RNA–Protein interactions for RNA: ENST00000453341.1

TNFRSF25-208, Transcript of TNF receptor superfamily member 25, humanhuman

TSL 1 (best)

Gene TNFRSF25, Length 798 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25-208ENST00000453341 IMMP2LQ96T52 175 aa12.84□□□□□ -0.35
TNFRSF25-208ENST00000453341 NAT8Q9UHE5 227 aa12.84□□□□□ -0.35
TNFRSF25-208ENST00000453341 UBE2D4Q9Y2X8 147 aa12.84□□□□□ -0.35
TNFRSF25-208ENST00000453341 OR10D4PQ8NGN7 298 aa12.83□□□□□ -0.36
TNFRSF25-208ENST00000453341 CSDC2Q9Y534 153 aaKnown RBP12.83□□□□□ -0.36
TNFRSF25-208ENST00000453341 M0QXV9 152 aa12.82□□□□□ -0.36
TNFRSF25-208ENST00000453341 TLX1NBP0CAT3 122 aa12.82□□□□□ -0.36
TNFRSF25-208ENST00000453341 UBE2BP63146 152 aa12.82□□□□□ -0.36
TNFRSF25-208ENST00000453341 Q6ZUT4 128 aa12.82□□□□□ -0.36
TNFRSF25-208ENST00000453341 GAGE2EQ4V326 116 aa12.81□□□□□ -0.36
TNFRSF25-208ENST00000453341 ORAOV1Q8WV07 137 aa12.81□□□□□ -0.36
TNFRSF25-208ENST00000453341 TMEM191AQ9H0A3 160 aa12.81□□□□□ -0.36
TNFRSF25-208ENST00000453341 C6orf48Q9UBA6 75 aa12.81□□□□□ -0.36
TNFRSF25-208ENST00000453341 GAGE2DQ9UEU5 116 aa12.81□□□□□ -0.36
TNFRSF25-208ENST00000453341 UNQ6190/PRO20217Q6UXQ8 127 aa12.8□□□□□ -0.36
TNFRSF25-208ENST00000453341 AMN1Q8IY45 258 aa12.8□□□□□ -0.36
TNFRSF25-208ENST00000453341 SMDT1Q9H4I9 107 aa12.8□□□□□ -0.36
TNFRSF25-208ENST00000453341 NDUFA1O15239 70 aa12.79□□□□□ -0.36
TNFRSF25-208ENST00000453341 RAB4AP20338 218 aa12.79□□□□□ -0.36
TNFRSF25-208ENST00000453341 RIGQ13278 110 aa12.79□□□□□ -0.36
TNFRSF25-208ENST00000453341 NAT8BQ9UHF3 227 aa12.78□□□□□ -0.36
TNFRSF25-208ENST00000453341 A0A087X002 238 aa12.77□□□□□ -0.37
TNFRSF25-208ENST00000453341 SMIM27A0A1W2PRY6 76 aa12.77□□□□□ -0.37
TNFRSF25-208ENST00000453341 F8WDY8 70 aa12.77□□□□□ -0.37
TNFRSF25-208ENST00000453341 SMKR1H3BMG3 65 aa12.77□□□□□ -0.37
TNFRSF25-208ENST00000453341 ZNF861PO60384 105 aa12.77□□□□□ -0.37
TNFRSF25-208ENST00000453341 FCER1GP30273 86 aa12.76□□□□□ -0.37
TNFRSF25-208ENST00000453341 IGHV3OR16-9A0A0B4J2B5 98 aa12.74□□□□□ -0.37
TNFRSF25-208ENST00000453341 VCYO14598 125 aa12.74□□□□□ -0.37
TNFRSF25-208ENST00000453341 C9orf129Q5T035 196 aaKnown RBP12.73□□□□□ -0.37
TNFRSF25-208ENST00000453341 FAM104AQ969W3 186 aa12.73□□□□□ -0.37
TNFRSF25-208ENST00000453341 RAB14P61106 215 aa12.72□□□□□ -0.37
TNFRSF25-208ENST00000453341 SMAGPQ0VAQ4 97 aa12.72□□□□□ -0.37
TNFRSF25-208ENST00000453341 RETNLBQ9BQ08 111 aa12.72□□□□□ -0.37
TNFRSF25-208ENST00000453341 TIMM21Q9BVV7 248 aa12.71□□□□□ -0.37
TNFRSF25-208ENST00000453341 MRPL51Q4U2R6 128 aaKnown RBP12.7□□□□□ -0.38
TNFRSF25-208ENST00000453341 FAM104BQ5XKR9 115 aa12.7□□□□□ -0.38
TNFRSF25-208ENST00000453341 MRPL54Q6P161 138 aaKnown RBP12.7□□□□□ -0.38
TNFRSF25-208ENST00000453341 NRACQ8N912 160 aa12.7□□□□□ -0.38
TNFRSF25-208ENST00000453341 KIAA0087Q14695 138 aa12.69□□□□□ -0.38
TNFRSF25-208ENST00000453341 LCE2DQ5TA82 110 aaPredicted RBP12.69□□□□□ -0.38
TNFRSF25-208ENST00000453341 TYMSOSQ8TAI1 123 aa12.69□□□□□ -0.38
TNFRSF25-208ENST00000453341 SUMO2P61956 95 aaKnown RBP12.68□□□□□ -0.38
TNFRSF25-208ENST00000453341 KIR2DL4Q99706 377 aa12.68□□□□□ -0.38
TNFRSF25-208ENST00000453341 CDIP1Q9H305 208 aa12.67□□□□□ -0.38
TNFRSF25-208ENST00000453341 CRCT1Q9UGL9 99 aa12.67□□□□□ -0.38
TNFRSF25-208ENST00000453341 NDUFC2-KCTD14E9PQ53 114 aa12.66□□□□□ -0.38
TNFRSF25-208ENST00000453341 CRYGAP11844 174 aa12.66□□□□□ -0.38
TNFRSF25-208ENST00000453341 RPL39P62891 51 aaKnown RBP12.66□□□□□ -0.38
TNFRSF25-208ENST00000453341 A0A1B0GW15 77 aa12.65□□□□□ -0.38
TNFRSF25-208ENST00000453341 A0A1B0GXF2 115 aa12.65□□□□□ -0.38
TNFRSF25-208ENST00000453341 HBBP68871 147 aa12.65□□□□□ -0.38
TNFRSF25-208ENST00000453341 IFITM2Q01629 132 aa12.65□□□□□ -0.38
TNFRSF25-208ENST00000453341 TPRXLQ17RH7 258 aa12.65□□□□□ -0.38
TNFRSF25-208ENST00000453341 CLLU1Q5K131 121 aa12.65□□□□□ -0.38
TNFRSF25-208ENST00000453341 C2orf82Q6UX34 121 aa12.65□□□□□ -0.38
TNFRSF25-208ENST00000453341 CTDSP1Q9GZU7 261 aa12.65□□□□□ -0.38
TNFRSF25-208ENST00000453341 TRBV30A0A0K0K1B3 111 aa12.64□□□□□ -0.39
TNFRSF25-208ENST00000453341 NUPR1O60356 82 aa12.64□□□□□ -0.39
TNFRSF25-208ENST00000453341 PPP1R17O96001 155 aa12.64□□□□□ -0.39
TNFRSF25-208ENST00000453341 TMEM18Q96B42 140 aa12.64□□□□□ -0.39
TNFRSF25-208ENST00000453341 ANAPC11Q9NYG5 84 aa12.64□□□□□ -0.39
TNFRSF25-208ENST00000453341 CKS2P33552 79 aa12.63□□□□□ -0.39
TNFRSF25-208ENST00000453341 LINC00862A6NCI5 91 aa12.62□□□□□ -0.39
TNFRSF25-208ENST00000453341 PPP1R2P9O14990 202 aa12.62□□□□□ -0.39
TNFRSF25-208ENST00000453341 KRTAP13-2Q52LG2 175 aa12.62□□□□□ -0.39
TNFRSF25-208ENST00000453341 C22orf24Q9Y442 160 aa12.62□□□□□ -0.39
TNFRSF25-208ENST00000453341 IFITM10A6NMD0 228 aa12.61□□□□□ -0.39
TNFRSF25-208ENST00000453341 D6R8Y8 96 aa12.61□□□□□ -0.39
TNFRSF25-208ENST00000453341 TNFRSF6BO95407 300 aa12.61□□□□□ -0.39
TNFRSF25-208ENST00000453341 S100A8P05109 93 aa12.61□□□□□ -0.39
TNFRSF25-208ENST00000453341 PNRC1Q12796 327 aaPredicted RBP12.61□□□□□ -0.39
TNFRSF25-208ENST00000453341 TRBV24-1A0A075B6N3 115 aa12.6□□□□□ -0.39
TNFRSF25-208ENST00000453341 F8W036 122 aa12.6□□□□□ -0.39
TNFRSF25-208ENST00000453341 NPYP01303 97 aa12.59□□□□□ -0.39
TNFRSF25-208ENST00000453341 MRPS36P82909 103 aaKnown RBP12.59□□□□□ -0.39
TNFRSF25-208ENST00000453341 C20orf78Q9BR46 151 aa12.59□□□□□ -0.39
TNFRSF25-208ENST00000453341 IGLV7-46A0A075B6I9 117 aa12.58□□□□□ -0.4
TNFRSF25-208ENST00000453341 TGIF2-C20orf24A0A0A6YYL0 155 aa12.58□□□□□ -0.4
TNFRSF25-208ENST00000453341 MT-ND4LP03901 98 aa12.58□□□□□ -0.4
TNFRSF25-208ENST00000453341 ANAPC16Q96DE5 110 aa12.58□□□□□ -0.4
TNFRSF25-208ENST00000453341 SPANXA1Q9NS26 97 aa12.58□□□□□ -0.4
TNFRSF25-208ENST00000453341 RPL28P46779 137 aaKnown RBP12.57□□□□□ -0.4
TNFRSF25-208ENST00000453341 ATP5L2Q7Z4Y8 100 aa12.57□□□□□ -0.4
TNFRSF25-208ENST00000453341 LINC00469Q8N7U9 141 aa12.57□□□□□ -0.4
TNFRSF25-208ENST00000453341 PACRGQ96M98 296 aaPredicted RBP12.57□□□□□ -0.4
TNFRSF25-208ENST00000453341 BCE1O60756 84 aa12.56□□□□□ -0.4
TNFRSF25-208ENST00000453341 ADCYAP1P18509 176 aa12.56□□□□□ -0.4
TNFRSF25-208ENST00000453341 SMIM2Q9BVW6 85 aa12.56□□□□□ -0.4
TNFRSF25-208ENST00000453341 RPL32P62910 135 aaKnown RBP12.55□□□□□ -0.4
TNFRSF25-208ENST00000453341 LINC00242Q5T6M2 205 aa12.55□□□□□ -0.4
TNFRSF25-208ENST00000453341 LINC00173Q6ZV60 143 aa12.55□□□□□ -0.4
TNFRSF25-208ENST00000453341 LINC00304Q8N9R0 145 aa12.55□□□□□ -0.4
TNFRSF25-208ENST00000453341 TCAPO15273 167 aa12.54□□□□□ -0.4
TNFRSF25-208ENST00000453341 PPBPP02775 128 aa12.54□□□□□ -0.4
TNFRSF25-208ENST00000453341 LBHQ53QV2 105 aaPredicted RBP12.54□□□□□ -0.4
TNFRSF25-208ENST00000453341 TMEM136Q6ZRR5 245 aa12.54□□□□□ -0.4
TNFRSF25-208ENST00000453341 ORMDL3Q8N138 153 aa12.53□□□□□ -0.4
TNFRSF25-208ENST00000453341 PRELID3AQ96N28 172 aa12.53□□□□□ -0.4
TNFRSF25-208ENST00000453341 XAGE1AQ9HD64 81 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms