RNA–Protein interactions for RNA: ENST00000449575.6

CCDC171-203, Transcript of coiled-coil domain containing 171, humanhuman

TSL 2

Gene CCDC171, Length 2,628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-203ENST00000449575 C16orf74Q96GX8 76 aa6.98□□□□□ -1.29
CCDC171-203ENST00000449575 SPANXCQ9NY87 97 aa6.98□□□□□ -1.29
CCDC171-203ENST00000449575 PPP1R17O96001 155 aa6.98□□□□□ -1.29
CCDC171-203ENST00000449575 SUMO2P61956 95 aaKnown RBP6.98□□□□□ -1.29
CCDC171-203ENST00000449575 Q6ZTC4 211 aa6.98□□□□□ -1.29
CCDC171-203ENST00000449575 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.97□□□□□ -1.29
CCDC171-203ENST00000449575 A0A0B4J2C4 111 aa6.97□□□□□ -1.29
CCDC171-203ENST00000449575 TRBV10-2A0A0K0K1G8 114 aa6.97□□□□□ -1.29
CCDC171-203ENST00000449575 FAM240AA0A1B0GVK7 77 aa6.97□□□□□ -1.29
CCDC171-203ENST00000449575 LINC01620Q4KN68 170 aa6.97□□□□□ -1.29
CCDC171-203ENST00000449575 C2orf66Q6UXQ4 117 aa6.97□□□□□ -1.29
CCDC171-203ENST00000449575 UBE2WQ96B02 151 aa6.97□□□□□ -1.29
CCDC171-203ENST00000449575 LINC00467Q9BRT7 94 aa6.97□□□□□ -1.29
CCDC171-203ENST00000449575 F5H768 121 aa6.97□□□□□ -1.29
CCDC171-203ENST00000449575 Q6ZTI0 123 aa6.97□□□□□ -1.29
CCDC171-203ENST00000449575 PPDPFQ9H3Y8 114 aa6.97□□□□□ -1.29
CCDC171-203ENST00000449575 TRAV26-2A0A0B4J265 109 aa6.97□□□□□ -1.29
CCDC171-203ENST00000449575 IGHV3-16A0A0C4DH30 117 aa6.97□□□□□ -1.29
CCDC171-203ENST00000449575 IGHV3-33P01772 117 aa6.97□□□□□ -1.29
CCDC171-203ENST00000449575 DEFB130BP0DP73 79 aa6.97□□□□□ -1.29
CCDC171-203ENST00000449575 DEFB130AP0DP74 79 aa6.97□□□□□ -1.29
CCDC171-203ENST00000449575 MUC7Q8TAX7 377 aa6.97□□□□□ -1.29
CCDC171-203ENST00000449575 M0R381 172 aa6.96□□□□□ -1.3
CCDC171-203ENST00000449575 DNAJC30Q96LL9 226 aa6.96□□□□□ -1.3
CCDC171-203ENST00000449575 TRBV7-7A0A0K0K1E9 115 aa6.96□□□□□ -1.3
CCDC171-203ENST00000449575 SPART-AS1P0CW21 52 aa6.96□□□□□ -1.3
CCDC171-203ENST00000449575 RNASE3P12724 160 aaKnown RBP6.96□□□□□ -1.3
CCDC171-203ENST00000449575 IMUPQ9GZP8 106 aa6.96□□□□□ -1.3
CCDC171-203ENST00000449575 C11orf86A6NJI1 115 aa6.95□□□□□ -1.3
CCDC171-203ENST00000449575 H3BT86 120 aa6.95□□□□□ -1.3
CCDC171-203ENST00000449575 LGALS3P17931 250 aaKnown RBP6.95□□□□□ -1.3
CCDC171-203ENST00000449575 TMEM101Q96IK0 257 aa6.95□□□□□ -1.3
CCDC171-203ENST00000449575 TRGV1A0A0A0MS02 117 aa6.94□□□□□ -1.3
CCDC171-203ENST00000449575 TRBV30A0A0K0K1B3 111 aa6.94□□□□□ -1.3
CCDC171-203ENST00000449575 DAZ2Q13117 558 aaKnown RBP6.94□□□□□ -1.3
CCDC171-203ENST00000449575 PMVKQ15126 192 aa6.94□□□□□ -1.3
CCDC171-203ENST00000449575 Q1RN00 199 aa6.94□□□□□ -1.3
CCDC171-203ENST00000449575 TMEM141Q96I45 108 aa6.94□□□□□ -1.3
CCDC171-203ENST00000449575 TRGV11A0A075B6L2 103 aa6.94□□□□□ -1.3
CCDC171-203ENST00000449575 LYRM9A8MSI8 78 aa6.94□□□□□ -1.3
CCDC171-203ENST00000449575 HTN3P15516 51 aa6.94□□□□□ -1.3
CCDC171-203ENST00000449575 DAD1P61803 113 aa6.94□□□□□ -1.3
CCDC171-203ENST00000449575 ZNF415Q09FC8 603 aa6.94□□□□□ -1.3
CCDC171-203ENST00000449575 TMEM170BQ5T4T1 132 aa6.94□□□□□ -1.3
CCDC171-203ENST00000449575 LINC00612Q8N6U2 182 aa6.94□□□□□ -1.3
CCDC171-203ENST00000449575 DPH3P1Q9H4G8 78 aa6.94□□□□□ -1.3
CCDC171-203ENST00000449575 TEX49A0A1B0GTD5 131 aa6.93□□□□□ -1.3
CCDC171-203ENST00000449575 M0R2P5 195 aa6.93□□□□□ -1.3
CCDC171-203ENST00000449575 CASC10Q5T4H9 136 aa6.93□□□□□ -1.3
CCDC171-203ENST00000449575 C2orf82Q6UX34 121 aa6.93□□□□□ -1.3
CCDC171-203ENST00000449575 IGLV4-69A0A075B6H9 119 aa6.93□□□□□ -1.3
CCDC171-203ENST00000449575 J3QQQ9 107 aa6.93□□□□□ -1.3
CCDC171-203ENST00000449575 ATP5G1P05496 136 aa6.93□□□□□ -1.3
CCDC171-203ENST00000449575 ACYP1P07311 99 aa6.93□□□□□ -1.3
CCDC171-203ENST00000449575 C9orf85Q96MD7 179 aa6.93□□□□□ -1.3
CCDC171-203ENST00000449575 KMT2CQ8NEZ4 4911 aaKnown RBP6.93□□□□□ -1.3
CCDC171-203ENST00000449575 COX6CP09669 75 aa6.92□□□□□ -1.3
CCDC171-203ENST00000449575 ZNF56Q15929 161 aa6.92□□□□□ -1.3
CCDC171-203ENST00000449575 DGAT2L7PQ6IED9 249 aa6.92□□□□□ -1.3
CCDC171-203ENST00000449575 POM121L12Q8N7R1 296 aa6.92□□□□□ -1.3
CCDC171-203ENST00000449575 IGHV3-53P01767 116 aa6.92□□□□□ -1.3
CCDC171-203ENST00000449575 CRYGDP07320 174 aa6.92□□□□□ -1.3
CCDC171-203ENST00000449575 CHCHD5Q9BSY4 110 aa6.92□□□□□ -1.3
CCDC171-203ENST00000449575 DEFB131BA0A096LNP1 70 aa6.91□□□□□ -1.3
CCDC171-203ENST00000449575 S100A4P26447 101 aaKnown RBP6.91□□□□□ -1.3
CCDC171-203ENST00000449575 TIMM17AQ99595 171 aa6.91□□□□□ -1.3
CCDC171-203ENST00000449575 JPT2Q9H910 190 aa6.91□□□□□ -1.3
CCDC171-203ENST00000449575 LEPROTO15243 131 aa6.91□□□□□ -1.3
CCDC171-203ENST00000449575 TRGV2A0A075B6R0 118 aa6.9□□□□□ -1.3
CCDC171-203ENST00000449575 A0A1B0GX51 115 aa6.9□□□□□ -1.3
CCDC171-203ENST00000449575 H7C2G1 150 aa6.9□□□□□ -1.3
CCDC171-203ENST00000449575 J3KT08 172 aa6.9□□□□□ -1.3
CCDC171-203ENST00000449575 UQCRQO14949 82 aa6.9□□□□□ -1.3
CCDC171-203ENST00000449575 MED14OSP0DP75 135 aa6.9□□□□□ -1.3
CCDC171-203ENST00000449575 ZNF876PQ49A33 203 aa6.9□□□□□ -1.3
CCDC171-203ENST00000449575 C9orf153Q5TBE3 101 aa6.9□□□□□ -1.3
CCDC171-203ENST00000449575 CEMP1Q6PRD7 247 aaPredicted RBP6.9□□□□□ -1.3
CCDC171-203ENST00000449575 C3orf22Q8N5N4 141 aa6.9□□□□□ -1.3
CCDC171-203ENST00000449575 SDHAF1A6NFY7 115 aa6.9□□□□□ -1.31
CCDC171-203ENST00000449575 TRAV10A0A0B4J240 114 aa6.89□□□□□ -1.31
CCDC171-203ENST00000449575 IGIPA6NJ69 53 aa6.89□□□□□ -1.31
CCDC171-203ENST00000449575 AMELXQ99217 191 aa6.89□□□□□ -1.31
CCDC171-203ENST00000449575 SACSQ9NZJ4 4579 aa6.89□□□□□ -1.31
CCDC171-203ENST00000449575 TSPEAR-AS2P59090 65 aa6.89□□□□□ -1.31
CCDC171-203ENST00000449575 MUSTN1Q8IVN3 82 aa6.89□□□□□ -1.31
CCDC171-203ENST00000449575 RPL39LQ96EH5 51 aaKnown RBP6.89□□□□□ -1.31
CCDC171-203ENST00000449575 HYDINQ4G0P3 5121 aa6.88□□□□□ -1.31
CCDC171-203ENST00000449575 IGHV3-73A0A0B4J1V6 119 aa6.88□□□□□ -1.31
CCDC171-203ENST00000449575 C3orf84H3BNL1 204 aa6.88□□□□□ -1.31
CCDC171-203ENST00000449575 MGPP08493 103 aa6.88□□□□□ -1.31
CCDC171-203ENST00000449575 LINC00694P0DN24 101 aa6.88□□□□□ -1.31
CCDC171-203ENST00000449575 PHLDA3Q9Y5J5 127 aa6.88□□□□□ -1.31
CCDC171-203ENST00000449575 V9GYY9 64 aa6.88□□□□□ -1.31
CCDC171-203ENST00000449575 DNAH1Q9P2D7 4330 aa6.88□□□□□ -1.31
CCDC171-203ENST00000449575 H7C423 109 aa6.88□□□□□ -1.31
CCDC171-203ENST00000449575 OR13C6PQ8NH95 151 aa6.88□□□□□ -1.31
CCDC171-203ENST00000449575 LINC00526Q96FQ7 95 aa6.88□□□□□ -1.31
CCDC171-203ENST00000449575 FAM236AA0A1B0GUQ0 79 aa6.87□□□□□ -1.31
CCDC171-203ENST00000449575 FAM236BA0A1B0GV22 79 aa6.87□□□□□ -1.31
CCDC171-203ENST00000449575 NUPR2A6NF83 97 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms