RNA–Protein interactions for RNA: ENST00000446593.1

LINC01880-201, Transcript of long intergenic non-protein coding RNA 1880, humanhuman

TSL 4 BASIC

Gene LINC01880, Length 561 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01880-201ENST00000446593 COX11Q9Y6N1 276 aa3.84□□□□□ -1.79
LINC01880-201ENST00000446593 KIF25-AS1Q9Y6Z4 181 aa3.84□□□□□ -1.79
LINC01880-201ENST00000446593 TRAV8-3A0A0A6YYJ7 113 aa3.83□□□□□ -1.8
LINC01880-201ENST00000446593 M0QY20 66 aa3.83□□□□□ -1.8
LINC01880-201ENST00000446593 NPYP01303 97 aa3.83□□□□□ -1.8
LINC01880-201ENST00000446593 SMIM6P0DI80 62 aa3.83□□□□□ -1.8
LINC01880-201ENST00000446593 ZNF25P17030 456 aaPredicted RBP3.83□□□□□ -1.8
LINC01880-201ENST00000446593 KRTDAPP60985 99 aa3.83□□□□□ -1.8
LINC01880-201ENST00000446593 HERVK_113P61574 105 aa3.83□□□□□ -1.8
LINC01880-201ENST00000446593 PET117Q6UWS5 81 aa3.83□□□□□ -1.8
LINC01880-201ENST00000446593 Q6ZRU5 148 aa3.83□□□□□ -1.8
LINC01880-201ENST00000446593 RNF185Q96GF1 192 aa3.83□□□□□ -1.8
LINC01880-201ENST00000446593 GTSF1LQ9H1H1 148 aa3.83□□□□□ -1.8
LINC01880-201ENST00000446593 VCX2Q9H322 139 aa3.83□□□□□ -1.8
LINC01880-201ENST00000446593 SPANXA1Q9NS26 97 aa3.83□□□□□ -1.8
LINC01880-201ENST00000446593 A0A087WX48 190 aa3.82□□□□□ -1.8
LINC01880-201ENST00000446593 IGHV3-73A0A0B4J1V6 119 aa3.82□□□□□ -1.8
LINC01880-201ENST00000446593 LECT2O14960 151 aa3.82□□□□□ -1.8
LINC01880-201ENST00000446593 CCL25O15444 150 aa3.82□□□□□ -1.8
LINC01880-201ENST00000446593 IGHV3-30P01768 117 aa3.82□□□□□ -1.8
LINC01880-201ENST00000446593 IGHV3-33P01772 117 aa3.82□□□□□ -1.8
LINC01880-201ENST00000446593 IGHV3-30-3P0DP02 117 aa3.82□□□□□ -1.8
LINC01880-201ENST00000446593 IGHV3-30-5P0DP03 117 aa3.82□□□□□ -1.8
LINC01880-201ENST00000446593 GATA1P15976 413 aaPredicted RBP3.82□□□□□ -1.8
LINC01880-201ENST00000446593 PLNP26678 52 aa3.82□□□□□ -1.8
LINC01880-201ENST00000446593 LINC00310P59036 64 aa3.82□□□□□ -1.8
LINC01880-201ENST00000446593 LINC01620Q4KN68 170 aa3.82□□□□□ -1.8
LINC01880-201ENST00000446593 PDZD11Q5EBL8 140 aa3.82□□□□□ -1.8
LINC01880-201ENST00000446593 ERASQ7Z444 233 aa3.82□□□□□ -1.8
LINC01880-201ENST00000446593 HIST3H2BBQ8N257 126 aa3.82□□□□□ -1.8
LINC01880-201ENST00000446593 OR10D4PQ8NGN7 298 aa3.82□□□□□ -1.8
LINC01880-201ENST00000446593 ATP6V0E2Q8NHE4 81 aa3.82□□□□□ -1.8
LINC01880-201ENST00000446593 SVIPQ8NHG7 77 aa3.82□□□□□ -1.8
LINC01880-201ENST00000446593 ZNF479Q96JC4 524 aa3.82□□□□□ -1.8
LINC01880-201ENST00000446593 TMEM243Q9BU79 118 aa3.82□□□□□ -1.8
LINC01880-201ENST00000446593 TRAV26-2A0A0B4J265 109 aa3.81□□□□□ -1.8
LINC01880-201ENST00000446593 TMEM262E9PQX1 116 aa3.81□□□□□ -1.8
LINC01880-201ENST00000446593 TSTD3H0UI37 97 aa3.81□□□□□ -1.8
LINC01880-201ENST00000446593 SMKR1H3BMG3 65 aa3.81□□□□□ -1.8
LINC01880-201ENST00000446593 GAS8-AS1O95177 125 aa3.81□□□□□ -1.8
LINC01880-201ENST00000446593 MT1HL1P0DM35 61 aa3.81□□□□□ -1.8
LINC01880-201ENST00000446593 C2orf66Q6UXQ4 117 aa3.81□□□□□ -1.8
LINC01880-201ENST00000446593 TEX43Q6ZNM6 134 aa3.81□□□□□ -1.8
LINC01880-201ENST00000446593 SLC25A29Q8N8R3 303 aa3.81□□□□□ -1.8
LINC01880-201ENST00000446593 NRACQ8N912 160 aa3.81□□□□□ -1.8
LINC01880-201ENST00000446593 OR5A1Q8NGJ0 315 aa3.81□□□□□ -1.8
LINC01880-201ENST00000446593 BAALCQ8WXS3 180 aa3.81□□□□□ -1.8
LINC01880-201ENST00000446593 IFI27L1Q96BM0 104 aa3.81□□□□□ -1.8
LINC01880-201ENST00000446593 RMI2Q96E14 147 aa3.81□□□□□ -1.8
LINC01880-201ENST00000446593 TIMM17AQ99595 171 aa3.81□□□□□ -1.8
LINC01880-201ENST00000446593 CHCHD5Q9BSY4 110 aa3.81□□□□□ -1.8
LINC01880-201ENST00000446593 GAGE12JA6NER3 117 aa3.8□□□□□ -1.8
LINC01880-201ENST00000446593 H3BRM9 83 aa3.8□□□□□ -1.8
LINC01880-201ENST00000446593 POLR2KP53803 58 aaKnown RBP3.8□□□□□ -1.8
LINC01880-201ENST00000446593 GAGE1Q13065 139 aa3.8□□□□□ -1.8
LINC01880-201ENST00000446593 GAGE4Q13068 117 aa3.8□□□□□ -1.8
LINC01880-201ENST00000446593 GAGE5Q13069 117 aa3.8□□□□□ -1.8
LINC01880-201ENST00000446593 WFDC2Q14508 124 aa3.8□□□□□ -1.8
LINC01880-201ENST00000446593 GAGE13Q4V321 117 aa3.8□□□□□ -1.8
LINC01880-201ENST00000446593 LELP1Q5T871 98 aa3.8□□□□□ -1.8
LINC01880-201ENST00000446593 TOMM6Q96B49 74 aa3.8□□□□□ -1.8
LINC01880-201ENST00000446593 HIST1H2BLQ99880 126 aa3.8□□□□□ -1.8
LINC01880-201ENST00000446593 CHCHD7Q9BUK0 85 aa3.8□□□□□ -1.8
LINC01880-201ENST00000446593 VAMP8Q9BV40 100 aa3.8□□□□□ -1.8
LINC01880-201ENST00000446593 TIMM21Q9BVV7 248 aa3.8□□□□□ -1.8
LINC01880-201ENST00000446593 GEMIN7Q9H840 131 aaKnown RBP3.8□□□□□ -1.8
LINC01880-201ENST00000446593 PYGO1Q9Y3Y4 419 aa3.8□□□□□ -1.8
LINC01880-201ENST00000446593 TRBV6-8A0A0A6YYG3 113 aa3.79□□□□□ -1.8
LINC01880-201ENST00000446593 LOC100131303A0A0U1RQF7 123 aa3.79□□□□□ -1.8
LINC01880-201ENST00000446593 LINC01546A6NGU7 62 aa3.79□□□□□ -1.8
LINC01880-201ENST00000446593 H0Y8G0 127 aa3.79□□□□□ -1.8
LINC01880-201ENST00000446593 DPM2O94777 84 aa3.79□□□□□ -1.8
LINC01880-201ENST00000446593 CRPP02741 224 aa3.79□□□□□ -1.8
LINC01880-201ENST00000446593 HNRNPA3P51991 378 aaKnown RBP3.79□□□□□ -1.8
LINC01880-201ENST00000446593 UBE2D3P61077 147 aa3.79□□□□□ -1.8
LINC01880-201ENST00000446593 UBE2D2P62837 147 aa3.79□□□□□ -1.8
LINC01880-201ENST00000446593 JOSD1Q15040 202 aaPredicted RBP3.79□□□□□ -1.8
LINC01880-201ENST00000446593 PMVKQ15126 192 aa3.79□□□□□ -1.8
LINC01880-201ENST00000446593 SS18Q15532 418 aa3.79□□□□□ -1.8
LINC01880-201ENST00000446593 SFTA2Q6UW10 78 aa3.79□□□□□ -1.8
LINC01880-201ENST00000446593 FAM19A2Q8N3H0 131 aa3.79□□□□□ -1.8
LINC01880-201ENST00000446593 C20orf203Q8NBC4 194 aa3.79□□□□□ -1.8
LINC01880-201ENST00000446593 NEXN-AS1Q8NBZ9 246 aa3.79□□□□□ -1.8
LINC01880-201ENST00000446593 COPS9Q8WXC6 57 aa3.79□□□□□ -1.8
LINC01880-201ENST00000446593 RPL39LQ96EH5 51 aaKnown RBP3.79□□□□□ -1.8
LINC01880-201ENST00000446593 Q9UF83 564 aa3.79□□□□□ -1.8
LINC01880-201ENST00000446593 CSDC2Q9Y534 153 aaKnown RBP3.79□□□□□ -1.8
LINC01880-201ENST00000446593 FAT3Q8TDW7 4589 aa3.78□□□□□ -1.8
LINC01880-201ENST00000446593 LRP2P98164 4655 aa3.78□□□□□ -1.8
LINC01880-201ENST00000446593 TRAV12-1A0A0B4J245 112 aa3.78□□□□□ -1.8
LINC01880-201ENST00000446593 SYS1-DBNDD2H3BUS1 97 aa3.78□□□□□ -1.8
LINC01880-201ENST00000446593 C14orf177Q52M58 125 aa3.78□□□□□ -1.8
LINC01880-201ENST00000446593 PMCHL2Q9BQD1 86 aa3.78□□□□□ -1.8
LINC01880-201ENST00000446593 CHTOPQ9Y3Y2 248 aaKnown RBP3.78□□□□□ -1.8
LINC01880-201ENST00000446593 DNAH8Q96JB1 4490 aa3.78□□□□□ -1.81
LINC01880-201ENST00000446593 IGKV2D-24A0A075B6R9 120 aa3.77□□□□□ -1.81
LINC01880-201ENST00000446593 IFITM10A6NMD0 228 aa3.77□□□□□ -1.81
LINC01880-201ENST00000446593 LINC00587B1AMM8 73 aa3.77□□□□□ -1.81
LINC01880-201ENST00000446593 F8VRH5 84 aa3.77□□□□□ -1.81
LINC01880-201ENST00000446593 APOMO95445 188 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 101.3 ms