RNA–Protein interactions for RNA: ENST00000449879.5

RAB11FIP3-204, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 3

Gene RAB11FIP3, Length 580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-204ENST00000449879 HMCN2Q8NDA2 5059 aa10.47□□□□□ -0.73
RAB11FIP3-204ENST00000449879 IGKV2-24A0A0C4DH68 120 aa10.47□□□□□ -0.73
RAB11FIP3-204ENST00000449879 K7EMI3 77 aa10.47□□□□□ -0.73
RAB11FIP3-204ENST00000449879 CCL25O15444 150 aa10.47□□□□□ -0.73
RAB11FIP3-204ENST00000449879 XCL1P47992 114 aa10.47□□□□□ -0.73
RAB11FIP3-204ENST00000449879 C7orf33Q8WU49 177 aa10.47□□□□□ -0.73
RAB11FIP3-204ENST00000449879 ORMDL2Q53FV1 153 aa10.46□□□□□ -0.73
RAB11FIP3-204ENST00000449879 RNASE13Q5GAN3 156 aaKnown RBP10.46□□□□□ -0.73
RAB11FIP3-204ENST00000449879 MRPL18Q9H0U6 180 aaKnown RBP10.46□□□□□ -0.73
RAB11FIP3-204ENST00000449879 GVQW2A0A096LPI5 108 aaPredicted RBP10.45□□□□□ -0.74
RAB11FIP3-204ENST00000449879 C1orf196B1AJZ1 125 aa10.45□□□□□ -0.74
RAB11FIP3-204ENST00000449879 IFI27P40305 119 aaPredicted RBP10.45□□□□□ -0.74
RAB11FIP3-204ENST00000449879 MRPS36P82909 103 aaKnown RBP10.45□□□□□ -0.74
RAB11FIP3-204ENST00000449879 FOXI1Q12951 378 aa10.45□□□□□ -0.74
RAB11FIP3-204ENST00000449879 TGIF2-C20orf24A0A0A6YYL0 155 aa10.44□□□□□ -0.74
RAB11FIP3-204ENST00000449879 CD164L2Q6UWJ8 174 aa10.44□□□□□ -0.74
RAB11FIP3-204ENST00000449879 STPG4Q8N801 248 aa10.44□□□□□ -0.74
RAB11FIP3-204ENST00000449879 CYSLTR1Q9Y271 337 aa10.44□□□□□ -0.74
RAB11FIP3-204ENST00000449879 TRAV13-1A0A0B4J241 112 aa10.43□□□□□ -0.74
RAB11FIP3-204ENST00000449879 FABP9Q0Z7S8 132 aa10.43□□□□□ -0.74
RAB11FIP3-204ENST00000449879 ALKBH7Q9BT30 221 aaPredicted RBP10.43□□□□□ -0.74
RAB11FIP3-204ENST00000449879 PYGO1Q9Y3Y4 419 aa10.43□□□□□ -0.74
RAB11FIP3-204ENST00000449879 C2orf66Q6UXQ4 117 aa10.42□□□□□ -0.74
RAB11FIP3-204ENST00000449879 SLC7A5P1Q8MH63 180 aa10.42□□□□□ -0.74
RAB11FIP3-204ENST00000449879 FAM104AQ969W3 186 aa10.42□□□□□ -0.74
RAB11FIP3-204ENST00000449879 LINC00526Q96FQ7 95 aa10.42□□□□□ -0.74
RAB11FIP3-204ENST00000449879 A0A096LNI7 61 aa10.41□□□□□ -0.74
RAB11FIP3-204ENST00000449879 G0S2P27469 103 aa10.41□□□□□ -0.74
RAB11FIP3-204ENST00000449879 OPRPNQ99935 248 aaPredicted RBP10.41□□□□□ -0.74
RAB11FIP3-204ENST00000449879 TRAPPC1Q9Y5R8 145 aa10.41□□□□□ -0.74
RAB11FIP3-204ENST00000449879 IGLV4-3A0A075B6K6 122 aa10.4□□□□□ -0.74
RAB11FIP3-204ENST00000449879 IGHV1-58A0A0C4DH39 117 aa10.4□□□□□ -0.74
RAB11FIP3-204ENST00000449879 IFITM10A6NMD0 228 aa10.4□□□□□ -0.74
RAB11FIP3-204ENST00000449879 TMEM141Q96I45 108 aa10.4□□□□□ -0.74
RAB11FIP3-204ENST00000449879 UBR4Q5T4S7 5183 aa10.39□□□□□ -0.75
RAB11FIP3-204ENST00000449879 COX7A2LO14548 114 aa10.38□□□□□ -0.75
RAB11FIP3-204ENST00000449879 NPSP0C0P6 89 aa10.38□□□□□ -0.75
RAB11FIP3-204ENST00000449879 MALP21145 153 aa10.38□□□□□ -0.75
RAB11FIP3-204ENST00000449879 PRR3P79522 188 aaKnown RBP10.38□□□□□ -0.75
RAB11FIP3-204ENST00000449879 Q6ZN92 141 aa10.38□□□□□ -0.75
RAB11FIP3-204ENST00000449879 CARD19Q96LW7 228 aa10.38□□□□□ -0.75
RAB11FIP3-204ENST00000449879 ZNF561-AS1K7EIQ3 104 aa10.37□□□□□ -0.75
RAB11FIP3-204ENST00000449879 TEX43Q6ZNM6 134 aa10.37□□□□□ -0.75
RAB11FIP3-204ENST00000449879 YPEL4Q96NS1 127 aa10.37□□□□□ -0.75
RAB11FIP3-204ENST00000449879 SMCO4Q9NRQ5 59 aa10.37□□□□□ -0.75
RAB11FIP3-204ENST00000449879 LINC00474Q9P2X8 69 aa10.37□□□□□ -0.75
RAB11FIP3-204ENST00000449879 LINC01546A6NGU7 62 aa10.36□□□□□ -0.75
RAB11FIP3-204ENST00000449879 SYCNQ0VAF6 134 aa10.36□□□□□ -0.75
RAB11FIP3-204ENST00000449879 FA2HQ7L5A8 372 aa10.36□□□□□ -0.75
RAB11FIP3-204ENST00000449879 CBLN2Q8IUK8 224 aa10.36□□□□□ -0.75
RAB11FIP3-204ENST00000449879 TOMM6Q96B49 74 aa10.36□□□□□ -0.75
RAB11FIP3-204ENST00000449879 C2orf88Q9BSF0 95 aa10.36□□□□□ -0.75
RAB11FIP3-204ENST00000449879 PKIGQ9Y2B9 76 aa10.36□□□□□ -0.75
RAB11FIP3-204ENST00000449879 LINC01549A6NIU2 74 aa10.35□□□□□ -0.75
RAB11FIP3-204ENST00000449879 IGIPA6NJ69 53 aa10.35□□□□□ -0.75
RAB11FIP3-204ENST00000449879 PAPPA-AS1Q5QFB9 102 aa10.35□□□□□ -0.75
RAB11FIP3-204ENST00000449879 TIMM17AQ99595 171 aa10.35□□□□□ -0.75
RAB11FIP3-204ENST00000449879 APOMO95445 188 aa10.34□□□□□ -0.75
RAB11FIP3-204ENST00000449879 C5orf38Q86SI9 138 aa10.34□□□□□ -0.75
RAB11FIP3-204ENST00000449879 LINC01600Q96MT4 127 aa10.34□□□□□ -0.75
RAB11FIP3-204ENST00000449879 VCX2Q9H322 139 aa10.34□□□□□ -0.75
RAB11FIP3-204ENST00000449879 IGHV3OR16-9A0A0B4J2B5 98 aa10.33□□□□□ -0.76
RAB11FIP3-204ENST00000449879 LINC00173Q6ZV60 143 aa10.33□□□□□ -0.76
RAB11FIP3-204ENST00000449879 C18orf32Q8TCD1 76 aa10.33□□□□□ -0.76
RAB11FIP3-204ENST00000449879 AMELXQ99217 191 aa10.33□□□□□ -0.76
RAB11FIP3-204ENST00000449879 IGLV4-69A0A075B6H9 119 aa10.32□□□□□ -0.76
RAB11FIP3-204ENST00000449879 UBE2D1P51668 147 aa10.32□□□□□ -0.76
RAB11FIP3-204ENST00000449879 GAGE2BQ13066 116 aa10.32□□□□□ -0.76
RAB11FIP3-204ENST00000449879 ERASQ7Z444 233 aa10.32□□□□□ -0.76
RAB11FIP3-204ENST00000449879 SCGB3A1Q96QR1 104 aa10.32□□□□□ -0.76
RAB11FIP3-204ENST00000449879 ODF1Q14990 250 aa10.31□□□□□ -0.76
RAB11FIP3-204ENST00000449879 LINC00242Q5T6M2 205 aa10.31□□□□□ -0.76
RAB11FIP3-204ENST00000449879 ZC2HC1BQ5TFG8 222 aa10.31□□□□□ -0.76
RAB11FIP3-204ENST00000449879 PTTG1IPP53801 180 aa10.3□□□□□ -0.76
RAB11FIP3-204ENST00000449879 SPINK6Q6UWN8 80 aa10.3□□□□□ -0.76
RAB11FIP3-204ENST00000449879 Q6ZRP5 223 aa10.3□□□□□ -0.76
RAB11FIP3-204ENST00000449879 OR10D4PQ8NGN7 298 aa10.3□□□□□ -0.76
RAB11FIP3-204ENST00000449879 LOC107984640A0A0U1RRK4 108 aa10.29□□□□□ -0.76
RAB11FIP3-204ENST00000449879 LINC00614P0C842 121 aa10.29□□□□□ -0.76
RAB11FIP3-204ENST00000449879 RAB5BP61020 215 aa10.29□□□□□ -0.76
RAB11FIP3-204ENST00000449879 SPAG11BQ08648 103 aa10.29□□□□□ -0.76
RAB11FIP3-204ENST00000449879 CAMK2N2Q96S95 79 aa10.29□□□□□ -0.76
RAB11FIP3-204ENST00000449879 A0A087WZ39 114 aa10.28□□□□□ -0.76
RAB11FIP3-204ENST00000449879 A0A0J9YXV3 536 aa10.28□□□□□ -0.76
RAB11FIP3-204ENST00000449879 SRSF9Q13242 221 aaKnown RBP eCLIP10.28□□□□□ -0.763e-6■□□□□ 8.3
RAB11FIP3-204ENST00000449879 REG3GQ6UW15 175 aa10.28□□□□□ -0.76
RAB11FIP3-204ENST00000449879 FAM19A3Q7Z5A8 133 aa10.28□□□□□ -0.76
RAB11FIP3-204ENST00000449879 ORAOV1Q8WV07 137 aa10.28□□□□□ -0.76
RAB11FIP3-204ENST00000449879 C2orf48Q96LS8 159 aa10.28□□□□□ -0.76
RAB11FIP3-204ENST00000449879 TNXBP22105 4242 aa10.27□□□□□ -0.76
RAB11FIP3-204ENST00000449879 SEC11AP67812 179 aa10.27□□□□□ -0.77
RAB11FIP3-204ENST00000449879 URB1-AS1Q96HZ7 61 aa10.27□□□□□ -0.77
RAB11FIP3-204ENST00000449879 A0A1W2PNN7 141 aa10.26□□□□□ -0.77
RAB11FIP3-204ENST00000449879 KRTAP10-8P60410 259 aa10.26□□□□□ -0.77
RAB11FIP3-204ENST00000449879 A0A096LNJ9 63 aa10.25□□□□□ -0.77
RAB11FIP3-204ENST00000449879 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.25□□□□□ -0.77
RAB11FIP3-204ENST00000449879 HBDP02042 147 aa10.25□□□□□ -0.77
RAB11FIP3-204ENST00000449879 HERVK_113P63121 156 aa10.25□□□□□ -0.77
RAB11FIP3-204ENST00000449879 LINC01561Q8N1V8 128 aa10.25□□□□□ -0.77
RAB11FIP3-204ENST00000449879 F8WDY8 70 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms