RNA–Protein interactions for RNA: ENST00000452182.1

SCN9A-204, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-204ENST00000452182 FAM19A3Q7Z5A8 133 aa7.7□□□□□ -1.18
SCN9A-204ENST00000452182 PACRGQ96M98 296 aaPredicted RBP7.7□□□□□ -1.18
SCN9A-204ENST00000452182 PSCAO43653 123 aa7.69□□□□□ -1.18
SCN9A-204ENST00000452182 UBE2D1P51668 147 aa7.69□□□□□ -1.18
SCN9A-204ENST00000452182 CD164L2Q6UWJ8 174 aa7.69□□□□□ -1.18
SCN9A-204ENST00000452182 LINC00336Q6ZUF6 198 aa7.69□□□□□ -1.18
SCN9A-204ENST00000452182 IFI27L1Q96BM0 104 aa7.69□□□□□ -1.18
SCN9A-204ENST00000452182 CST9LQ9H4G1 147 aa7.69□□□□□ -1.18
SCN9A-204ENST00000452182 HSPB8Q9UJY1 196 aa7.69□□□□□ -1.18
SCN9A-204ENST00000452182 DNAH17Q9UFH2 4485 aa7.69□□□□□ -1.18
SCN9A-204ENST00000452182 ZC2HC1BQ5TFG8 222 aa7.68□□□□□ -1.18
SCN9A-204ENST00000452182 MAPKAPK5-AS1Q8N8E1 139 aa7.68□□□□□ -1.18
SCN9A-204ENST00000452182 S100A6P06703 90 aa7.67□□□□□ -1.18
SCN9A-204ENST00000452182 XCL1P47992 114 aa7.67□□□□□ -1.18
SCN9A-204ENST00000452182 SEC11AP67812 179 aa7.67□□□□□ -1.18
SCN9A-204ENST00000452182 FOXI1Q12951 378 aa7.67□□□□□ -1.18
SCN9A-204ENST00000452182 LINC00242Q5T6M2 205 aa7.67□□□□□ -1.18
SCN9A-204ENST00000452182 TRAV12-1A0A0B4J245 112 aa7.67□□□□□ -1.18
SCN9A-204ENST00000452182 IGHV3OR16-9A0A0B4J2B5 98 aa7.67□□□□□ -1.18
SCN9A-204ENST00000452182 LRCOL1A6NCL2 159 aa7.67□□□□□ -1.18
SCN9A-204ENST00000452182 GAGE12HA6NDE8 117 aa7.67□□□□□ -1.18
SCN9A-204ENST00000452182 PRSS29PA6NIE9 313 aa7.67□□□□□ -1.18
SCN9A-204ENST00000452182 PRSS1P07477 247 aa7.67□□□□□ -1.18
SCN9A-204ENST00000452182 FAT2Q9NYQ8 4349 aa7.66□□□□□ -1.18
SCN9A-204ENST00000452182 FABP4P15090 132 aa7.66□□□□□ -1.18
SCN9A-204ENST00000452182 TINCRA0A1B0GVN0 87 aa7.65□□□□□ -1.18
SCN9A-204ENST00000452182 HERVK_113P63121 156 aa7.65□□□□□ -1.18
SCN9A-204ENST00000452182 A0A087WTM6 91 aa7.64□□□□□ -1.19
SCN9A-204ENST00000452182 C5orf52A6NGY3 159 aa7.64□□□□□ -1.19
SCN9A-204ENST00000452182 COX7A2LO14548 114 aa7.64□□□□□ -1.19
SCN9A-204ENST00000452182 HIST3H2BBQ8N257 126 aa7.64□□□□□ -1.19
SCN9A-204ENST00000452182 IGLV5-45A0A087WSX0 123 aa7.63□□□□□ -1.19
SCN9A-204ENST00000452182 A0A0J9YXV3 536 aa7.63□□□□□ -1.19
SCN9A-204ENST00000452182 IGLC3P0DOY3 106 aa7.63□□□□□ -1.19
SCN9A-204ENST00000452182 COX6A2Q02221 97 aa7.63□□□□□ -1.19
SCN9A-204ENST00000452182 SPATA12Q7Z6I5 190 aa7.63□□□□□ -1.19
SCN9A-204ENST00000452182 MAP1LC3CQ9BXW4 147 aa7.63□□□□□ -1.19
SCN9A-204ENST00000452182 GEMIN7Q9H840 131 aaKnown RBP7.63□□□□□ -1.19
SCN9A-204ENST00000452182 IGLV4-69A0A075B6H9 119 aa7.63□□□□□ -1.19
SCN9A-204ENST00000452182 A0A087WZ39 114 aa7.63□□□□□ -1.19
SCN9A-204ENST00000452182 USP17L23D6RBM5 183 aa7.63□□□□□ -1.19
SCN9A-204ENST00000452182 SNRPEP62304 92 aaKnown RBP7.63□□□□□ -1.19
SCN9A-204ENST00000452182 CFAP161Q6P656 301 aa7.63□□□□□ -1.19
SCN9A-204ENST00000452182 LINC01561Q8N1V8 128 aa7.63□□□□□ -1.19
SCN9A-204ENST00000452182 F8VRH5 84 aa7.62□□□□□ -1.19
SCN9A-204ENST00000452182 S100A2P29034 98 aa7.62□□□□□ -1.19
SCN9A-204ENST00000452182 WFDC2Q14508 124 aa7.62□□□□□ -1.19
SCN9A-204ENST00000452182 ODF1Q14990 250 aa7.62□□□□□ -1.19
SCN9A-204ENST00000452182 C14orf177Q52M58 125 aa7.62□□□□□ -1.19
SCN9A-204ENST00000452182 C5orf38Q86SI9 138 aa7.62□□□□□ -1.19
SCN9A-204ENST00000452182 CHTOPQ9Y3Y2 248 aaKnown RBP7.62□□□□□ -1.19
SCN9A-204ENST00000452182 IGHV1-58A0A0C4DH39 117 aa7.61□□□□□ -1.19
SCN9A-204ENST00000452182 SYS1-DBNDD2H3BUS1 97 aa7.61□□□□□ -1.19
SCN9A-204ENST00000452182 MALP21145 153 aa7.61□□□□□ -1.19
SCN9A-204ENST00000452182 C15orf56Q8N910 161 aa7.61□□□□□ -1.19
SCN9A-204ENST00000452182 HIST1H2BLQ99880 126 aa7.61□□□□□ -1.19
SCN9A-204ENST00000452182 CHAC1Q9BUX1 264 aa7.61□□□□□ -1.19
SCN9A-204ENST00000452182 CDKN2A-AS1Q9UH64 79 aa7.61□□□□□ -1.19
SCN9A-204ENST00000452182 APOMO95445 188 aa7.6□□□□□ -1.19
SCN9A-204ENST00000452182 Q8N814 137 aa7.6□□□□□ -1.19
SCN9A-204ENST00000452182 MRPL35Q9NZE8 188 aaKnown RBP7.6□□□□□ -1.19
SCN9A-204ENST00000452182 PKD1P98161 4303 aa7.6□□□□□ -1.19
SCN9A-204ENST00000452182 GVQW2A0A096LPI5 108 aaPredicted RBP7.6□□□□□ -1.19
SCN9A-204ENST00000452182 H0Y8G0 127 aa7.6□□□□□ -1.19
SCN9A-204ENST00000452182 LECT2O14960 151 aa7.6□□□□□ -1.19
SCN9A-204ENST00000452182 C3orf79P0CE67 100 aa7.6□□□□□ -1.19
SCN9A-204ENST00000452182 PET117Q6UWS5 81 aa7.6□□□□□ -1.19
SCN9A-204ENST00000452182 LINC00469Q8N7U9 141 aa7.6□□□□□ -1.19
SCN9A-204ENST00000452182 OR10D4PQ8NGN7 298 aa7.6□□□□□ -1.19
SCN9A-204ENST00000452182 IGHV3-64A0A075B6Q5 118 aa7.59□□□□□ -1.19
SCN9A-204ENST00000452182 A0A1B0GVY2 172 aa7.59□□□□□ -1.19
SCN9A-204ENST00000452182 C11orf86A6NJI1 115 aa7.59□□□□□ -1.19
SCN9A-204ENST00000452182 H3BRM9 83 aa7.59□□□□□ -1.19
SCN9A-204ENST00000452182 ZNF22P17026 224 aaPredicted RBP7.59□□□□□ -1.19
SCN9A-204ENST00000452182 DNAH11Q96DT5 4516 aa7.58□□□□□ -1.2
SCN9A-204ENST00000452182 PLNP26678 52 aa7.58□□□□□ -1.2
SCN9A-204ENST00000452182 LINC01545Q5VT33 79 aa7.58□□□□□ -1.2
SCN9A-204ENST00000452182 NTN5Q8WTR8 489 aaPredicted RBP7.58□□□□□ -1.2
SCN9A-204ENST00000452182 KRTDAPP60985 99 aa7.57□□□□□ -1.2
SCN9A-204ENST00000452182 hDV102S1A0JD36 115 aa7.56□□□□□ -1.2
SCN9A-204ENST00000452182 SMIM1B2RUZ4 78 aa7.56□□□□□ -1.2
SCN9A-204ENST00000452182 DPM2O94777 84 aa7.56□□□□□ -1.2
SCN9A-204ENST00000452182 ORAOV1Q8WV07 137 aa7.56□□□□□ -1.2
SCN9A-204ENST00000452182 HECTD4Q9Y4D8 3996 aa7.56□□□□□ -1.2
SCN9A-204ENST00000452182 IGKCP01834 107 aa7.56□□□□□ -1.2
SCN9A-204ENST00000452182 CNBPP62633 177 aaKnown RBP7.56□□□□□ -1.2
SCN9A-204ENST00000452182 HIGD2BQ4VC39 106 aa7.56□□□□□ -1.2
SCN9A-204ENST00000452182 TMEM170BQ5T4T1 132 aa7.56□□□□□ -1.2
SCN9A-204ENST00000452182 IGLV5-39A0A0G2JS06 123 aa7.55□□□□□ -1.2
SCN9A-204ENST00000452182 F8WDY8 70 aa7.55□□□□□ -1.2
SCN9A-204ENST00000452182 AKR1D1P51857 326 aa7.55□□□□□ -1.2
SCN9A-204ENST00000452182 SPAG11BQ08648 103 aa7.55□□□□□ -1.2
SCN9A-204ENST00000452182 KIAA0087Q14695 138 aa7.55□□□□□ -1.2
SCN9A-204ENST00000452182 Q8IZM0 81 aa7.55□□□□□ -1.2
SCN9A-204ENST00000452182 C2orf48Q96LS8 159 aa7.55□□□□□ -1.2
SCN9A-204ENST00000452182 PMCHL2Q9BQD1 86 aa7.55□□□□□ -1.2
SCN9A-204ENST00000452182 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.54□□□□□ -1.2
SCN9A-204ENST00000452182 TMEM223A0PJW6 202 aa7.54□□□□□ -1.2
SCN9A-204ENST00000452182 C20orf202A1L168 122 aa7.54□□□□□ -1.2
SCN9A-204ENST00000452182 KRTAP10-2P60368 255 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms