RNA–Protein interactions for RNA: ENST00000455883.2

CSMD3-204, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 12,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-204ENST00000455883 FAM215AQ9Y5M1 114 aa3.9□□□□□ -1.78
CSMD3-204ENST00000455883 TFF2Q03403 129 aa3.9□□□□□ -1.79
CSMD3-204ENST00000455883 IGLV2-8P01709 118 aa3.9□□□□□ -1.79
CSMD3-204ENST00000455883 LYPD2Q6UXB3 125 aa3.9□□□□□ -1.79
CSMD3-204ENST00000455883 PATE2Q6UY27 113 aa3.9□□□□□ -1.79
CSMD3-204ENST00000455883 C9orf85Q96MD7 179 aa3.9□□□□□ -1.79
CSMD3-204ENST00000455883 IGLV4-69A0A075B6H9 119 aa3.9□□□□□ -1.79
CSMD3-204ENST00000455883 CD24P25063 80 aa3.9□□□□□ -1.79
CSMD3-204ENST00000455883 FLNCQ14315 2725 aa3.89□□□□□ -1.79
CSMD3-204ENST00000455883 Q8N814 137 aa3.89□□□□□ -1.79
CSMD3-204ENST00000455883 COL4A3Q01955 1670 aa3.89□□□□□ -1.79
CSMD3-204ENST00000455883 HILS1P60008 231 aa3.89□□□□□ -1.79
CSMD3-204ENST00000455883 COL4A2P08572 1712 aa3.89□□□□□ -1.79
CSMD3-204ENST00000455883 WFDC10AQ9H1F0 79 aa3.89□□□□□ -1.79
CSMD3-204ENST00000455883 NIPBLQ6KC79 2804 aaeCLIP3.89□□□□□ -1.79
CSMD3-204ENST00000455883 IGKV1D-37A0A075B6S9 117 aa3.89□□□□□ -1.79
CSMD3-204ENST00000455883 TMEM254Q8TBM7 123 aa3.89□□□□□ -1.79
CSMD3-204ENST00000455883 E7EUB6 86 aa3.89□□□□□ -1.79
CSMD3-204ENST00000455883 PLAC8L1A1L4L8 177 aa3.88□□□□□ -1.79
CSMD3-204ENST00000455883 RPL39P62891 51 aaKnown RBP3.88□□□□□ -1.79
CSMD3-204ENST00000455883 RPL37AP61513 92 aaKnown RBP3.88□□□□□ -1.79
CSMD3-204ENST00000455883 BRD3OSQ6XYD6 125 aa3.88□□□□□ -1.79
CSMD3-204ENST00000455883 FAM19A5Q7Z5A7 132 aaPredicted RBP3.88□□□□□ -1.79
CSMD3-204ENST00000455883 GNRH2O43555 120 aa3.88□□□□□ -1.79
CSMD3-204ENST00000455883 ELOF1P60002 83 aaKnown RBP3.88□□□□□ -1.79
CSMD3-204ENST00000455883 ADORA2A-AS1P86434 159 aa3.88□□□□□ -1.79
CSMD3-204ENST00000455883 SYCNQ0VAF6 134 aa3.88□□□□□ -1.79
CSMD3-204ENST00000455883 XGP55808 180 aa3.88□□□□□ -1.79
CSMD3-204ENST00000455883 IGLV2-11P01706 119 aa3.88□□□□□ -1.79
CSMD3-204ENST00000455883 CRIP2P52943 208 aaPredicted RBP3.88□□□□□ -1.79
CSMD3-204ENST00000455883 LOC110117498A0A087WWA1 95 aa3.87□□□□□ -1.79
CSMD3-204ENST00000455883 PSMG3-AS1Q96PY0 264 aa3.87□□□□□ -1.79
CSMD3-204ENST00000455883 ZFAND3Q9H8U3 227 aa3.87□□□□□ -1.79
CSMD3-204ENST00000455883 AMELXQ99217 191 aa3.87□□□□□ -1.79
CSMD3-204ENST00000455883 LINC00208Q96KT6 92 aa3.87□□□□□ -1.79
CSMD3-204ENST00000455883 SPRY2O43597 315 aa3.87□□□□□ -1.79
CSMD3-204ENST00000455883 CHCHD10Q8WYQ3 142 aaPredicted RBP3.87□□□□□ -1.79
CSMD3-204ENST00000455883 CDKN2A-AS1Q9UH64 79 aa3.87□□□□□ -1.79
CSMD3-204ENST00000455883 IGIPA6NJ69 53 aa3.87□□□□□ -1.79
CSMD3-204ENST00000455883 SPINK2P20155 84 aa3.87□□□□□ -1.79
CSMD3-204ENST00000455883 C8orf87E5RJ46 101 aa3.86□□□□□ -1.79
CSMD3-204ENST00000455883 ATP1A1-AS1Q5TC04 95 aa3.86□□□□□ -1.79
CSMD3-204ENST00000455883 MAP6D1Q9H9H5 199 aa3.86□□□□□ -1.79
CSMD3-204ENST00000455883 IGHV3-38A0A0C4DH36 116 aa3.86□□□□□ -1.79
CSMD3-204ENST00000455883 C6orf99Q4VX62 202 aa3.86□□□□□ -1.79
CSMD3-204ENST00000455883 Q8N3U1 123 aa3.86□□□□□ -1.79
CSMD3-204ENST00000455883 TP53TG3Q9ULZ0 132 aa3.86□□□□□ -1.79
CSMD3-204ENST00000455883 IGHV4-59P01825 116 aa3.85□□□□□ -1.79
CSMD3-204ENST00000455883 MRPS12O15235 138 aaKnown RBP3.85□□□□□ -1.79
CSMD3-204ENST00000455883 DEFB113Q30KQ7 82 aa3.85□□□□□ -1.79
CSMD3-204ENST00000455883 DSPP15924 2871 aaKnown RBP3.85□□□□□ -1.79
CSMD3-204ENST00000455883 MLANAQ16655 118 aa3.85□□□□□ -1.79
CSMD3-204ENST00000455883 NUPR1O60356 82 aa3.85□□□□□ -1.79
CSMD3-204ENST00000455883 ZFP36P26651 326 aaKnown RBP3.85□□□□□ -1.79
CSMD3-204ENST00000455883 FSHBP01225 129 aa3.85□□□□□ -1.79
CSMD3-204ENST00000455883 DEFB112Q30KQ8 113 aa3.85□□□□□ -1.79
CSMD3-204ENST00000455883 C11orf45Q8TAV5 145 aa3.85□□□□□ -1.79
CSMD3-204ENST00000455883 CTSZQ9UBR2 303 aa3.85□□□□□ -1.79
CSMD3-204ENST00000455883 A0A0C4DFX4 3053 aa3.85□□□□□ -1.79
CSMD3-204ENST00000455883 LY6LH3BQJ8 138 aa3.85□□□□□ -1.79
CSMD3-204ENST00000455883 LY6G6EA0A0G2JKS1 128 aa3.84□□□□□ -1.79
CSMD3-204ENST00000455883 KLK12Q9UKR0 248 aa3.84□□□□□ -1.79
CSMD3-204ENST00000455883 U3KQA8 63 aa3.84□□□□□ -1.79
CSMD3-204ENST00000455883 TSHBP01222 138 aa3.84□□□□□ -1.79
CSMD3-204ENST00000455883 PRM2P04554 102 aa3.84□□□□□ -1.79
CSMD3-204ENST00000455883 DEFB105AQ8NG35 78 aa3.84□□□□□ -1.79
CSMD3-204ENST00000455883 TRAV10A0A0B4J240 114 aa3.84□□□□□ -1.79
CSMD3-204ENST00000455883 MPLKIPQ8TAP9 179 aa3.84□□□□□ -1.79
CSMD3-204ENST00000455883 IGLV5-45A0A087WSX0 123 aa3.84□□□□□ -1.79
CSMD3-204ENST00000455883 MOBPQ13875 183 aa3.84□□□□□ -1.79
CSMD3-204ENST00000455883 Q6ZQY7 126 aa3.84□□□□□ -1.79
CSMD3-204ENST00000455883 RNF223E7ERA6 249 aa3.84□□□□□ -1.79
CSMD3-204ENST00000455883 KALRNO60229 2985 aa3.84□□□□□ -1.79
CSMD3-204ENST00000455883 RETNLBQ9BQ08 111 aa3.84□□□□□ -1.79
CSMD3-204ENST00000455883 TMEM105Q8N8V8 129 aa3.84□□□□□ -1.8
CSMD3-204ENST00000455883 CRYGDP07320 174 aa3.84□□□□□ -1.8
CSMD3-204ENST00000455883 ACYP2P14621 99 aa3.84□□□□□ -1.8
CSMD3-204ENST00000455883 BEAN1Q3B7T3 259 aa3.84□□□□□ -1.8
CSMD3-204ENST00000455883 DEFB121Q5J5C9 76 aa3.84□□□□□ -1.8
CSMD3-204ENST00000455883 A6NDX4 124 aa3.84□□□□□ -1.8
CSMD3-204ENST00000455883 CDC42SE2Q9NRR3 84 aa3.84□□□□□ -1.8
CSMD3-204ENST00000455883 LINC00694P0DN24 101 aa3.83□□□□□ -1.8
CSMD3-204ENST00000455883 LINC00482Q8N8I6 264 aa3.83□□□□□ -1.8
CSMD3-204ENST00000455883 C1orf137Q5JT78 98 aa3.83□□□□□ -1.8
CSMD3-204ENST00000455883 MSRB1Q9NZV6 116 aa3.83□□□□□ -1.8
CSMD3-204ENST00000455883 KLKP1Q107X0 134 aa3.83□□□□□ -1.8
CSMD3-204ENST00000455883 ARTNQ5T4W7 220 aa3.83□□□□□ -1.8
CSMD3-204ENST00000455883 APRG1Q8IVJ8 170 aa3.83□□□□□ -1.8
CSMD3-204ENST00000455883 CD164Q04900 197 aa3.83□□□□□ -1.8
CSMD3-204ENST00000455883 Q8N6K4 173 aa3.83□□□□□ -1.8
CSMD3-204ENST00000455883 H3BNG1 76 aa3.83□□□□□ -1.8
CSMD3-204ENST00000455883 LINC00269Q8N2A0 174 aa3.83□□□□□ -1.8
CSMD3-204ENST00000455883 LYNX1G3V0Z9 82 aa3.83□□□□□ -1.8
CSMD3-204ENST00000455883 LYNX1P0DP58 116 aa3.83□□□□□ -1.8
CSMD3-204ENST00000455883 ATP11AUNQ6ZP68 121 aa3.83□□□□□ -1.8
CSMD3-204ENST00000455883 C1orf158Q8N1D5 194 aa3.83□□□□□ -1.8
CSMD3-204ENST00000455883 NCR3O14931 201 aa3.82□□□□□ -1.8
CSMD3-204ENST00000455883 LY6HO94772 140 aa3.82□□□□□ -1.8
CSMD3-204ENST00000455883 POM121L12Q8N7R1 296 aa3.82□□□□□ -1.8
CSMD3-204ENST00000455883 NF1P21359 2839 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms