RNA–Protein interactions for RNA: ENST00000455111.1

GPC1-206, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 841 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-206ENST00000455111 NAT8Q9UHE5 227 aa9.78□□□□□ -0.84
GPC1-206ENST00000455111 PKIGQ9Y2B9 76 aa9.78□□□□□ -0.84
GPC1-206ENST00000455111 LINC00862A6NCI5 91 aa9.77□□□□□ -0.85
GPC1-206ENST00000455111 D6R8Y8 96 aa9.77□□□□□ -0.85
GPC1-206ENST00000455111 PPP1R2P9O14990 202 aa9.77□□□□□ -0.85
GPC1-206ENST00000455111 TCAPO15273 167 aa9.77□□□□□ -0.85
GPC1-206ENST00000455111 PPP1R17O96001 155 aa9.77□□□□□ -0.85
GPC1-206ENST00000455111 RPL18AQ02543 176 aaKnown RBP9.77□□□□□ -0.85
GPC1-206ENST00000455111 RNF151Q2KHN1 245 aa9.77□□□□□ -0.85
GPC1-206ENST00000455111 CKS2P33552 79 aa9.76□□□□□ -0.85
GPC1-206ENST00000455111 KIAA0087Q14695 138 aa9.76□□□□□ -0.85
GPC1-206ENST00000455111 MRPL54Q6P161 138 aaKnown RBP9.76□□□□□ -0.85
GPC1-206ENST00000455111 C6orf48Q9UBA6 75 aa9.76□□□□□ -0.85
GPC1-206ENST00000455111 UNQ6190/PRO20217Q6UXQ8 127 aa9.75□□□□□ -0.85
GPC1-206ENST00000455111 OR10D4PQ8NGN7 298 aa9.75□□□□□ -0.85
GPC1-206ENST00000455111 ORAOV1Q8WV07 137 aa9.75□□□□□ -0.85
GPC1-206ENST00000455111 MRPL35Q9NZE8 188 aaKnown RBP9.75□□□□□ -0.85
GPC1-206ENST00000455111 MRPS36P82909 103 aaKnown RBP9.74□□□□□ -0.85
GPC1-206ENST00000455111 C1orf137Q5JT78 98 aa9.74□□□□□ -0.85
GPC1-206ENST00000455111 TLX1NBP0CAT3 122 aa9.72□□□□□ -0.85
GPC1-206ENST00000455111 SPANXA1Q9NS26 97 aa9.72□□□□□ -0.85
GPC1-206ENST00000455111 IGLV4-3A0A075B6K6 122 aa9.71□□□□□ -0.86
GPC1-206ENST00000455111 A0A1B0GW15 77 aa9.71□□□□□ -0.86
GPC1-206ENST00000455111 MT-ND6P03923 174 aa9.71□□□□□ -0.86
GPC1-206ENST00000455111 IGLV7-43P04211 117 aa9.71□□□□□ -0.86
GPC1-206ENST00000455111 HBBP68871 147 aa9.71□□□□□ -0.86
GPC1-206ENST00000455111 LINC00242Q5T6M2 205 aa9.71□□□□□ -0.86
GPC1-206ENST00000455111 ZC2HC1BQ5TFG8 222 aa9.71□□□□□ -0.86
GPC1-206ENST00000455111 PRR26Q8N8Z3 221 aa9.71□□□□□ -0.86
GPC1-206ENST00000455111 TMEM18Q96B42 140 aa9.71□□□□□ -0.86
GPC1-206ENST00000455111 IFITM10A6NMD0 228 aa9.7□□□□□ -0.86
GPC1-206ENST00000455111 KRTAP1-4P0C5Y4 121 aa9.7□□□□□ -0.86
GPC1-206ENST00000455111 SMAGPQ0VAQ4 97 aa9.7□□□□□ -0.86
GPC1-206ENST00000455111 LINC00173Q6ZV60 143 aa9.69□□□□□ -0.86
GPC1-206ENST00000455111 SMDT1Q9H4I9 107 aa9.69□□□□□ -0.86
GPC1-206ENST00000455111 A0A087WZ39 114 aa9.68□□□□□ -0.86
GPC1-206ENST00000455111 NDUFA1O15239 70 aa9.68□□□□□ -0.86
GPC1-206ENST00000455111 PEA15Q15121 130 aa9.68□□□□□ -0.86
GPC1-206ENST00000455111 C9orf129Q5T035 196 aaKnown RBP9.68□□□□□ -0.86
GPC1-206ENST00000455111 C2orf82Q6UX34 121 aa9.68□□□□□ -0.86
GPC1-206ENST00000455111 FAM19A5Q7Z5A7 132 aaPredicted RBP9.68□□□□□ -0.86
GPC1-206ENST00000455111 PRSS47A8MTI9 375 aa9.67□□□□□ -0.86
GPC1-206ENST00000455111 GAGE2EQ4V326 116 aa9.67□□□□□ -0.86
GPC1-206ENST00000455111 GAGE2DQ9UEU5 116 aa9.67□□□□□ -0.86
GPC1-206ENST00000455111 PYGO1Q9Y3Y4 419 aa9.67□□□□□ -0.86
GPC1-206ENST00000455111 F8WDY8 70 aa9.66□□□□□ -0.86
GPC1-206ENST00000455111 TMEM136Q6ZRR5 245 aa9.66□□□□□ -0.86
GPC1-206ENST00000455111 PRELID3AQ96N28 172 aa9.66□□□□□ -0.86
GPC1-206ENST00000455111 F8W036 122 aa9.65□□□□□ -0.86
GPC1-206ENST00000455111 H0Y9J4 135 aa9.65□□□□□ -0.86
GPC1-206ENST00000455111 PPBPP02775 128 aa9.65□□□□□ -0.86
GPC1-206ENST00000455111 UBE2D1P51668 147 aa9.65□□□□□ -0.86
GPC1-206ENST00000455111 ORMDL3Q8N138 153 aa9.65□□□□□ -0.86
GPC1-206ENST00000455111 IMMP2LQ96T52 175 aa9.65□□□□□ -0.86
GPC1-206ENST00000455111 LOC389332A0A1B0GUA5 103 aa9.63□□□□□ -0.87
GPC1-206ENST00000455111 IFI27P40305 119 aaPredicted RBP9.63□□□□□ -0.87
GPC1-206ENST00000455111 AMELXQ99217 191 aa9.63□□□□□ -0.87
GPC1-206ENST00000455111 TGIF2-C20orf24A0A0A6YYL0 155 aa9.62□□□□□ -0.87
GPC1-206ENST00000455111 S100A8P05109 93 aa9.62□□□□□ -0.87
GPC1-206ENST00000455111 ATP5L2Q7Z4Y8 100 aa9.62□□□□□ -0.87
GPC1-206ENST00000455111 DIRC1Q969H9 104 aa9.62□□□□□ -0.87
GPC1-206ENST00000455111 TMEM141Q96I45 108 aa9.62□□□□□ -0.87
GPC1-206ENST00000455111 M0QXV9 152 aa9.61□□□□□ -0.87
GPC1-206ENST00000455111 MUC2Q02817 5179 aa9.6□□□□□ -0.87
GPC1-206ENST00000455111 TRBV30A0A0K0K1B3 111 aa9.6□□□□□ -0.87
GPC1-206ENST00000455111 IGIPA6NJ69 53 aa9.6□□□□□ -0.87
GPC1-206ENST00000455111 C2orf66Q6UXQ4 117 aa9.6□□□□□ -0.87
GPC1-206ENST00000455111 NDUFC2-KCTD14E9PQ53 114 aa9.59□□□□□ -0.87
GPC1-206ENST00000455111 RAB5AP20339 215 aa9.59□□□□□ -0.87
GPC1-206ENST00000455111 FAM19A3Q7Z5A8 133 aa9.59□□□□□ -0.87
GPC1-206ENST00000455111 Q8N8P6 123 aa9.59□□□□□ -0.87
GPC1-206ENST00000455111 TEX43Q6ZNM6 134 aa9.58□□□□□ -0.88
GPC1-206ENST00000455111 LINC01561Q8N1V8 128 aa9.58□□□□□ -0.88
GPC1-206ENST00000455111 LINC00469Q8N7U9 141 aa9.57□□□□□ -0.88
GPC1-206ENST00000455111 MAP1LC3AQ9H492 121 aa9.57□□□□□ -0.88
GPC1-206ENST00000455111 LAMTOR2Q9Y2Q5 125 aa9.56□□□□□ -0.88
GPC1-206ENST00000455111 IGLV1-50A0A075B6I6 118 aa9.55□□□□□ -0.88
GPC1-206ENST00000455111 UBE2BP63146 152 aa9.55□□□□□ -0.88
GPC1-206ENST00000455111 CDKN2A-AS1Q9UH64 79 aa9.55□□□□□ -0.88
GPC1-206ENST00000455111 CYSLTR1Q9Y271 337 aa9.55□□□□□ -0.88
GPC1-206ENST00000455111 XAGE1AQ9HD64 81 aa9.54□□□□□ -0.88
GPC1-206ENST00000455111 C22orf24Q9Y442 160 aa9.54□□□□□ -0.88
GPC1-206ENST00000455111 Q6ZN92 141 aa9.53□□□□□ -0.88
GPC1-206ENST00000455111 Q8IZM0 81 aa9.53□□□□□ -0.88
GPC1-206ENST00000455111 PACRGQ96M98 296 aaPredicted RBP9.53□□□□□ -0.88
GPC1-206ENST00000455111 TOMM7Q9P0U1 55 aa9.53□□□□□ -0.88
GPC1-206ENST00000455111 ANAPC16Q96DE5 110 aa9.52□□□□□ -0.89
GPC1-206ENST00000455111 VCX2Q9H322 139 aa9.52□□□□□ -0.89
GPC1-206ENST00000455111 ZNF861PO60384 105 aa9.51□□□□□ -0.89
GPC1-206ENST00000455111 ADCYAP1P18509 176 aa9.51□□□□□ -0.89
GPC1-206ENST00000455111 KIAA1644Q3SXP7 199 aa9.51□□□□□ -0.89
GPC1-206ENST00000455111 ORMDL2Q53FV1 153 aa9.51□□□□□ -0.89
GPC1-206ENST00000455111 C2orf88Q9BSF0 95 aa9.51□□□□□ -0.89
GPC1-206ENST00000455111 NPSP0C0P6 89 aa9.5□□□□□ -0.89
GPC1-206ENST00000455111 PNRC1Q12796 327 aaPredicted RBP9.5□□□□□ -0.89
GPC1-206ENST00000455111 A0A087X002 238 aa9.49□□□□□ -0.89
GPC1-206ENST00000455111 SMIM1B2RUZ4 78 aa9.49□□□□□ -0.89
GPC1-206ENST00000455111 TOMM6Q96B49 74 aa9.49□□□□□ -0.89
GPC1-206ENST00000455111 ALKBH7Q9BT30 221 aaPredicted RBP9.49□□□□□ -0.89
GPC1-206ENST00000455111 MT-ND4LP03901 98 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms