RNA–Protein interactions for RNA: ENST00000450385.5

SGCE-208, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-208ENST00000450385 IGKV2-24A0A0C4DH68 120 aa10.1□□□□□ -0.79
SGCE-208ENST00000450385 NPYP01303 97 aa10.1□□□□□ -0.79
SGCE-208ENST00000450385 Q6ZUT4 128 aa10.1□□□□□ -0.79
SGCE-208ENST00000450385 A0A096LNI7 61 aa10.09□□□□□ -0.79
SGCE-208ENST00000450385 NPSP0C0P6 89 aa10.09□□□□□ -0.79
SGCE-208ENST00000450385 G0S2P27469 103 aa10.09□□□□□ -0.79
SGCE-208ENST00000450385 IFI27P40305 119 aaPredicted RBP10.09□□□□□ -0.79
SGCE-208ENST00000450385 RPL39P62891 51 aaKnown RBP10.09□□□□□ -0.79
SGCE-208ENST00000450385 CLLU1Q5K131 121 aa10.09□□□□□ -0.79
SGCE-208ENST00000450385 IGHV3OR16-9A0A0B4J2B5 98 aa10.08□□□□□ -0.8
SGCE-208ENST00000450385 UQCC3Q6UW78 93 aa10.08□□□□□ -0.8
SGCE-208ENST00000450385 CAMK2N2Q96S95 79 aa10.08□□□□□ -0.8
SGCE-208ENST00000450385 MAP1LC3AQ9H492 121 aa10.08□□□□□ -0.8
SGCE-208ENST00000450385 PTTG1IPP53801 180 aa10.07□□□□□ -0.8
SGCE-208ENST00000450385 C5orf38Q86SI9 138 aa10.07□□□□□ -0.8
SGCE-208ENST00000450385 HNRNPA3P51991 378 aaKnown RBP10.06□□□□□ -0.8
SGCE-208ENST00000450385 RNASE13Q5GAN3 156 aaKnown RBP10.06□□□□□ -0.8
SGCE-208ENST00000450385 FAM104AQ969W3 186 aa10.06□□□□□ -0.8
SGCE-208ENST00000450385 LINC00526Q96FQ7 95 aa10.06□□□□□ -0.8
SGCE-208ENST00000450385 TRAV9-1A0A075B6T8 112 aa10.05□□□□□ -0.8
SGCE-208ENST00000450385 ORMDL2Q53FV1 153 aa10.05□□□□□ -0.8
SGCE-208ENST00000450385 LINC01561Q8N1V8 128 aa10.05□□□□□ -0.8
SGCE-208ENST00000450385 Q8N8P6 123 aa10.05□□□□□ -0.8
SGCE-208ENST00000450385 TMEM141Q96I45 108 aa10.05□□□□□ -0.8
SGCE-208ENST00000450385 CTDSP1Q9GZU7 261 aa10.05□□□□□ -0.8
SGCE-208ENST00000450385 MRPL35Q9NZE8 188 aaKnown RBP10.05□□□□□ -0.8
SGCE-208ENST00000450385 TGIF2-C20orf24A0A0A6YYL0 155 aa10.04□□□□□ -0.8
SGCE-208ENST00000450385 IFITM10A6NMD0 228 aa10.04□□□□□ -0.8
SGCE-208ENST00000450385 SPAG11BQ08648 103 aa10.04□□□□□ -0.8
SGCE-208ENST00000450385 NXT2Q9NPJ8 142 aaKnown RBP10.04□□□□□ -0.8
SGCE-208ENST00000450385 A0A087WZ39 114 aa10.03□□□□□ -0.8
SGCE-208ENST00000450385 PRR3P79522 188 aaKnown RBP10.03□□□□□ -0.8
SGCE-208ENST00000450385 PAPPA-AS1Q5QFB9 102 aa10.03□□□□□ -0.8
SGCE-208ENST00000450385 Q6ZRP5 223 aa10.03□□□□□ -0.8
SGCE-208ENST00000450385 CYSLTR1Q9Y271 337 aa10.03□□□□□ -0.8
SGCE-208ENST00000450385 IGLV4-3A0A075B6K6 122 aa10.02□□□□□ -0.81
SGCE-208ENST00000450385 NDUFA1O15239 70 aa10.02□□□□□ -0.81
SGCE-208ENST00000450385 TLX1NBP0CAT3 122 aa10.02□□□□□ -0.81
SGCE-208ENST00000450385 Q6ZN92 141 aa10.02□□□□□ -0.81
SGCE-208ENST00000450385 TEX43Q6ZNM6 134 aa10.02□□□□□ -0.81
SGCE-208ENST00000450385 ORAOV1Q8WV07 137 aa10.02□□□□□ -0.81
SGCE-208ENST00000450385 C2orf88Q9BSF0 95 aa10.02□□□□□ -0.81
SGCE-208ENST00000450385 LINC01549A6NIU2 74 aa10.01□□□□□ -0.81
SGCE-208ENST00000450385 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.01□□□□□ -0.81
SGCE-208ENST00000450385 GAGE2BQ13066 116 aa10.01□□□□□ -0.81
SGCE-208ENST00000450385 SPINK6Q6UWN8 80 aa10.01□□□□□ -0.81
SGCE-208ENST00000450385 LOC389332A0A1B0GUA5 103 aa10□□□□□ -0.81
SGCE-208ENST00000450385 TMEM218A2RU14 115 aa10□□□□□ -0.81
SGCE-208ENST00000450385 OPRPNQ99935 248 aaPredicted RBP10□□□□□ -0.81
SGCE-208ENST00000450385 VCX2Q9H322 139 aa10□□□□□ -0.81
SGCE-208ENST00000450385 SEC11AP67812 179 aa9.99□□□□□ -0.81
SGCE-208ENST00000450385 LINC00242Q5T6M2 205 aa9.99□□□□□ -0.81
SGCE-208ENST00000450385 C2orf66Q6UXQ4 117 aa9.99□□□□□ -0.81
SGCE-208ENST00000450385 FAM19A3Q7Z5A8 133 aa9.99□□□□□ -0.81
SGCE-208ENST00000450385 AMELXQ99217 191 aa9.99□□□□□ -0.81
SGCE-208ENST00000450385 SEC11CQ9BY50 192 aa9.99□□□□□ -0.81
SGCE-208ENST00000450385 MT1HL1P0DM35 61 aa9.98□□□□□ -0.81
SGCE-208ENST00000450385 UBE2D1P51668 147 aa9.98□□□□□ -0.81
SGCE-208ENST00000450385 COX19Q49B96 90 aa9.98□□□□□ -0.81
SGCE-208ENST00000450385 REG3GQ6UW15 175 aa9.98□□□□□ -0.81
SGCE-208ENST00000450385 LINC01600Q96MT4 127 aa9.98□□□□□ -0.81
SGCE-208ENST00000450385 TRBV30A0A0K0K1B3 111 aa9.97□□□□□ -0.81
SGCE-208ENST00000450385 RPL18AQ02543 176 aaKnown RBP9.97□□□□□ -0.81
SGCE-208ENST00000450385 IGIPA6NJ69 53 aa9.96□□□□□ -0.82
SGCE-208ENST00000450385 S100PP25815 95 aa9.96□□□□□ -0.82
SGCE-208ENST00000450385 SRSF9Q13242 221 aaKnown RBP eCLIP9.96□□□□□ -0.82
SGCE-208ENST00000450385 C9orf116Q5BN46 136 aaPredicted RBP9.96□□□□□ -0.82
SGCE-208ENST00000450385 TIMM17AQ99595 171 aa9.96□□□□□ -0.82
SGCE-208ENST00000450385 GNB1LQ9BYB4 327 aa9.96□□□□□ -0.82
SGCE-208ENST00000450385 A0A1W2PNN7 141 aa9.95□□□□□ -0.82
SGCE-208ENST00000450385 KIAA0087Q14695 138 aa9.95□□□□□ -0.82
SGCE-208ENST00000450385 ODF1Q14990 250 aa9.94□□□□□ -0.82
SGCE-208ENST00000450385 PLA2G2DQ9UNK4 145 aa9.94□□□□□ -0.82
SGCE-208ENST00000450385 ADCYAP1P18509 176 aa9.93□□□□□ -0.82
SGCE-208ENST00000450385 HERVK_113P63121 156 aa9.93□□□□□ -0.82
SGCE-208ENST00000450385 UNQ6190/PRO20217Q6UXQ8 127 aa9.93□□□□□ -0.82
SGCE-208ENST00000450385 ERASQ7Z444 233 aa9.93□□□□□ -0.82
SGCE-208ENST00000450385 TOMM6Q96B49 74 aa9.93□□□□□ -0.82
SGCE-208ENST00000450385 PACRGQ96M98 296 aaPredicted RBP9.93□□□□□ -0.82
SGCE-208ENST00000450385 TNXBP22105 4242 aa9.93□□□□□ -0.82
SGCE-208ENST00000450385 IFITM2Q01629 132 aa9.92□□□□□ -0.82
SGCE-208ENST00000450385 A0A0J9YXV3 536 aa9.91□□□□□ -0.82
SGCE-208ENST00000450385 LINC01546A6NGU7 62 aa9.91□□□□□ -0.82
SGCE-208ENST00000450385 NDUFC2-KCTD14E9PQ53 114 aa9.91□□□□□ -0.82
SGCE-208ENST00000450385 MT-ND6P03923 174 aa9.91□□□□□ -0.82
SGCE-208ENST00000450385 PRSS2P07478 247 aa9.91□□□□□ -0.82
SGCE-208ENST00000450385 C10orf25Q5T742 122 aa9.91□□□□□ -0.82
SGCE-208ENST00000450385 LINC00173Q6ZV60 143 aa9.91□□□□□ -0.82
SGCE-208ENST00000450385 Q8IZM0 81 aa9.91□□□□□ -0.82
SGCE-208ENST00000450385 C6orf48Q9UBA6 75 aa9.91□□□□□ -0.82
SGCE-208ENST00000450385 RHEBQ15382 184 aa9.9□□□□□ -0.82
SGCE-208ENST00000450385 C10orf91Q5T1B1 145 aa9.9□□□□□ -0.82
SGCE-208ENST00000450385 PSORS1C2Q9UIG4 136 aa9.9□□□□□ -0.82
SGCE-208ENST00000450385 CKS1BP61024 79 aa9.89□□□□□ -0.83
SGCE-208ENST00000450385 C6orf226Q5I0X4 101 aa9.89□□□□□ -0.83
SGCE-208ENST00000450385 GEMIN7Q9H840 131 aaKnown RBP9.89□□□□□ -0.83
SGCE-208ENST00000450385 HMCN2Q8NDA2 5059 aa9.88□□□□□ -0.83
SGCE-208ENST00000450385 SMCPP49901 116 aaPredicted RBP9.88□□□□□ -0.83
SGCE-208ENST00000450385 CXCL5P42830 114 aa9.87□□□□□ -0.83
SGCE-208ENST00000450385 KRTAP10-8P60410 259 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 151.2 ms