RNA–Protein interactions for RNA: ENST00000448192.1

DDX56-207, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-207ENST00000448192 MRPS36P82909 103 aaKnown RBP11.09□□□□□ -0.63
DDX56-207ENST00000448192 SPAG11BQ08648 103 aa11.09□□□□□ -0.63
DDX56-207ENST00000448192 C2orf48Q96LS8 159 aa11.09□□□□□ -0.63
DDX56-207ENST00000448192 HMCN2Q8NDA2 5059 aa11.08□□□□□ -0.64
DDX56-207ENST00000448192 PTTG1IPP53801 180 aa11.08□□□□□ -0.64
DDX56-207ENST00000448192 PRR3P79522 188 aaKnown RBP11.08□□□□□ -0.64
DDX56-207ENST00000448192 IFI27P40305 119 aaPredicted RBP11.07□□□□□ -0.64
DDX56-207ENST00000448192 ORAOV1Q8WV07 137 aa11.07□□□□□ -0.64
DDX56-207ENST00000448192 MAP1LC3AQ9H492 121 aa11.07□□□□□ -0.64
DDX56-207ENST00000448192 IGHV3OR16-9A0A0B4J2B5 98 aa11.06□□□□□ -0.64
DDX56-207ENST00000448192 OR10D4PQ8NGN7 298 aa11.06□□□□□ -0.64
DDX56-207ENST00000448192 LAMTOR2Q9Y2Q5 125 aa11.06□□□□□ -0.64
DDX56-207ENST00000448192 A0A0J9YXV3 536 aa11.05□□□□□ -0.64
DDX56-207ENST00000448192 RPL18AQ02543 176 aaKnown RBP11.05□□□□□ -0.64
DDX56-207ENST00000448192 CLLU1Q5K131 121 aa11.05□□□□□ -0.64
DDX56-207ENST00000448192 PRSS47A8MTI9 375 aa11.04□□□□□ -0.64
DDX56-207ENST00000448192 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.04□□□□□ -0.64
DDX56-207ENST00000448192 MT1HL1P0DM35 61 aa11.04□□□□□ -0.64
DDX56-207ENST00000448192 PYGO1Q9Y3Y4 419 aa11.04□□□□□ -0.64
DDX56-207ENST00000448192 IGLV4-3A0A075B6K6 122 aa11.03□□□□□ -0.64
DDX56-207ENST00000448192 TGIF2-C20orf24A0A0A6YYL0 155 aa11.03□□□□□ -0.64
DDX56-207ENST00000448192 Q8N8P6 123 aa11.03□□□□□ -0.64
DDX56-207ENST00000448192 A0A1W2PNN7 141 aa11.02□□□□□ -0.65
DDX56-207ENST00000448192 RNF151Q2KHN1 245 aa11.02□□□□□ -0.65
DDX56-207ENST00000448192 TMEM141Q96I45 108 aa11.02□□□□□ -0.65
DDX56-207ENST00000448192 CTDSP1Q9GZU7 261 aa11.01□□□□□ -0.65
DDX56-207ENST00000448192 PLA2G2DQ9UNK4 145 aa11.01□□□□□ -0.65
DDX56-207ENST00000448192 CYSLTR1Q9Y271 337 aa11.01□□□□□ -0.65
DDX56-207ENST00000448192 F8WDY8 70 aa11□□□□□ -0.65
DDX56-207ENST00000448192 NDUFA1O15239 70 aa11□□□□□ -0.65
DDX56-207ENST00000448192 C9orf116Q5BN46 136 aaPredicted RBP11□□□□□ -0.65
DDX56-207ENST00000448192 LINC00242Q5T6M2 205 aa11□□□□□ -0.65
DDX56-207ENST00000448192 C2orf66Q6UXQ4 117 aa11□□□□□ -0.65
DDX56-207ENST00000448192 TEX43Q6ZNM6 134 aa11□□□□□ -0.65
DDX56-207ENST00000448192 Q6ZRP5 223 aa11□□□□□ -0.65
DDX56-207ENST00000448192 MRPL35Q9NZE8 188 aaKnown RBP11□□□□□ -0.65
DDX56-207ENST00000448192 TNXBP22105 4242 aa11□□□□□ -0.65
DDX56-207ENST00000448192 ORMDL2Q53FV1 153 aa10.99□□□□□ -0.65
DDX56-207ENST00000448192 C10orf25Q5T742 122 aa10.99□□□□□ -0.65
DDX56-207ENST00000448192 A0A087WZ39 114 aa10.98□□□□□ -0.65
DDX56-207ENST00000448192 ADCYAP1P18509 176 aa10.98□□□□□ -0.65
DDX56-207ENST00000448192 ZC2HC1BQ5TFG8 222 aa10.98□□□□□ -0.65
DDX56-207ENST00000448192 UNQ6190/PRO20217Q6UXQ8 127 aa10.98□□□□□ -0.65
DDX56-207ENST00000448192 Q6ZN92 141 aa10.98□□□□□ -0.65
DDX56-207ENST00000448192 IMMP2LQ96T52 175 aa10.98□□□□□ -0.65
DDX56-207ENST00000448192 C2orf88Q9BSF0 95 aa10.98□□□□□ -0.65
DDX56-207ENST00000448192 UBE2D1P51668 147 aa10.97□□□□□ -0.65
DDX56-207ENST00000448192 UQCC3Q6UW78 93 aa10.97□□□□□ -0.65
DDX56-207ENST00000448192 SPINK6Q6UWN8 80 aa10.97□□□□□ -0.65
DDX56-207ENST00000448192 VCX2Q9H322 139 aa10.97□□□□□ -0.65
DDX56-207ENST00000448192 TMEM218A2RU14 115 aa10.96□□□□□ -0.65
DDX56-207ENST00000448192 K7EMI3 77 aa10.96□□□□□ -0.65
DDX56-207ENST00000448192 IFITM2Q01629 132 aa10.96□□□□□ -0.65
DDX56-207ENST00000448192 NXT2Q9NPJ8 142 aaKnown RBP10.96□□□□□ -0.65
DDX56-207ENST00000448192 C6orf48Q9UBA6 75 aa10.96□□□□□ -0.65
DDX56-207ENST00000448192 KIAA0087Q14695 138 aa10.95□□□□□ -0.66
DDX56-207ENST00000448192 KIAA1644Q3SXP7 199 aa10.95□□□□□ -0.66
DDX56-207ENST00000448192 LINC00173Q6ZV60 143 aa10.95□□□□□ -0.66
DDX56-207ENST00000448192 PHF5AQ7RTV0 110 aaKnown RBP10.95□□□□□ -0.66
DDX56-207ENST00000448192 LINC01600Q96MT4 127 aa10.95□□□□□ -0.66
DDX56-207ENST00000448192 REG3GQ6UW15 175 aa10.94□□□□□ -0.66
DDX56-207ENST00000448192 AMELXQ99217 191 aa10.94□□□□□ -0.66
DDX56-207ENST00000448192 IGIPA6NJ69 53 aa10.93□□□□□ -0.66
DDX56-207ENST00000448192 MT-ND6P03923 174 aa10.93□□□□□ -0.66
DDX56-207ENST00000448192 TLX1NBP0CAT3 122 aa10.93□□□□□ -0.66
DDX56-207ENST00000448192 SRSF9Q13242 221 aaKnown RBP eCLIP10.93□□□□□ -0.66
DDX56-207ENST00000448192 GAGE2EQ4V326 116 aa10.93□□□□□ -0.66
DDX56-207ENST00000448192 C2orf82Q6UX34 121 aa10.93□□□□□ -0.66
DDX56-207ENST00000448192 GAGE2DQ9UEU5 116 aa10.93□□□□□ -0.66
DDX56-207ENST00000448192 PSORS1C2Q9UIG4 136 aa10.93□□□□□ -0.66
DDX56-207ENST00000448192 UBR4Q5T4S7 5183 aa10.93□□□□□ -0.66
DDX56-207ENST00000448192 TRAV9-1A0A075B6T8 112 aa10.92□□□□□ -0.66
DDX56-207ENST00000448192 FAM168BA1KXE4 195 aa10.92□□□□□ -0.66
DDX56-207ENST00000448192 NPSP0C0P6 89 aa10.91□□□□□ -0.66
DDX56-207ENST00000448192 S100PP25815 95 aa10.91□□□□□ -0.66
DDX56-207ENST00000448192 G0S2P27469 103 aa10.91□□□□□ -0.66
DDX56-207ENST00000448192 LINC01561Q8N1V8 128 aa10.91□□□□□ -0.66
DDX56-207ENST00000448192 PACRGQ96M98 296 aaPredicted RBP10.91□□□□□ -0.66
DDX56-207ENST00000448192 SEC11CQ9BY50 192 aa10.91□□□□□ -0.66
DDX56-207ENST00000448192 TRBV30A0A0K0K1B3 111 aa10.9□□□□□ -0.66
DDX56-207ENST00000448192 PRSS2P07478 247 aa10.9□□□□□ -0.66
DDX56-207ENST00000448192 PAPPA-AS1Q5QFB9 102 aa10.9□□□□□ -0.66
DDX56-207ENST00000448192 FAM19A5Q7Z5A7 132 aaPredicted RBP10.9□□□□□ -0.66
DDX56-207ENST00000448192 TOMM7Q9P0U1 55 aa10.9□□□□□ -0.66
DDX56-207ENST00000448192 C1orf137Q5JT78 98 aa10.89□□□□□ -0.67
DDX56-207ENST00000448192 COMMD7Q86VX2 200 aa10.89□□□□□ -0.67
DDX56-207ENST00000448192 TOMM6Q96B49 74 aa10.89□□□□□ -0.67
DDX56-207ENST00000448192 TIMM17AQ99595 171 aa10.88□□□□□ -0.67
DDX56-207ENST00000448192 NDUFC2-KCTD14E9PQ53 114 aa10.87□□□□□ -0.67
DDX56-207ENST00000448192 CKS1BP61024 79 aa10.87□□□□□ -0.67
DDX56-207ENST00000448192 HERVK_113P63121 156 aa10.87□□□□□ -0.67
DDX56-207ENST00000448192 C6orf226Q5I0X4 101 aa10.87□□□□□ -0.67
DDX56-207ENST00000448192 FAM19A3Q7Z5A8 133 aa10.87□□□□□ -0.67
DDX56-207ENST00000448192 SCGB3A1Q96QR1 104 aa10.87□□□□□ -0.67
DDX56-207ENST00000448192 GNB1LQ9BYB4 327 aa10.87□□□□□ -0.67
DDX56-207ENST00000448192 GEMIN7Q9H840 131 aaKnown RBP10.87□□□□□ -0.67
DDX56-207ENST00000448192 SEC11AP67812 179 aa10.86□□□□□ -0.67
DDX56-207ENST00000448192 ODF1Q14990 250 aa10.86□□□□□ -0.67
DDX56-207ENST00000448192 ERASQ7Z444 233 aa10.86□□□□□ -0.67
DDX56-207ENST00000448192 ALKBH7Q9BT30 221 aaPredicted RBP10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms