RNA–Protein interactions for RNA: ENST00000447360.6

LRRC28-203, Transcript of leucine rich repeat containing 28, humanhuman

TSL 1 (best) BASIC

Gene LRRC28, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-203ENST00000447360 NAT8BQ9UHF3 227 aa4.33□□□□□ -1.72
LRRC28-203ENST00000447360 TRBV27A0A0K0K1C4 114 aa4.32□□□□□ -1.72
LRRC28-203ENST00000447360 APCSP02743 223 aa4.32□□□□□ -1.72
LRRC28-203ENST00000447360 FGF6P10767 208 aa4.32□□□□□ -1.72
LRRC28-203ENST00000447360 FOXI1Q12951 378 aa4.32□□□□□ -1.72
LRRC28-203ENST00000447360 UBE2V1Q13404 147 aa4.32□□□□□ -1.72
LRRC28-203ENST00000447360 MRPL51Q4U2R6 128 aaKnown RBP4.32□□□□□ -1.72
LRRC28-203ENST00000447360 FAM104BQ5XKR9 115 aa4.32□□□□□ -1.72
LRRC28-203ENST00000447360 UQCC3Q6UW78 93 aa4.32□□□□□ -1.72
LRRC28-203ENST00000447360 PRR26Q8N8Z3 221 aa4.32□□□□□ -1.72
LRRC28-203ENST00000447360 MRAP2Q96G30 205 aa4.32□□□□□ -1.72
LRRC28-203ENST00000447360 ST20Q9HBF5 79 aa4.32□□□□□ -1.72
LRRC28-203ENST00000447360 IFITM2Q01629 132 aa4.31□□□□□ -1.72
LRRC28-203ENST00000447360 LBHQ53QV2 105 aaPredicted RBP4.31□□□□□ -1.72
LRRC28-203ENST00000447360 RNASEKQ6P5S7 137 aaKnown RBP4.31□□□□□ -1.72
LRRC28-203ENST00000447360 TMEM242Q9NWH2 141 aa4.31□□□□□ -1.72
LRRC28-203ENST00000447360 CRCT1Q9UGL9 99 aa4.31□□□□□ -1.72
LRRC28-203ENST00000447360 PAM16Q9Y3D7 125 aa4.31□□□□□ -1.72
LRRC28-203ENST00000447360 TRBV24-1A0A075B6N3 115 aa4.3□□□□□ -1.72
LRRC28-203ENST00000447360 GVQW2A0A096LPI5 108 aaPredicted RBP4.3□□□□□ -1.72
LRRC28-203ENST00000447360 IGKV3OR2-268A0A0C4DH90 116 aa4.3□□□□□ -1.72
LRRC28-203ENST00000447360 A0A1B0GXF2 115 aa4.3□□□□□ -1.72
LRRC28-203ENST00000447360 LINC00862A6NCI5 91 aa4.3□□□□□ -1.72
LRRC28-203ENST00000447360 HIGD2BQ4VC39 106 aa4.3□□□□□ -1.72
LRRC28-203ENST00000447360 AMMECR1LQ6DCA0 310 aa4.3□□□□□ -1.72
LRRC28-203ENST00000447360 MRPL52Q86TS9 123 aaKnown RBP4.3□□□□□ -1.72
LRRC28-203ENST00000447360 OR5A1Q8NGJ0 315 aa4.3□□□□□ -1.72
LRRC28-203ENST00000447360 CHCHD10Q8WYQ3 142 aaPredicted RBP4.3□□□□□ -1.72
LRRC28-203ENST00000447360 CDC42SE2Q9NRR3 84 aa4.3□□□□□ -1.72
LRRC28-203ENST00000447360 IGLV1-50A0A075B6I6 118 aa4.29□□□□□ -1.72
LRRC28-203ENST00000447360 LINC00959A0A1B0GUT2 108 aa4.29□□□□□ -1.72
LRRC28-203ENST00000447360 A0A1B0GW15 77 aa4.29□□□□□ -1.72
LRRC28-203ENST00000447360 PPP1R17O96001 155 aa4.29□□□□□ -1.72
LRRC28-203ENST00000447360 ZNF25P17030 456 aaPredicted RBP4.29□□□□□ -1.72
LRRC28-203ENST00000447360 SEC61BP60468 96 aaKnown RBP4.29□□□□□ -1.72
LRRC28-203ENST00000447360 MRPL54Q6P161 138 aaKnown RBP4.29□□□□□ -1.72
LRRC28-203ENST00000447360 DIRC1Q969H9 104 aa4.29□□□□□ -1.72
LRRC28-203ENST00000447360 FAM104AQ969W3 186 aa4.29□□□□□ -1.72
LRRC28-203ENST00000447360 C20orf78Q9BR46 151 aa4.29□□□□□ -1.72
LRRC28-203ENST00000447360 C7orf77A4D0Y5 90 aa4.28□□□□□ -1.72
LRRC28-203ENST00000447360 MT-ND6P03923 174 aa4.28□□□□□ -1.72
LRRC28-203ENST00000447360 CKS2P33552 79 aa4.28□□□□□ -1.72
LRRC28-203ENST00000447360 RPL32P62910 135 aaKnown RBP4.28□□□□□ -1.72
LRRC28-203ENST00000447360 TMEM101Q96IK0 257 aa4.28□□□□□ -1.72
LRRC28-203ENST00000447360 BTF3L4Q96K17 158 aa4.28□□□□□ -1.72
LRRC28-203ENST00000447360 UBE2D4Q9Y2X8 147 aa4.28□□□□□ -1.72
LRRC28-203ENST00000447360 CSDC2Q9Y534 153 aaKnown RBP4.28□□□□□ -1.72
LRRC28-203ENST00000447360 MUC17Q685J3 4493 aa4.27□□□□□ -1.73
LRRC28-203ENST00000447360 D6R8Y8 96 aa4.27□□□□□ -1.73
LRRC28-203ENST00000447360 PPP1R2P9O14990 202 aa4.27□□□□□ -1.73
LRRC28-203ENST00000447360 CCL25O15444 150 aa4.27□□□□□ -1.73
LRRC28-203ENST00000447360 NPYP01303 97 aa4.27□□□□□ -1.73
LRRC28-203ENST00000447360 FCER1GP30273 86 aa4.27□□□□□ -1.73
LRRC28-203ENST00000447360 XCL1P47992 114 aa4.27□□□□□ -1.73
LRRC28-203ENST00000447360 HBBP68871 147 aa4.27□□□□□ -1.73
LRRC28-203ENST00000447360 PNRC1Q12796 327 aaPredicted RBP4.27□□□□□ -1.73
LRRC28-203ENST00000447360 C1orf137Q5JT78 98 aa4.27□□□□□ -1.73
LRRC28-203ENST00000447360 F8W036 122 aa4.26□□□□□ -1.73
LRRC28-203ENST00000447360 H0Y9J4 135 aa4.26□□□□□ -1.73
LRRC28-203ENST00000447360 S100A8P05109 93 aa4.26□□□□□ -1.73
LRRC28-203ENST00000447360 RPL13AP40429 203 aaKnown RBP4.26□□□□□ -1.73
LRRC28-203ENST00000447360 RPL39P62891 51 aaKnown RBP4.26□□□□□ -1.73
LRRC28-203ENST00000447360 SS18Q15532 418 aa4.26□□□□□ -1.73
LRRC28-203ENST00000447360 RNASE13Q5GAN3 156 aaKnown RBP4.26□□□□□ -1.73
LRRC28-203ENST00000447360 CD164L2Q6UWJ8 174 aa4.26□□□□□ -1.73
LRRC28-203ENST00000447360 TMEM136Q6ZRR5 245 aa4.26□□□□□ -1.73
LRRC28-203ENST00000447360 Q75L30 129 aa4.26□□□□□ -1.73
LRRC28-203ENST00000447360 ATP5L2Q7Z4Y8 100 aa4.26□□□□□ -1.73
LRRC28-203ENST00000447360 LINC00526Q96FQ7 95 aa4.26□□□□□ -1.73
LRRC28-203ENST00000447360 CARD19Q96LW7 228 aa4.26□□□□□ -1.73
LRRC28-203ENST00000447360 KIR2DL4Q99706 377 aa4.26□□□□□ -1.73
LRRC28-203ENST00000447360 TIMM21Q9BVV7 248 aa4.26□□□□□ -1.73
LRRC28-203ENST00000447360 SMIM2Q9BVW6 85 aa4.26□□□□□ -1.73
LRRC28-203ENST00000447360 A0A1W2PNN7 141 aa4.25□□□□□ -1.73
LRRC28-203ENST00000447360 TMEM218A2RU14 115 aa4.25□□□□□ -1.73
LRRC28-203ENST00000447360 F8WDY8 70 aa4.25□□□□□ -1.73
LRRC28-203ENST00000447360 TCAPO15273 167 aa4.25□□□□□ -1.73
LRRC28-203ENST00000447360 PPBPP02775 128 aa4.25□□□□□ -1.73
LRRC28-203ENST00000447360 MT-ND4LP03901 98 aa4.25□□□□□ -1.73
LRRC28-203ENST00000447360 IGLV7-43P04211 117 aa4.25□□□□□ -1.73
LRRC28-203ENST00000447360 ADCYAP1P18509 176 aa4.25□□□□□ -1.73
LRRC28-203ENST00000447360 KRTAP19-4Q3LI73 84 aa4.25□□□□□ -1.73
LRRC28-203ENST00000447360 OPRPNQ99935 248 aaPredicted RBP4.25□□□□□ -1.73
LRRC28-203ENST00000447360 SEC11CQ9BY50 192 aa4.25□□□□□ -1.73
LRRC28-203ENST00000447360 KRTAP3-1Q9BYR8 98 aa4.25□□□□□ -1.73
LRRC28-203ENST00000447360 IGHV1-58A0A0C4DH39 117 aa4.24□□□□□ -1.73
LRRC28-203ENST00000447360 KRTAP4-8A0A0G2JLE6 195 aa4.24□□□□□ -1.73
LRRC28-203ENST00000447360 LOC107984640A0A0U1RRK4 108 aa4.24□□□□□ -1.73
LRRC28-203ENST00000447360 C1orf196B1AJZ1 125 aa4.24□□□□□ -1.73
LRRC28-203ENST00000447360 KRTAP1-4P0C5Y4 121 aa4.24□□□□□ -1.73
LRRC28-203ENST00000447360 UBE2D1P51668 147 aa4.24□□□□□ -1.73
LRRC28-203ENST00000447360 SYCNQ0VAF6 134 aa4.24□□□□□ -1.73
LRRC28-203ENST00000447360 C10orf91Q5T1B1 145 aa4.24□□□□□ -1.73
LRRC28-203ENST00000447360 Q6ZUT4 128 aa4.24□□□□□ -1.73
LRRC28-203ENST00000447360 COMMD7Q86VX2 200 aa4.24□□□□□ -1.73
LRRC28-203ENST00000447360 ORMDL3Q8N138 153 aa4.24□□□□□ -1.73
LRRC28-203ENST00000447360 PRELID3AQ96N28 172 aa4.24□□□□□ -1.73
LRRC28-203ENST00000447360 CARHSP1Q9Y2V2 147 aaKnown RBP4.24□□□□□ -1.73
LRRC28-203ENST00000447360 TRAV13-1A0A0B4J241 112 aa4.23□□□□□ -1.73
LRRC28-203ENST00000447360 LOC389332A0A1B0GUA5 103 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms