RNA–Protein interactions for RNA: ENST00000449415.5

RFTN1-205, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS ALT2 TSL 3

Gene RFTN1, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-205ENST00000449415 APOC3P02656 99 aa11.44□□□□□ -0.58
RFTN1-205ENST00000449415 SYCNQ0VAF6 134 aa11.44□□□□□ -0.58
RFTN1-205ENST00000449415 CIRBPQ14011 172 aaKnown RBP11.44□□□□□ -0.58
RFTN1-205ENST00000449415 SPACA4Q8TDM5 124 aa11.44□□□□□ -0.58
RFTN1-205ENST00000449415 TMEM141Q96I45 108 aa11.44□□□□□ -0.58
RFTN1-205ENST00000449415 A0A087WYN8 130 aa11.43□□□□□ -0.58
RFTN1-205ENST00000449415 ZC2HC1BQ5TFG8 222 aa11.43□□□□□ -0.58
RFTN1-205ENST00000449415 APOMO95445 188 aa11.42□□□□□ -0.58
RFTN1-205ENST00000449415 MAJINQ3KP22 176 aa11.42□□□□□ -0.58
RFTN1-205ENST00000449415 A0A096LNI7 61 aa11.41□□□□□ -0.58
RFTN1-205ENST00000449415 IGHV3OR16-9A0A0B4J2B5 98 aa11.41□□□□□ -0.58
RFTN1-205ENST00000449415 K7EMI3 77 aa11.41□□□□□ -0.58
RFTN1-205ENST00000449415 RPL37AP61513 92 aaKnown RBP11.41□□□□□ -0.58
RFTN1-205ENST00000449415 SPAG11BQ08648 103 aa11.41□□□□□ -0.58
RFTN1-205ENST00000449415 FABP9Q0Z7S8 132 aa11.41□□□□□ -0.58
RFTN1-205ENST00000449415 TEX43Q6ZNM6 134 aa11.41□□□□□ -0.58
RFTN1-205ENST00000449415 Q6ZRU5 148 aa11.41□□□□□ -0.58
RFTN1-205ENST00000449415 CAMK2N2Q96S95 79 aa11.41□□□□□ -0.58
RFTN1-205ENST00000449415 MRPL18Q9H0U6 180 aaKnown RBP11.41□□□□□ -0.58
RFTN1-205ENST00000449415 TGIF2-C20orf24A0A0A6YYL0 155 aa11.4□□□□□ -0.58
RFTN1-205ENST00000449415 KRTAP10-4P60372 401 aaPredicted RBP11.4□□□□□ -0.58
RFTN1-205ENST00000449415 COX19Q49B96 90 aa11.4□□□□□ -0.58
RFTN1-205ENST00000449415 Q6ZN92 141 aa11.4□□□□□ -0.58
RFTN1-205ENST00000449415 ORAOV1Q8WV07 137 aa11.4□□□□□ -0.58
RFTN1-205ENST00000449415 ALKBH7Q9BT30 221 aaPredicted RBP11.4□□□□□ -0.58
RFTN1-205ENST00000449415 NDUFA5Q16718 116 aa11.39□□□□□ -0.59
RFTN1-205ENST00000449415 LINC00242Q5T6M2 205 aa11.39□□□□□ -0.59
RFTN1-205ENST00000449415 MT-ND6P03923 174 aa11.38□□□□□ -0.59
RFTN1-205ENST00000449415 LINC00173Q6ZV60 143 aa11.38□□□□□ -0.59
RFTN1-205ENST00000449415 C2orf88Q9BSF0 95 aa11.38□□□□□ -0.59
RFTN1-205ENST00000449415 VCX2Q9H322 139 aa11.38□□□□□ -0.59
RFTN1-205ENST00000449415 IGIPA6NJ69 53 aa11.37□□□□□ -0.59
RFTN1-205ENST00000449415 SNAPINO95295 136 aa11.37□□□□□ -0.59
RFTN1-205ENST00000449415 UBE2D1P51668 147 aa11.37□□□□□ -0.59
RFTN1-205ENST00000449415 SVBPQ8N300 66 aa11.37□□□□□ -0.59
RFTN1-205ENST00000449415 STPG4Q8N801 248 aa11.37□□□□□ -0.59
RFTN1-205ENST00000449415 OR10D4PQ8NGN7 298 aa11.37□□□□□ -0.59
RFTN1-205ENST00000449415 C2orf48Q96LS8 159 aa11.37□□□□□ -0.59
RFTN1-205ENST00000449415 PLAC8Q9NZF1 115 aa11.37□□□□□ -0.59
RFTN1-205ENST00000449415 A0A0J9YXV3 536 aa11.36□□□□□ -0.59
RFTN1-205ENST00000449415 GAGE2BQ13066 116 aa11.36□□□□□ -0.59
RFTN1-205ENST00000449415 TOMM6Q96B49 74 aa11.36□□□□□ -0.59
RFTN1-205ENST00000449415 AMELXQ99217 191 aa11.36□□□□□ -0.59
RFTN1-205ENST00000449415 PKIGQ9Y2B9 76 aa11.36□□□□□ -0.59
RFTN1-205ENST00000449415 G0S2P27469 103 aa11.35□□□□□ -0.59
RFTN1-205ENST00000449415 TRAPPC1Q9Y5R8 145 aa11.35□□□□□ -0.59
RFTN1-205ENST00000449415 A0A087WZ39 114 aa11.34□□□□□ -0.59
RFTN1-205ENST00000449415 LOC107984640A0A0U1RRK4 108 aa11.34□□□□□ -0.59
RFTN1-205ENST00000449415 FA2HQ7L5A8 372 aa11.34□□□□□ -0.59
RFTN1-205ENST00000449415 SCGB3A1Q96QR1 104 aa11.34□□□□□ -0.59
RFTN1-205ENST00000449415 NPSP0C0P6 89 aa11.33□□□□□ -0.6
RFTN1-205ENST00000449415 TIMM17AQ99595 171 aa11.33□□□□□ -0.6
RFTN1-205ENST00000449415 SMCO4Q9NRQ5 59 aa11.33□□□□□ -0.6
RFTN1-205ENST00000449415 PTTG1IPP53801 180 aa11.32□□□□□ -0.6
RFTN1-205ENST00000449415 RPL18AQ02543 176 aaKnown RBP11.32□□□□□ -0.6
RFTN1-205ENST00000449415 PAPPA-AS1Q5QFB9 102 aa11.32□□□□□ -0.6
RFTN1-205ENST00000449415 C10orf25Q5T742 122 aa11.32□□□□□ -0.6
RFTN1-205ENST00000449415 LINC00474Q9P2X8 69 aa11.32□□□□□ -0.6
RFTN1-205ENST00000449415 LINC01546A6NGU7 62 aa11.31□□□□□ -0.6
RFTN1-205ENST00000449415 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.31□□□□□ -0.6
RFTN1-205ENST00000449415 NDUFA1O15239 70 aa11.31□□□□□ -0.6
RFTN1-205ENST00000449415 HNRNPA3P51991 378 aaKnown RBP11.31□□□□□ -0.6
RFTN1-205ENST00000449415 UNQ6190/PRO20217Q6UXQ8 127 aa11.31□□□□□ -0.6
RFTN1-205ENST00000449415 ERASQ7Z444 233 aa11.31□□□□□ -0.6
RFTN1-205ENST00000449415 C7orf33Q8WU49 177 aa11.3□□□□□ -0.6
RFTN1-205ENST00000449415 MYCBP2O75592 4640 aa11.29□□□□□ -0.6
RFTN1-205ENST00000449415 DMBT1Q9UGM3 2413 aaPredicted RBP11.29□□□□□ -0.6
RFTN1-205ENST00000449415 KIAA0087Q14695 138 aa11.29□□□□□ -0.6
RFTN1-205ENST00000449415 MRPL35Q9NZE8 188 aaKnown RBP11.29□□□□□ -0.6
RFTN1-205ENST00000449415 J3QL48 77 aa11.28□□□□□ -0.6
RFTN1-205ENST00000449415 RNF151Q2KHN1 245 aa11.28□□□□□ -0.6
RFTN1-205ENST00000449415 C18orf32Q8TCD1 76 aa11.28□□□□□ -0.6
RFTN1-205ENST00000449415 GEMIN7Q9H840 131 aaKnown RBP11.28□□□□□ -0.6
RFTN1-205ENST00000449415 TOMM7Q9P0U1 55 aa11.28□□□□□ -0.6
RFTN1-205ENST00000449415 C6orf48Q9UBA6 75 aa11.28□□□□□ -0.6
RFTN1-205ENST00000449415 F8WDY8 70 aa11.27□□□□□ -0.61
RFTN1-205ENST00000449415 C2orf82Q6UX34 121 aa11.27□□□□□ -0.61
RFTN1-205ENST00000449415 FAM19A3Q7Z5A8 133 aa11.27□□□□□ -0.61
RFTN1-205ENST00000449415 CDKN2A-AS1Q9UH64 79 aa11.27□□□□□ -0.61
RFTN1-205ENST00000449415 HERVK_113P63121 156 aa11.26□□□□□ -0.61
RFTN1-205ENST00000449415 SLC7A5P1Q8MH63 180 aa11.26□□□□□ -0.61
RFTN1-205ENST00000449415 LINC01561Q8N1V8 128 aa11.26□□□□□ -0.61
RFTN1-205ENST00000449415 URB1-AS1Q96HZ7 61 aa11.26□□□□□ -0.61
RFTN1-205ENST00000449415 A0A1W2PNN7 141 aa11.25□□□□□ -0.61
RFTN1-205ENST00000449415 LINC01549A6NIU2 74 aa11.25□□□□□ -0.61
RFTN1-205ENST00000449415 PRSS2P07478 247 aa11.25□□□□□ -0.61
RFTN1-205ENST00000449415 SEC11AP67812 179 aa11.25□□□□□ -0.61
RFTN1-205ENST00000449415 YPEL4Q96NS1 127 aa11.25□□□□□ -0.61
RFTN1-205ENST00000449415 LINC00614P0C842 121 aa11.24□□□□□ -0.61
RFTN1-205ENST00000449415 PMCHL1Q16048 86 aa11.24□□□□□ -0.61
RFTN1-205ENST00000449415 C9orf116Q5BN46 136 aaPredicted RBP11.24□□□□□ -0.61
RFTN1-205ENST00000449415 CBLN2Q8IUK8 224 aa11.24□□□□□ -0.61
RFTN1-205ENST00000449415 PACRGQ96M98 296 aaPredicted RBP11.24□□□□□ -0.61
RFTN1-205ENST00000449415 A0A096LNJ9 63 aa11.23□□□□□ -0.61
RFTN1-205ENST00000449415 KRTAP29-1A8MX34 341 aaPredicted RBP11.23□□□□□ -0.61
RFTN1-205ENST00000449415 Q6ZRP5 223 aa11.23□□□□□ -0.61
RFTN1-205ENST00000449415 LINC00469Q8N7U9 141 aa11.23□□□□□ -0.61
RFTN1-205ENST00000449415 CST9LQ9H4G1 147 aa11.23□□□□□ -0.61
RFTN1-205ENST00000449415 PMVKQ15126 192 aa11.22□□□□□ -0.61
RFTN1-205ENST00000449415 GAGE2EQ4V326 116 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms