMEM136Q6ZRR5 245 aa11.43□□□□□ -0.58
COL20A1-204ENST00000455906 IGHV3OR16-9A0A0B4J2B5 98 aa11.42□□□□□ -0.58
COL20A1-204ENST00000455906 MRPL35Q9NZE8 188 aaKnown RBP11.42□□□□□ -0.58
COL20A1-204ENST00000455906 ORAOV1Q8WV07 137 aa11.41□□□□□ -0.58
COL20A1-204ENST00000455906 YPEL4Q96NS1 127 aa11.41□□□□□ -0.58
COL20A1-204ENST00000455906 TRAPPC1Q9Y5R8 145 aa11.41□□□□□ -0.58
COL20A1-204ENST00000455906 D6R8Y8 96 aa11.4□□□□□ -0.58
COL20A1-204ENST00000455906 TNFRSF6BO95407 300 aa11.4□□□□□ -0.58
COL20A1-204ENST00000455906 PPBPP02775 128 aa11.4□□□□□ -0.58
COL20A1-204ENST00000455906 FABP9Q0Z7S8 132 aa11.4□□□□□ -0.58
COL20A1-204ENST00000455906 ORMDL3Q8N138 153 aa11.4□□□□□ -0.58
COL20A1-204ENST00000455906 MRPL18Q9H0U6 180 aaKnown RBP11.4□□□□□ -0.58
COL20A1-204ENST00000455906 FAM168BA1KXE4 195 aa11.39□□□□□ -0.59
COL20A1-204ENST00000455906 TCAPO15273 167 aa11.39□□□□□ -0.59
COL20A1-204ENST00000455906 C10orf25Q5T742 122 aa11.39□□□□□ -0.59
COL20A1-204ENST00000455906 KRTAP11-1Q8IUC1 163 aa11.39□□□□□ -0.59
COL20A1-204ENST00000455906 SMIM2Q9BVW6 85 aa11.39□□□□□ -0.59
COL20A1-204ENST00000455906 SPANXA1Q9NS26 97 aa11.39□□□□□ -0.59
COL20A1-204ENST00000455906 F8WDY8 70 aa11.38□□□□□ -0.59
COL20A1-204ENST00000455906 IGLV7-43P04211 117 aa11.38□□□□□ -0.59
COL20A1-204ENST00000455906 MRPS36P82909 103 aaKnown RBP11.38□□□□□ -0.59
COL20A1-204ENST00000455906 NDUFA1O15239 70 aa11.37□□□□□ -0.59
COL20A1-204ENST00000455906 TLX1NBP0CAT3 122 aa11.37□□□□□ -0.59
COL20A1-204ENST00000455906 KIAA1644Q3SXP7 199 aa11.37□□□□□ -0.59
COL20A1-204ENST00000455906 PRELID3AQ96N28 172 aa11.37□□□□□ -0.59
COL20A1-204ENST00000455906 C6orf48Q9UBA6 75 aa11.37□□□□□ -0.59
COL20A1-204ENST00000455906 COLCA2A8K830 154 aa11.36□□□□□ -0.59
COL20A1-204ENST00000455906 UNQ6190/PRO20217Q6UXQ8 127 aa11.36□□□□□ -0.59
COL20A1-204ENST00000455906 PRR26Q8N8Z3 221 aa11.36□□□□□ -0.59
COL20A1-204ENST00000455906 IFITM10A6NMD0 228 aa11.35□□□□□ -0.59
COL20A1-204ENST00000455906 NPYP01303 97 aa11.35□□□□□ -0.59
COL20A1-204ENST00000455906 RAB5AP20339 215 aa11.35□□□□□ -0.59
COL20A1-204ENST00000455906 KRTAP7-1Q8IUC3 87 aa11.35□□□□□ -0.59
COL20A1-204ENST00000455906 DIRC1Q969H9 104 aa11.35□□□□□ -0.59
COL20A1-204ENST00000455906 A0A087WZ39 114 aa11.34□□□□□ -0.59
COL20A1-204ENST00000455906 KIAA0087Q14695 138 aa11.34□□□□□ -0.59
COL20A1-204ENST00000455906 LAMTOR2Q9Y2Q5 125 aa11.34□□□□□ -0.59
COL20A1-204ENST00000455906 H0Y9J4 135 aa11.33□□□□□ -0.6
COL20A1-204ENST00000455906 FAM19A5Q7Z5A7 132 aaPredicted RBP11.33□□□□□ -0.6
COL20A1-204ENST00000455906 GAGE2EQ4V326 116 aa11.32□□□□□ -0.6
COL20A1-204ENST00000455906 MAP1LC3AQ9H492 121 aa11.32□□□□□ -0.6
COL20A1-204ENST00000455906 GAGE2DQ9UEU5 116 aa11.32□□□□□ -0.6
COL20A1-204ENST00000455906 LOC389332A0A1B0GUA5 103 aa11.31□□□□□ -0.6
COL20A1-204ENST00000455906 TRGC2P03986 189 aa11.3□□□□□ -0.6
COL20A1-204ENST00000455906 LINC00242Q5T6M2 205 aa11.3□□□□□ -0.6
COL20A1-204ENST00000455906 ALKBH7Q9BT30 221 aaPredicted RBP11.3□□□□□ -0.6
COL20A1-204ENST00000455906 IGLV4-3A0A075B6K6 122 aa11.29□□□□□ -0.6
COL20A1-204ENST00000455906 KRTAP1-4P0C5Y4 121 aa11.29□□□□□ -0.6
COL20A1-204ENST00000455906 PYGO1Q9Y3Y4 419 aa11.29□□□□□ -0.6
COL20A1-204ENST00000455906 IFI27P40305 119 aaPredicted RBP11.28□□□□□ -0.6
COL20A1-204ENST00000455906 TRBV30A0A0K0K1B3 111 aa11.27□□□□□ -0.61
COL20A1-204ENST00000455906 M0QXV9 152 aa11.27□□□□□ -0.61
COL20A1-204ENST00000455906 C2orf82Q6UX34 121 aa11.27□□□□□ -0.61
COL20A1-204ENST00000455906 IGLV1-50A0A075B6I6 118 aa11.26□□□□□ -0.61
COL20A1-204ENST00000455906 C9orf129Q5T035 196 aaKnown RBP11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 91.9 ms