RNA–Protein interactions for RNA: ENST00000450169.6

LSM5-208, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM5, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-208ENST00000450169 RBM3P98179 157 aaKnown RBP6.16□□□□□ -1.42
LSM5-208ENST00000450169 SS18Q15532 418 aa6.16□□□□□ -1.42
LSM5-208ENST00000450169 SND1-IT1Q9HBX3 110 aa6.16□□□□□ -1.42
LSM5-208ENST00000450169 ORMDL1Q9P0S3 153 aa6.16□□□□□ -1.42
LSM5-208ENST00000450169 NBASA2RRP1 2371 aa6.16□□□□□ -1.42
LSM5-208ENST00000450169 IGHV3OR16-12A0A075B7B8 117 aa6.16□□□□□ -1.42
LSM5-208ENST00000450169 F8WEM9 126 aa6.16□□□□□ -1.42
LSM5-208ENST00000450169 IGKV3-20P01619 116 aa6.16□□□□□ -1.42
LSM5-208ENST00000450169 SLPIP03973 132 aa6.16□□□□□ -1.42
LSM5-208ENST00000450169 Q8NA96 180 aa6.16□□□□□ -1.42
LSM5-208ENST00000450169 Q9UF83 564 aa6.16□□□□□ -1.42
LSM5-208ENST00000450169 SNURFQ9Y675 71 aa6.16□□□□□ -1.42
LSM5-208ENST00000450169 CACNA1BQ00975 2339 aa6.16□□□□□ -1.42
LSM5-208ENST00000450169 UBL5Q9BZL1 73 aa6.15□□□□□ -1.42
LSM5-208ENST00000450169 RPL36AP83881 106 aaKnown RBP6.15□□□□□ -1.43
LSM5-208ENST00000450169 RPL36ALQ969Q0 106 aaKnown RBP6.15□□□□□ -1.43
LSM5-208ENST00000450169 RMI2Q96E14 147 aa6.15□□□□□ -1.43
LSM5-208ENST00000450169 MED13LQ71F56 2210 aa6.15□□□□□ -1.43
LSM5-208ENST00000450169 IGHV3-38A0A0C4DH36 116 aa6.14□□□□□ -1.43
LSM5-208ENST00000450169 JMJD7-PLA2G4BH0Y9G9 81 aa6.14□□□□□ -1.43
LSM5-208ENST00000450169 LY6HO94772 140 aa6.14□□□□□ -1.43
LSM5-208ENST00000450169 BLCAPP62952 87 aa6.14□□□□□ -1.43
LSM5-208ENST00000450169 SPINK13Q1W4C9 94 aa6.14□□□□□ -1.43
LSM5-208ENST00000450169 C5orf56Q8N8D9 126 aa6.14□□□□□ -1.43
LSM5-208ENST00000450169 ATP5EP56381 51 aaPredicted RBP6.13□□□□□ -1.43
LSM5-208ENST00000450169 ITPR1Q14643 2758 aa6.13□□□□□ -1.43
LSM5-208ENST00000450169 NDUFC1O43677 76 aa6.13□□□□□ -1.43
LSM5-208ENST00000450169 IGHV3-11P01762 117 aa6.13□□□□□ -1.43
LSM5-208ENST00000450169 Q6ZSN1 163 aa6.13□□□□□ -1.43
LSM5-208ENST00000450169 FAM19A3Q7Z5A8 133 aa6.13□□□□□ -1.43
LSM5-208ENST00000450169 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.12□□□□□ -1.43
LSM5-208ENST00000450169 C11orf72Q8NBR9 251 aa6.12□□□□□ -1.43
LSM5-208ENST00000450169 SAA4P35542 130 aa6.11□□□□□ -1.43
LSM5-208ENST00000450169 CFHR3Q02985 330 aa6.11□□□□□ -1.43
LSM5-208ENST00000450169 LRBAP50851 2863 aa6.11□□□□□ -1.43
LSM5-208ENST00000450169 DCHS2Q6V1P9 2916 aa6.11□□□□□ -1.43
LSM5-208ENST00000450169 CCL21O00585 134 aa6.11□□□□□ -1.43
LSM5-208ENST00000450169 HTN1P15515 57 aa6.11□□□□□ -1.43
LSM5-208ENST00000450169 BPESC1Q9GZL8 116 aa6.11□□□□□ -1.43
LSM5-208ENST00000450169 TRAV10A0A0B4J240 114 aa6.1□□□□□ -1.43
LSM5-208ENST00000450169 SIRPDQ9H106 197 aa6.1□□□□□ -1.43
LSM5-208ENST00000450169 SVEP1Q4LDE5 3571 aa6.1□□□□□ -1.43
LSM5-208ENST00000450169 CCL18P55774 89 aa6.1□□□□□ -1.43
LSM5-208ENST00000450169 SNRPD3P62318 126 aaKnown RBP6.1□□□□□ -1.43
LSM5-208ENST00000450169 MPLKIPQ8TAP9 179 aa6.1□□□□□ -1.43
LSM5-208ENST00000450169 PIEZO1Q92508 2521 aa6.09□□□□□ -1.43
LSM5-208ENST00000450169 ZFP36P26651 326 aaKnown RBP6.09□□□□□ -1.43
LSM5-208ENST00000450169 LINC00158P58513 81 aa6.09□□□□□ -1.43
LSM5-208ENST00000450169 USMG5Q96IX5 58 aa6.09□□□□□ -1.43
LSM5-208ENST00000450169 COL6A6A6NMZ7 2263 aa6.09□□□□□ -1.43
LSM5-208ENST00000450169 TMEM256-PLSCR3K7ERE1 68 aa6.09□□□□□ -1.44
LSM5-208ENST00000450169 LINC00167Q96N53 147 aa6.09□□□□□ -1.44
LSM5-208ENST00000450169 IGHV3-53P01767 116 aa6.08□□□□□ -1.44
LSM5-208ENST00000450169 LINC01547P58512 204 aaPredicted RBP6.08□□□□□ -1.44
LSM5-208ENST00000450169 FAM229BQ4G0N7 80 aa6.08□□□□□ -1.44
LSM5-208ENST00000450169 Q6ZTI0 123 aa6.08□□□□□ -1.44
LSM5-208ENST00000450169 Q96MF0 132 aa6.08□□□□□ -1.44
LSM5-208ENST00000450169 MOB4Q9Y3A3 225 aa6.08□□□□□ -1.44
LSM5-208ENST00000450169 ANKHD1Q8IWZ3 2542 aaKnown RBP6.08□□□□□ -1.44
LSM5-208ENST00000450169 PAX4O43316 350 aa6.08□□□□□ -1.44
LSM5-208ENST00000450169 MIFP14174 115 aa6.08□□□□□ -1.44
LSM5-208ENST00000450169 IL17DQ8TAD2 202 aa6.08□□□□□ -1.44
LSM5-208ENST00000450169 COX7B2Q8TF08 81 aa6.08□□□□□ -1.44
LSM5-208ENST00000450169 HRNRQ86YZ3 2850 aaPredicted RBP6.07□□□□□ -1.44
LSM5-208ENST00000450169 TRBV7-4A0A0J9YYF1 115 aa6.07□□□□□ -1.44
LSM5-208ENST00000450169 LY6G6DO95868 133 aa6.07□□□□□ -1.44
LSM5-208ENST00000450169 Q8N814 137 aa6.07□□□□□ -1.44
LSM5-208ENST00000450169 K7EMT4 169 aa6.06□□□□□ -1.44
LSM5-208ENST00000450169 HAMPP81172 84 aa6.06□□□□□ -1.44
LSM5-208ENST00000450169 TOMM7Q9P0U1 55 aa6.06□□□□□ -1.44
LSM5-208ENST00000450169 TRBV6-4A0A1B0GX49 114 aa6.06□□□□□ -1.44
LSM5-208ENST00000450169 H3BUA1 57 aa6.06□□□□□ -1.44
LSM5-208ENST00000450169 PMAIP1Q13794 54 aa6.06□□□□□ -1.44
LSM5-208ENST00000450169 TM2D3Q9BRN9 247 aa6.06□□□□□ -1.44
LSM5-208ENST00000450169 DOPEY2Q9Y3R5 2298 aa6.06□□□□□ -1.44
LSM5-208ENST00000450169 IBA57-AS1B1ANH7 110 aa6.05□□□□□ -1.44
LSM5-208ENST00000450169 CDC42SE2Q9NRR3 84 aa6.05□□□□□ -1.44
LSM5-208ENST00000450169 COL12A1Q99715 3063 aa6.05□□□□□ -1.44
LSM5-208ENST00000450169 SPTBN1Q01082 2364 aaKnown RBP6.05□□□□□ -1.44
LSM5-208ENST00000450169 ASH1LQ9NR48 2969 aaKnown RBP6.05□□□□□ -1.44
LSM5-208ENST00000450169 CACNA1AO00555 2505 aa6.05□□□□□ -1.44
LSM5-208ENST00000450169 K7EQG2 157 aa6.05□□□□□ -1.44
LSM5-208ENST00000450169 PRM2P04554 102 aa6.05□□□□□ -1.44
LSM5-208ENST00000450169 Q6ZQT0 140 aa6.05□□□□□ -1.44
LSM5-208ENST00000450169 Q8N3U1 123 aa6.05□□□□□ -1.44
LSM5-208ENST00000450169 VPS13CQ709C8 3753 aa6.04□□□□□ -1.44
LSM5-208ENST00000450169 PKD1L2Q7Z442 2459 aa6.04□□□□□ -1.44
LSM5-208ENST00000450169 C6orf226Q5I0X4 101 aa6.04□□□□□ -1.44
LSM5-208ENST00000450169 Q6ZVQ6 151 aa6.04□□□□□ -1.44
LSM5-208ENST00000450169 PRR15Q8IV56 129 aa6.04□□□□□ -1.44
LSM5-208ENST00000450169 LINC01560Q8TB33 94 aa6.04□□□□□ -1.44
LSM5-208ENST00000450169 HIVEP3Q5T1R4 2406 aa6.04□□□□□ -1.44
LSM5-208ENST00000450169 PLAC8L1A1L4L8 177 aa6.04□□□□□ -1.44
LSM5-208ENST00000450169 CXCL6P80162 114 aa6.04□□□□□ -1.44
LSM5-208ENST00000450169 ESRGQ1W209 222 aa6.04□□□□□ -1.44
LSM5-208ENST00000450169 TMEM254Q8TBM7 123 aa6.04□□□□□ -1.44
LSM5-208ENST00000450169 K7EQD1 137 aa6.03□□□□□ -1.44
LSM5-208ENST00000450169 CFAP46Q8IYW2 2715 aa6.03□□□□□ -1.44
LSM5-208ENST00000450169 LOC110117498A0A087WWA1 95 aa6.02□□□□□ -1.44
LSM5-208ENST00000450169 NREPQ16612 68 aa6.02□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms