RNA–Protein interactions for RNA: ENST00000449082.2

SCN10A-201, Transcript of sodium voltage-gated channel alpha subunit 10, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN10A, Length 6,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10A-201ENST00000449082 ZNF580Q9UK33 172 aa7.41□□□□□ -1.22
SCN10A-201ENST00000449082 TEX49A0A1B0GTD5 131 aa7.41□□□□□ -1.22
SCN10A-201ENST00000449082 PLAC8L1A1L4L8 177 aa7.41□□□□□ -1.22
SCN10A-201ENST00000449082 BRI3O95415 125 aa7.41□□□□□ -1.22
SCN10A-201ENST00000449082 EDN2P20800 178 aa7.4□□□□□ -1.22
SCN10A-201ENST00000449082 RETNQ9HD89 108 aa7.4□□□□□ -1.22
SCN10A-201ENST00000449082 A0A1W2PPR1 153 aa7.4□□□□□ -1.23
SCN10A-201ENST00000449082 RPL37AP8A6NKH3 93 aa7.4□□□□□ -1.23
SCN10A-201ENST00000449082 SCXQ7RTU7 201 aa7.4□□□□□ -1.23
SCN10A-201ENST00000449082 CNFNQ9BYD5 112 aa7.4□□□□□ -1.23
SCN10A-201ENST00000449082 TP73-AS1Q9UF72 201 aa7.39□□□□□ -1.23
SCN10A-201ENST00000449082 ATG2AQ2TAZ0 1938 aa7.39□□□□□ -1.23
SCN10A-201ENST00000449082 MRPS12O15235 138 aaKnown RBP7.39□□□□□ -1.23
SCN10A-201ENST00000449082 Q6ZQY7 126 aa7.39□□□□□ -1.23
SCN10A-201ENST00000449082 WFDC10BQ8IUB3 73 aa7.39□□□□□ -1.23
SCN10A-201ENST00000449082 PLXNB1O43157 2135 aa7.39□□□□□ -1.23
SCN10A-201ENST00000449082 SPINK6Q6UWN8 80 aa7.38□□□□□ -1.23
SCN10A-201ENST00000449082 SDIM1Q6ZPB5 146 aa7.38□□□□□ -1.23
SCN10A-201ENST00000449082 RAI1Q7Z5J4 1906 aaPredicted RBP7.38□□□□□ -1.23
SCN10A-201ENST00000449082 CYSRT1A8MQ03 144 aa7.38□□□□□ -1.23
SCN10A-201ENST00000449082 RNASE8Q8TDE3 154 aaKnown RBP7.38□□□□□ -1.23
SCN10A-201ENST00000449082 J3KT08 172 aa7.38□□□□□ -1.23
SCN10A-201ENST00000449082 NDUFC2O95298 119 aa7.38□□□□□ -1.23
SCN10A-201ENST00000449082 ENHOQ6UWT2 76 aa7.38□□□□□ -1.23
SCN10A-201ENST00000449082 ZNF73O43830 326 aaPredicted RBP7.37□□□□□ -1.23
SCN10A-201ENST00000449082 C3orf84H3BNL1 204 aa7.37□□□□□ -1.23
SCN10A-201ENST00000449082 HRCT1Q6UXD1 115 aa7.37□□□□□ -1.23
SCN10A-201ENST00000449082 PIEZO1Q92508 2521 aa7.37□□□□□ -1.23
SCN10A-201ENST00000449082 ARHGAP32A7KAX9 2087 aa7.37□□□□□ -1.23
SCN10A-201ENST00000449082 YPEL4Q96NS1 127 aa7.37□□□□□ -1.23
SCN10A-201ENST00000449082 SMIM11BQ8TCY0 68 aa7.37□□□□□ -1.23
SCN10A-201ENST00000449082 IGLV9-49A0A0B4J1Y8 123 aa7.36□□□□□ -1.23
SCN10A-201ENST00000449082 NCOR2Q9Y618 2525 aa7.36□□□□□ -1.23
SCN10A-201ENST00000449082 EGFEM1PQ0D2K5 195 aa7.36□□□□□ -1.23
SCN10A-201ENST00000449082 GAS8-AS1O95177 125 aa7.35□□□□□ -1.23
SCN10A-201ENST00000449082 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.35□□□□□ -1.23
SCN10A-201ENST00000449082 Q6ZTC4 211 aa7.35□□□□□ -1.23
SCN10A-201ENST00000449082 CCDC168Q8NDH2 2452 aa7.35□□□□□ -1.23
SCN10A-201ENST00000449082 RPL28P46779 137 aaKnown RBP7.35□□□□□ -1.23
SCN10A-201ENST00000449082 M0QXV9 152 aa7.35□□□□□ -1.23
SCN10A-201ENST00000449082 FHL2Q14192 279 aa7.35□□□□□ -1.23
SCN10A-201ENST00000449082 IGIPA6NJ69 53 aa7.34□□□□□ -1.23
SCN10A-201ENST00000449082 LINC00242Q5T6M2 205 aa7.34□□□□□ -1.23
SCN10A-201ENST00000449082 IGLV5-52A0A0A0MRZ9 124 aa7.34□□□□□ -1.23
SCN10A-201ENST00000449082 C20orf197Q8N268 126 aa7.33□□□□□ -1.24
SCN10A-201ENST00000449082 UNQ6190/PRO20217Q6UXQ8 127 aa7.33□□□□□ -1.24
SCN10A-201ENST00000449082 POM121L12Q8N7R1 296 aa7.33□□□□□ -1.24
SCN10A-201ENST00000449082 CPAMD8Q8IZJ3 1885 aa7.33□□□□□ -1.24
SCN10A-201ENST00000449082 LST1O00453 97 aa7.33□□□□□ -1.24
SCN10A-201ENST00000449082 IGF2RP11717 2491 aa7.33□□□□□ -1.24
SCN10A-201ENST00000449082 C10orf25Q5T742 122 aa7.33□□□□□ -1.24
SCN10A-201ENST00000449082 NHLRC4P0CG21 123 aaPredicted RBP7.31□□□□□ -1.24
SCN10A-201ENST00000449082 C3orf22Q8N5N4 141 aa7.31□□□□□ -1.24
SCN10A-201ENST00000449082 C6orf223Q8N319 242 aa7.31□□□□□ -1.24
SCN10A-201ENST00000449082 ADAMTS20P59510 1910 aa7.31□□□□□ -1.24
SCN10A-201ENST00000449082 F8WDY8 70 aa7.31□□□□□ -1.24
SCN10A-201ENST00000449082 UQCRQO14949 82 aa7.31□□□□□ -1.24
SCN10A-201ENST00000449082 NDUFV3P56181 108 aaKnown RBP7.31□□□□□ -1.24
SCN10A-201ENST00000449082 REG3GQ6UW15 175 aa7.31□□□□□ -1.24
SCN10A-201ENST00000449082 WFDC13Q8IUB5 93 aa7.31□□□□□ -1.24
SCN10A-201ENST00000449082 MT-ATP8P03928 68 aa7.3□□□□□ -1.24
SCN10A-201ENST00000449082 IGLV4-60A0A075B6I1 120 aa7.3□□□□□ -1.24
SCN10A-201ENST00000449082 SMIM1B2RUZ4 78 aa7.3□□□□□ -1.24
SCN10A-201ENST00000449082 BEAN1Q3B7T3 259 aa7.3□□□□□ -1.24
SCN10A-201ENST00000449082 C1orf134Q5TEV5 83 aa7.3□□□□□ -1.24
SCN10A-201ENST00000449082 C2orf91Q6ZV80 131 aa7.3□□□□□ -1.24
SCN10A-201ENST00000449082 CSDC2Q9Y534 153 aaKnown RBP7.3□□□□□ -1.24
SCN10A-201ENST00000449082 MYO18BQ8IUG5 2567 aa7.29□□□□□ -1.24
SCN10A-201ENST00000449082 K7ERS5 55 aa7.29□□□□□ -1.24
SCN10A-201ENST00000449082 COX8CQ7Z4L0 72 aa7.29□□□□□ -1.24
SCN10A-201ENST00000449082 C9orf116Q5BN46 136 aaPredicted RBP7.28□□□□□ -1.24
SCN10A-201ENST00000449082 FAM236DA0A1B0GTK5 79 aa7.28□□□□□ -1.24
SCN10A-201ENST00000449082 LINC00694P0DN24 101 aa7.28□□□□□ -1.24
SCN10A-201ENST00000449082 FAM236CP0DP71 79 aa7.28□□□□□ -1.24
SCN10A-201ENST00000449082 COX6A2Q02221 97 aa7.28□□□□□ -1.24
SCN10A-201ENST00000449082 ABCA2Q9BZC7 2435 aa7.28□□□□□ -1.24
SCN10A-201ENST00000449082 LYPD5Q6UWN5 251 aa7.28□□□□□ -1.24
SCN10A-201ENST00000449082 TRBV10-3A0A0K0K1G6 114 aa7.27□□□□□ -1.25
SCN10A-201ENST00000449082 FAM19A3Q7Z5A8 133 aa7.27□□□□□ -1.25
SCN10A-201ENST00000449082 PRR15LQ9BU68 103 aa7.27□□□□□ -1.25
SCN10A-201ENST00000449082 EXPH5Q8NEV8 1989 aa7.27□□□□□ -1.25
SCN10A-201ENST00000449082 A0A1B0GUV1 79 aa7.27□□□□□ -1.25
SCN10A-201ENST00000449082 EML5Q05BV3 1969 aa7.27□□□□□ -1.25
SCN10A-201ENST00000449082 PIEZO2Q9H5I5 2752 aa7.26□□□□□ -1.25
SCN10A-201ENST00000449082 Q8N2B8 174 aa7.26□□□□□ -1.25
SCN10A-201ENST00000449082 C2orf48Q96LS8 159 aa7.26□□□□□ -1.25
SCN10A-201ENST00000449082 CIRBP-AS1Q8TBR5 109 aa7.26□□□□□ -1.25
SCN10A-201ENST00000449082 NDUFC2-KCTD14E9PQ53 114 aa7.26□□□□□ -1.25
SCN10A-201ENST00000449082 FSHBP01225 129 aa7.26□□□□□ -1.25
SCN10A-201ENST00000449082 AMELXQ99217 191 aa7.26□□□□□ -1.25
SCN10A-201ENST00000449082 IMUPQ9GZP8 106 aa7.25□□□□□ -1.25
SCN10A-201ENST00000449082 NDUFC1O43677 76 aa7.25□□□□□ -1.25
SCN10A-201ENST00000449082 Q8N9L7 120 aa7.25□□□□□ -1.25
SCN10A-201ENST00000449082 NTM-AS1Q6ZSK4 140 aa7.25□□□□□ -1.25
SCN10A-201ENST00000449082 FHL3Q13643 280 aa7.25□□□□□ -1.25
SCN10A-201ENST00000449082 LINC01556Q5JQF7 62 aa7.25□□□□□ -1.25
SCN10A-201ENST00000449082 MRPL55Q7Z7F7 128 aaKnown RBP7.25□□□□□ -1.25
SCN10A-201ENST00000449082 C1orf137Q5JT78 98 aa7.24□□□□□ -1.25
SCN10A-201ENST00000449082 Q8N814 137 aa7.24□□□□□ -1.25
SCN10A-201ENST00000449082 Q6ZSN1 163 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms