RNA–Protein interactions for RNA: ENST00000453259.2

LYSMD3-202, Transcript of LysM domain containing 3, humanhuman

TSL 3

Gene LYSMD3, Length 553 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-202ENST00000453259 FAM168BA1KXE4 195 aa8.54□□□□□ -1.04
LYSMD3-202ENST00000453259 M0QXV9 152 aa8.54□□□□□ -1.04
LYSMD3-202ENST00000453259 RPL32P62910 135 aaKnown RBP8.54□□□□□ -1.04
LYSMD3-202ENST00000453259 UBE2BP63146 152 aa8.54□□□□□ -1.04
LYSMD3-202ENST00000453259 FAM19A5Q7Z5A7 132 aaPredicted RBP8.54□□□□□ -1.04
LYSMD3-202ENST00000453259 AMN1Q8IY45 258 aa8.54□□□□□ -1.04
LYSMD3-202ENST00000453259 SPANXA1Q9NS26 97 aa8.54□□□□□ -1.04
LYSMD3-202ENST00000453259 TRBV30A0A0K0K1B3 111 aa8.53□□□□□ -1.04
LYSMD3-202ENST00000453259 RNASE13Q5GAN3 156 aaKnown RBP8.53□□□□□ -1.04
LYSMD3-202ENST00000453259 SLC51BQ86UW2 128 aa8.53□□□□□ -1.04
LYSMD3-202ENST00000453259 KRTAP11-1Q8IUC1 163 aa8.53□□□□□ -1.04
LYSMD3-202ENST00000453259 NRACQ8N912 160 aa8.53□□□□□ -1.04
LYSMD3-202ENST00000453259 C20orf78Q9BR46 151 aa8.53□□□□□ -1.04
LYSMD3-202ENST00000453259 LINC00862A6NCI5 91 aa8.52□□□□□ -1.05
LYSMD3-202ENST00000453259 MRPS36P82909 103 aaKnown RBP8.52□□□□□ -1.05
LYSMD3-202ENST00000453259 RIGQ13278 110 aa8.52□□□□□ -1.05
LYSMD3-202ENST00000453259 C6orf48Q9UBA6 75 aa8.52□□□□□ -1.05
LYSMD3-202ENST00000453259 NDUFC2-KCTD14E9PQ53 114 aa8.51□□□□□ -1.05
LYSMD3-202ENST00000453259 NUPR1O60356 82 aa8.51□□□□□ -1.05
LYSMD3-202ENST00000453259 ZNF861PO60384 105 aa8.51□□□□□ -1.05
LYSMD3-202ENST00000453259 OSTCQ9NRP0 149 aa8.51□□□□□ -1.05
LYSMD3-202ENST00000453259 TRBV24-1A0A075B6N3 115 aa8.5□□□□□ -1.05
LYSMD3-202ENST00000453259 TGIF2-C20orf24A0A0A6YYL0 155 aa8.5□□□□□ -1.05
LYSMD3-202ENST00000453259 HBBP68871 147 aa8.5□□□□□ -1.05
LYSMD3-202ENST00000453259 GAGE2EQ4V326 116 aa8.5□□□□□ -1.05
LYSMD3-202ENST00000453259 C10orf25Q5T742 122 aa8.5□□□□□ -1.05
LYSMD3-202ENST00000453259 UNQ6190/PRO20217Q6UXQ8 127 aa8.5□□□□□ -1.05
LYSMD3-202ENST00000453259 GAGE2DQ9UEU5 116 aa8.5□□□□□ -1.05
LYSMD3-202ENST00000453259 KRTAP9-6A0A140TA67 174 aa8.49□□□□□ -1.05
LYSMD3-202ENST00000453259 LINC01551Q86U37 167 aa8.49□□□□□ -1.05
LYSMD3-202ENST00000453259 KRTAP7-1Q8IUC3 87 aa8.49□□□□□ -1.05
LYSMD3-202ENST00000453259 IFITM10A6NMD0 228 aa8.48□□□□□ -1.05
LYSMD3-202ENST00000453259 SMKR1H3BMG3 65 aa8.48□□□□□ -1.05
LYSMD3-202ENST00000453259 SMIM7Q9BQ49 75 aa8.48□□□□□ -1.05
LYSMD3-202ENST00000453259 A0A1B0GW15 77 aa8.47□□□□□ -1.05
LYSMD3-202ENST00000453259 BLOC1S1P78537 153 aa8.47□□□□□ -1.05
LYSMD3-202ENST00000453259 KIAA0087Q14695 138 aa8.47□□□□□ -1.05
LYSMD3-202ENST00000453259 FAM104BQ5XKR9 115 aa8.47□□□□□ -1.05
LYSMD3-202ENST00000453259 LINC01561Q8N1V8 128 aa8.47□□□□□ -1.05
LYSMD3-202ENST00000453259 PACRGQ96M98 296 aaPredicted RBP8.47□□□□□ -1.05
LYSMD3-202ENST00000453259 NAT8BQ9UHF3 227 aa8.47□□□□□ -1.05
LYSMD3-202ENST00000453259 LBHQ53QV2 105 aaPredicted RBP8.46□□□□□ -1.06
LYSMD3-202ENST00000453259 FAM104AQ969W3 186 aa8.46□□□□□ -1.06
LYSMD3-202ENST00000453259 FAT4Q6V0I7 4981 aa8.46□□□□□ -1.06
LYSMD3-202ENST00000453259 RPL39P62891 51 aaKnown RBP8.45□□□□□ -1.06
LYSMD3-202ENST00000453259 MRPL51Q4U2R6 128 aaKnown RBP8.45□□□□□ -1.06
LYSMD3-202ENST00000453259 SMIM2Q9BVW6 85 aa8.45□□□□□ -1.06
LYSMD3-202ENST00000453259 CRYGAP11844 174 aa8.44□□□□□ -1.06
LYSMD3-202ENST00000453259 CKS2P33552 79 aa8.44□□□□□ -1.06
LYSMD3-202ENST00000453259 IFI27P40305 119 aaPredicted RBP8.44□□□□□ -1.06
LYSMD3-202ENST00000453259 RPL28P46779 137 aaKnown RBP8.44□□□□□ -1.06
LYSMD3-202ENST00000453259 CTAG1AP78358 180 aa8.44□□□□□ -1.06
LYSMD3-202ENST00000453259 C9orf129Q5T035 196 aaKnown RBP8.44□□□□□ -1.06
LYSMD3-202ENST00000453259 TCTE3Q8IZS6 198 aa8.44□□□□□ -1.06
LYSMD3-202ENST00000453259 PYGO1Q9Y3Y4 419 aa8.44□□□□□ -1.06
LYSMD3-202ENST00000453259 V9GYV3 84 aa8.44□□□□□ -1.06
LYSMD3-202ENST00000453259 ZNF727A8MUV8 499 aa8.43□□□□□ -1.06
LYSMD3-202ENST00000453259 S100A8P05109 93 aa8.43□□□□□ -1.06
LYSMD3-202ENST00000453259 CEBPGP53567 150 aa8.43□□□□□ -1.06
LYSMD3-202ENST00000453259 TP73-AS1Q9UF72 201 aa8.43□□□□□ -1.06
LYSMD3-202ENST00000453259 TNFRSF6BO95407 300 aa8.42□□□□□ -1.06
LYSMD3-202ENST00000453259 TSPAN13O95857 204 aa8.42□□□□□ -1.06
LYSMD3-202ENST00000453259 PPBPP02775 128 aa8.42□□□□□ -1.06
LYSMD3-202ENST00000453259 LINC00242Q5T6M2 205 aa8.42□□□□□ -1.06
LYSMD3-202ENST00000453259 TYMSOSQ8TAI1 123 aa8.42□□□□□ -1.06
LYSMD3-202ENST00000453259 FAM74A3Q4VXF1 159 aa8.41□□□□□ -1.06
LYSMD3-202ENST00000453259 F8W036 122 aa8.4□□□□□ -1.06
LYSMD3-202ENST00000453259 BCE1O60756 84 aa8.4□□□□□ -1.06
LYSMD3-202ENST00000453259 TPRXLQ17RH7 258 aa8.4□□□□□ -1.06
LYSMD3-202ENST00000453259 C2orf82Q6UX34 121 aa8.4□□□□□ -1.06
LYSMD3-202ENST00000453259 CTDSP1Q9GZU7 261 aa8.4□□□□□ -1.06
LYSMD3-202ENST00000453259 EIF5A2Q9GZV4 153 aaKnown RBP8.4□□□□□ -1.06
LYSMD3-202ENST00000453259 C22orf24Q9Y442 160 aa8.4□□□□□ -1.06
LYSMD3-202ENST00000453259 A0A087X002 238 aa8.39□□□□□ -1.07
LYSMD3-202ENST00000453259 PRSS2P07478 247 aa8.39□□□□□ -1.07
LYSMD3-202ENST00000453259 RAB5AP20339 215 aa8.39□□□□□ -1.07
LYSMD3-202ENST00000453259 CKS1BP61024 79 aa8.39□□□□□ -1.07
LYSMD3-202ENST00000453259 TMEM141Q96I45 108 aa8.39□□□□□ -1.07
LYSMD3-202ENST00000453259 C2orf88Q9BSF0 95 aa8.39□□□□□ -1.07
LYSMD3-202ENST00000453259 SMIM27A0A1W2PRY6 76 aa8.38□□□□□ -1.07
LYSMD3-202ENST00000453259 NPSP0C0P6 89 aa8.38□□□□□ -1.07
LYSMD3-202ENST00000453259 TEX43Q6ZNM6 134 aa8.38□□□□□ -1.07
LYSMD3-202ENST00000453259 Q8IZM0 81 aa8.38□□□□□ -1.07
LYSMD3-202ENST00000453259 IGLV4-3A0A075B6K6 122 aa8.37□□□□□ -1.07
LYSMD3-202ENST00000453259 D6R8Y8 96 aa8.37□□□□□ -1.07
LYSMD3-202ENST00000453259 FAM229BQ4G0N7 80 aa8.37□□□□□ -1.07
LYSMD3-202ENST00000453259 Q6ZN92 141 aa8.37□□□□□ -1.07
LYSMD3-202ENST00000453259 MRPL55Q7Z7F7 128 aaKnown RBP8.37□□□□□ -1.07
LYSMD3-202ENST00000453259 ALKAL2Q6UX46 152 aa8.36□□□□□ -1.07
LYSMD3-202ENST00000453259 CDIP1Q9H305 208 aa8.36□□□□□ -1.07
LYSMD3-202ENST00000453259 NPYP01303 97 aa8.35□□□□□ -1.07
LYSMD3-202ENST00000453259 SRP19P09132 144 aaKnown RBP8.35□□□□□ -1.07
LYSMD3-202ENST00000453259 C6orf226Q5I0X4 101 aa8.35□□□□□ -1.07
LYSMD3-202ENST00000453259 ORMDL3Q8N138 153 aa8.35□□□□□ -1.07
LYSMD3-202ENST00000453259 F8VRH5 84 aa8.34□□□□□ -1.07
LYSMD3-202ENST00000453259 CXCL5P42830 114 aa8.34□□□□□ -1.07
LYSMD3-202ENST00000453259 SEC11AP67812 179 aa8.34□□□□□ -1.07
LYSMD3-202ENST00000453259 FAM19A3Q7Z5A8 133 aa8.34□□□□□ -1.07
LYSMD3-202ENST00000453259 LAMTOR2Q9Y2Q5 125 aa8.34□□□□□ -1.07
LYSMD3-202ENST00000453259 PRSS47A8MTI9 375 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms