RNA–Protein interactions for RNA: ENST00000449223.3

RPS28-202, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 1,523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-202ENST00000449223 ATOH7Q8N100 152 aa12.93□□□□□ -0.34
RPS28-202ENST00000449223 CHCHD10Q8WYQ3 142 aaPredicted RBP12.93□□□□□ -0.34
RPS28-202ENST00000449223 LINC00476Q8WZB0 136 aa12.93□□□□□ -0.34
RPS28-202ENST00000449223 KRTAP1-5Q9BYS1 174 aa12.93□□□□□ -0.34
RPS28-202ENST00000449223 CDPF1Q6NVV7 123 aa12.93□□□□□ -0.34
RPS28-202ENST00000449223 NBDYA0A0U1RRE5 68 aa12.92□□□□□ -0.34
RPS28-202ENST00000449223 KRTAP26-1Q6PEX3 210 aa12.92□□□□□ -0.34
RPS28-202ENST00000449223 CDKN2A-AS1Q9UH64 79 aa12.92□□□□□ -0.34
RPS28-202ENST00000449223 XCL1P47992 114 aa12.91□□□□□ -0.34
RPS28-202ENST00000449223 TMEM170BQ5T4T1 132 aa12.91□□□□□ -0.34
RPS28-202ENST00000449223 LINC00469Q8N7U9 141 aa12.91□□□□□ -0.34
RPS28-202ENST00000449223 IGLV10-54A0A075B6I4 117 aa12.9□□□□□ -0.34
RPS28-202ENST00000449223 A0A087WZ39 114 aa12.9□□□□□ -0.34
RPS28-202ENST00000449223 LINC01561Q8N1V8 128 aa12.9□□□□□ -0.34
RPS28-202ENST00000449223 TMEM223A0PJW6 202 aa12.89□□□□□ -0.35
RPS28-202ENST00000449223 H3BRM9 83 aa12.89□□□□□ -0.35
RPS28-202ENST00000449223 FOXI1Q12951 378 aa12.89□□□□□ -0.35
RPS28-202ENST00000449223 C1orf43Q9BWL3 253 aa12.89□□□□□ -0.35
RPS28-202ENST00000449223 ALMS1Q8TCU4 4167 aa12.88□□□□□ -0.35
RPS28-202ENST00000449223 hDV102S1A0JD36 115 aa12.88□□□□□ -0.35
RPS28-202ENST00000449223 MAJINQ3KP22 176 aa12.88□□□□□ -0.35
RPS28-202ENST00000449223 LINC00518Q8N0U6 118 aa12.88□□□□□ -0.35
RPS28-202ENST00000449223 STPG4Q8N801 248 aa12.88□□□□□ -0.35
RPS28-202ENST00000449223 RMI2Q96E14 147 aa12.88□□□□□ -0.35
RPS28-202ENST00000449223 VAMP8Q9BV40 100 aa12.88□□□□□ -0.35
RPS28-202ENST00000449223 HSBP1L1C9JCN9 74 aa12.87□□□□□ -0.35
RPS28-202ENST00000449223 E9PLD3 99 aa12.87□□□□□ -0.35
RPS28-202ENST00000449223 COX11Q9Y6N1 276 aa12.87□□□□□ -0.35
RPS28-202ENST00000449223 IGLV5-39A0A0G2JS06 123 aa12.86□□□□□ -0.35
RPS28-202ENST00000449223 SMIM1B2RUZ4 78 aa12.86□□□□□ -0.35
RPS28-202ENST00000449223 HERVK_113P61574 105 aa12.86□□□□□ -0.35
RPS28-202ENST00000449223 Q6ZR54 194 aa12.86□□□□□ -0.35
RPS28-202ENST00000449223 C12orf57Q99622 126 aa12.86□□□□□ -0.35
RPS28-202ENST00000449223 GAGE12HA6NDE8 117 aa12.85□□□□□ -0.35
RPS28-202ENST00000449223 COX7A2LO14548 114 aa12.85□□□□□ -0.35
RPS28-202ENST00000449223 LY6G6CO95867 125 aa12.85□□□□□ -0.35
RPS28-202ENST00000449223 S100A12P80511 92 aa12.85□□□□□ -0.35
RPS28-202ENST00000449223 Q9HAA7 133 aa12.85□□□□□ -0.35
RPS28-202ENST00000449223 IGKV2D-24A0A075B6R9 120 aa12.84□□□□□ -0.35
RPS28-202ENST00000449223 ANKRD39Q53RE8 183 aa12.84□□□□□ -0.35
RPS28-202ENST00000449223 KMT2AQ03164 3969 aa12.83□□□□□ -0.35
RPS28-202ENST00000449223 IGHV1-58A0A0C4DH39 117 aa12.83□□□□□ -0.35
RPS28-202ENST00000449223 C5orf38Q86SI9 138 aa12.83□□□□□ -0.35
RPS28-202ENST00000449223 PAM16Q9Y3D7 125 aa12.83□□□□□ -0.35
RPS28-202ENST00000449223 SPINK8P0C7L1 97 aa12.83□□□□□ -0.36
RPS28-202ENST00000449223 SPATA45Q537H7 98 aa12.82□□□□□ -0.36
RPS28-202ENST00000449223 TM2D2Q9BX73 214 aa12.82□□□□□ -0.36
RPS28-202ENST00000449223 DNAH6Q9C0G6 4158 aa12.81□□□□□ -0.36
RPS28-202ENST00000449223 IGKV2D-26A0A0A0MRZ7 120 aa12.81□□□□□ -0.36
RPS28-202ENST00000449223 LEPROTO15243 131 aa12.8□□□□□ -0.36
RPS28-202ENST00000449223 IGHV3-64A0A075B6Q5 118 aa12.79□□□□□ -0.36
RPS28-202ENST00000449223 APOMO95445 188 aa12.78□□□□□ -0.36
RPS28-202ENST00000449223 MALP21145 153 aa12.78□□□□□ -0.36
RPS28-202ENST00000449223 Q6ZRN7 208 aaPredicted RBP12.78□□□□□ -0.36
RPS28-202ENST00000449223 PLEKHB2Q96CS7 222 aa12.78□□□□□ -0.36
RPS28-202ENST00000449223 J3QQQ9 107 aa12.78□□□□□ -0.36
RPS28-202ENST00000449223 MAPKAPK5-AS1Q8N8E1 139 aa12.78□□□□□ -0.36
RPS28-202ENST00000449223 TSPEAR-AS2P59090 65 aa12.77□□□□□ -0.37
RPS28-202ENST00000449223 NMUP48645 174 aa12.76□□□□□ -0.37
RPS28-202ENST00000449223 Q8IZM0 81 aa12.76□□□□□ -0.37
RPS28-202ENST00000449223 M0R2N4 97 aa12.75□□□□□ -0.37
RPS28-202ENST00000449223 COX8AP10176 69 aa12.75□□□□□ -0.37
RPS28-202ENST00000449223 KIAA0087Q14695 138 aa12.75□□□□□ -0.37
RPS28-202ENST00000449223 C15orf56Q8N910 161 aa12.75□□□□□ -0.37
RPS28-202ENST00000449223 LCE6AA0A183 80 aa12.74□□□□□ -0.37
RPS28-202ENST00000449223 C6orf223Q8N319 242 aa12.74□□□□□ -0.37
RPS28-202ENST00000449223 COX7B2Q8TF08 81 aa12.74□□□□□ -0.37
RPS28-202ENST00000449223 ORAOV1Q8WV07 137 aa12.74□□□□□ -0.37
RPS28-202ENST00000449223 DNAH10Q8IVF4 4471 aa12.74□□□□□ -0.37
RPS28-202ENST00000449223 DLEU1O43261 78 aa12.73□□□□□ -0.37
RPS28-202ENST00000449223 CFAP161Q6P656 301 aa12.73□□□□□ -0.37
RPS28-202ENST00000449223 GVQW2A0A096LPI5 108 aaPredicted RBP12.72□□□□□ -0.37
RPS28-202ENST00000449223 LGALS3P17931 250 aaKnown RBP12.72□□□□□ -0.37
RPS28-202ENST00000449223 PCP2Q8IVA1 136 aa12.72□□□□□ -0.37
RPS28-202ENST00000449223 BOD1L2Q8IYS8 172 aa12.72□□□□□ -0.37
RPS28-202ENST00000449223 SFTA2Q6UW10 78 aa12.72□□□□□ -0.37
RPS28-202ENST00000449223 DNAH2Q9P225 4427 aa12.71□□□□□ -0.37
RPS28-202ENST00000449223 CXCL5P42830 114 aa12.71□□□□□ -0.38
RPS28-202ENST00000449223 ZNF625Q96I27 306 aaPredicted RBP12.71□□□□□ -0.38
RPS28-202ENST00000449223 SACSQ9NZJ4 4579 aa12.7□□□□□ -0.38
RPS28-202ENST00000449223 NDUFA1O15239 70 aa12.7□□□□□ -0.38
RPS28-202ENST00000449223 PSCAO43653 123 aa12.7□□□□□ -0.38
RPS28-202ENST00000449223 SPAG11BQ08648 103 aa12.7□□□□□ -0.38
RPS28-202ENST00000449223 C14orf144Q96I85 54 aa12.7□□□□□ -0.38
RPS28-202ENST00000449223 TTTY13Q9BZ97 58 aa12.7□□□□□ -0.38
RPS28-202ENST00000449223 NDUFA12Q9UI09 145 aa12.7□□□□□ -0.38
RPS28-202ENST00000449223 USP17L23D6RBM5 183 aa12.69□□□□□ -0.38
RPS28-202ENST00000449223 PRSS2P07478 247 aa12.69□□□□□ -0.38
RPS28-202ENST00000449223 C1orf134Q5TEV5 83 aa12.69□□□□□ -0.38
RPS28-202ENST00000449223 SLC25A34Q6PIV7 304 aa12.69□□□□□ -0.38
RPS28-202ENST00000449223 TOMM7Q9P0U1 55 aa12.69□□□□□ -0.38
RPS28-202ENST00000449223 MYMXA0A1B0GTQ4 84 aa12.68□□□□□ -0.38
RPS28-202ENST00000449223 F8WDY8 70 aa12.68□□□□□ -0.38
RPS28-202ENST00000449223 C6orf226Q5I0X4 101 aa12.68□□□□□ -0.38
RPS28-202ENST00000449223 ZNF815PA8K554 130 aa12.67□□□□□ -0.38
RPS28-202ENST00000449223 NTN5Q8WTR8 489 aaPredicted RBP12.67□□□□□ -0.38
RPS28-202ENST00000449223 C2orf48Q96LS8 159 aa12.67□□□□□ -0.38
RPS28-202ENST00000449223 LRCOL1A6NCL2 159 aa12.67□□□□□ -0.38
RPS28-202ENST00000449223 TSTD3H0UI37 97 aa12.67□□□□□ -0.38
RPS28-202ENST00000449223 ZNF561-AS1K7EIQ3 104 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms