RNA–Protein interactions for RNA: ENST00000445654.2

SHANK2-209, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 3

Gene SHANK2, Length 522 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-209ENST00000445654 TLX1NBP0CAT3 122 aa8.22□□□□□ -1.09
SHANK2-209ENST00000445654 FOXA3P55318 350 aaPredicted RBP8.22□□□□□ -1.09
SHANK2-209ENST00000445654 TYMSOSQ8TAI1 123 aa8.22□□□□□ -1.09
SHANK2-209ENST00000445654 TMEM218A2RU14 115 aa8.21□□□□□ -1.1
SHANK2-209ENST00000445654 LINC00862A6NCI5 91 aa8.21□□□□□ -1.1
SHANK2-209ENST00000445654 M0QXV9 152 aa8.21□□□□□ -1.1
SHANK2-209ENST00000445654 CRYGAP11844 174 aa8.21□□□□□ -1.1
SHANK2-209ENST00000445654 PNRC1Q12796 327 aaPredicted RBP8.21□□□□□ -1.1
SHANK2-209ENST00000445654 KRTAP11-1Q8IUC1 163 aa8.21□□□□□ -1.1
SHANK2-209ENST00000445654 RPL39LQ96EH5 51 aaKnown RBP8.21□□□□□ -1.1
SHANK2-209ENST00000445654 CNFNQ9BYD5 112 aa8.21□□□□□ -1.1
SHANK2-209ENST00000445654 FSIP2Q5CZC0 6907 aa8.21□□□□□ -1.1
SHANK2-209ENST00000445654 TRBV6-5A0A0K0K1A5 114 aa8.2□□□□□ -1.1
SHANK2-209ENST00000445654 A0A1B0GUT8 65 aa8.2□□□□□ -1.1
SHANK2-209ENST00000445654 NDUFA1O15239 70 aa8.2□□□□□ -1.1
SHANK2-209ENST00000445654 NAT8BQ9UHF3 227 aa8.2□□□□□ -1.1
SHANK2-209ENST00000445654 FAM168BA1KXE4 195 aa8.19□□□□□ -1.1
SHANK2-209ENST00000445654 C7orf77A4D0Y5 90 aa8.19□□□□□ -1.1
SHANK2-209ENST00000445654 PPP1R2P9O14990 202 aa8.19□□□□□ -1.1
SHANK2-209ENST00000445654 NUPR1O60356 82 aa8.19□□□□□ -1.1
SHANK2-209ENST00000445654 MT-ND4LP03901 98 aa8.19□□□□□ -1.1
SHANK2-209ENST00000445654 CTAG1AP78358 180 aa8.19□□□□□ -1.1
SHANK2-209ENST00000445654 RIGQ13278 110 aa8.19□□□□□ -1.1
SHANK2-209ENST00000445654 SMIM27A0A1W2PRY6 76 aa8.18□□□□□ -1.1
SHANK2-209ENST00000445654 C5orf38Q86SI9 138 aa8.18□□□□□ -1.1
SHANK2-209ENST00000445654 CSDC2Q9Y534 153 aaKnown RBP8.18□□□□□ -1.1
SHANK2-209ENST00000445654 TSHBP01222 138 aa8.17□□□□□ -1.1
SHANK2-209ENST00000445654 ADCYAP1P18509 176 aa8.17□□□□□ -1.1
SHANK2-209ENST00000445654 ANAPC16Q96DE5 110 aa8.17□□□□□ -1.1
SHANK2-209ENST00000445654 SEC11CQ9BY50 192 aa8.17□□□□□ -1.1
SHANK2-209ENST00000445654 ST20Q9HBF5 79 aa8.17□□□□□ -1.1
SHANK2-209ENST00000445654 IGLV7-46A0A075B6I9 117 aa8.16□□□□□ -1.1
SHANK2-209ENST00000445654 TMEM242Q9NWH2 141 aa8.16□□□□□ -1.1
SHANK2-209ENST00000445654 TRAV13-1A0A0B4J241 112 aa8.15□□□□□ -1.1
SHANK2-209ENST00000445654 GAGE2EQ4V326 116 aa8.15□□□□□ -1.1
SHANK2-209ENST00000445654 ORAOV1Q8WV07 137 aa8.15□□□□□ -1.1
SHANK2-209ENST00000445654 TMEM191AQ9H0A3 160 aa8.15□□□□□ -1.1
SHANK2-209ENST00000445654 GAGE2DQ9UEU5 116 aa8.15□□□□□ -1.1
SHANK2-209ENST00000445654 RPL28P46779 137 aaKnown RBP8.14□□□□□ -1.11
SHANK2-209ENST00000445654 MRPL54Q6P161 138 aaKnown RBP8.14□□□□□ -1.11
SHANK2-209ENST00000445654 LINC00173Q6ZV60 143 aa8.14□□□□□ -1.11
SHANK2-209ENST00000445654 A0A087X002 238 aa8.13□□□□□ -1.11
SHANK2-209ENST00000445654 TRBV27A0A0K0K1C4 114 aa8.13□□□□□ -1.11
SHANK2-209ENST00000445654 A0A1B0GW15 77 aa8.13□□□□□ -1.11
SHANK2-209ENST00000445654 TMEM18Q96B42 140 aa8.13□□□□□ -1.11
SHANK2-209ENST00000445654 RETNLBQ9BQ08 111 aa8.13□□□□□ -1.11
SHANK2-209ENST00000445654 S100A8P05109 93 aa8.12□□□□□ -1.11
SHANK2-209ENST00000445654 FCER1GP30273 86 aa8.12□□□□□ -1.11
SHANK2-209ENST00000445654 LBHQ53QV2 105 aaPredicted RBP8.12□□□□□ -1.11
SHANK2-209ENST00000445654 AMN1Q8IY45 258 aa8.12□□□□□ -1.11
SHANK2-209ENST00000445654 CTDSP1Q9GZU7 261 aa8.12□□□□□ -1.11
SHANK2-209ENST00000445654 RAB4AP20338 218 aa8.11□□□□□ -1.11
SHANK2-209ENST00000445654 POLR2KP53803 58 aaKnown RBP8.11□□□□□ -1.11
SHANK2-209ENST00000445654 HBBP68871 147 aa8.11□□□□□ -1.11
SHANK2-209ENST00000445654 NDUFA5Q16718 116 aa8.11□□□□□ -1.11
SHANK2-209ENST00000445654 C10orf91Q5T1B1 145 aa8.11□□□□□ -1.11
SHANK2-209ENST00000445654 KRTAP7-1Q8IUC3 87 aa8.11□□□□□ -1.11
SHANK2-209ENST00000445654 LINC00304Q8N9R0 145 aa8.11□□□□□ -1.11
SHANK2-209ENST00000445654 C6orf48Q9UBA6 75 aa8.11□□□□□ -1.11
SHANK2-209ENST00000445654 TRBV30A0A0K0K1B3 111 aa8.1□□□□□ -1.11
SHANK2-209ENST00000445654 NDUFC2-KCTD14E9PQ53 114 aa8.1□□□□□ -1.11
SHANK2-209ENST00000445654 APOC3P02656 99 aa8.1□□□□□ -1.11
SHANK2-209ENST00000445654 UNQ6190/PRO20217Q6UXQ8 127 aa8.1□□□□□ -1.11
SHANK2-209ENST00000445654 TIMM21Q9BVV7 248 aa8.1□□□□□ -1.11
SHANK2-209ENST00000445654 RPS10P5Q9NQ39 176 aa8.1□□□□□ -1.11
SHANK2-209ENST00000445654 UBE2D4Q9Y2X8 147 aa8.1□□□□□ -1.11
SHANK2-209ENST00000445654 VCYO14598 125 aa8.09□□□□□ -1.11
SHANK2-209ENST00000445654 S100PP25815 95 aa8.09□□□□□ -1.11
SHANK2-209ENST00000445654 MRPL51Q4U2R6 128 aaKnown RBP8.09□□□□□ -1.11
SHANK2-209ENST00000445654 C10orf25Q5T742 122 aa8.09□□□□□ -1.11
SHANK2-209ENST00000445654 FAM104BQ5XKR9 115 aa8.09□□□□□ -1.11
SHANK2-209ENST00000445654 ATP5L2Q7Z4Y8 100 aa8.09□□□□□ -1.11
SHANK2-209ENST00000445654 A0A1B0GXF2 115 aa8.08□□□□□ -1.12
SHANK2-209ENST00000445654 SMKR1H3BMG3 65 aa8.08□□□□□ -1.12
SHANK2-209ENST00000445654 PPP1R17O96001 155 aa8.08□□□□□ -1.12
SHANK2-209ENST00000445654 RHEBQ15382 184 aa8.08□□□□□ -1.12
SHANK2-209ENST00000445654 FAM229BQ4G0N7 80 aa8.08□□□□□ -1.12
SHANK2-209ENST00000445654 RNASE13Q5GAN3 156 aaKnown RBP8.08□□□□□ -1.12
SHANK2-209ENST00000445654 SLC7A5P1Q8MH63 180 aa8.08□□□□□ -1.12
SHANK2-209ENST00000445654 PACRGQ96M98 296 aaPredicted RBP8.08□□□□□ -1.12
SHANK2-209ENST00000445654 KIR2DL4Q99706 377 aa8.08□□□□□ -1.12
SHANK2-209ENST00000445654 IGHV3OR16-9A0A0B4J2B5 98 aa8.07□□□□□ -1.12
SHANK2-209ENST00000445654 CKS2P33552 79 aa8.07□□□□□ -1.12
SHANK2-209ENST00000445654 SVBPQ8N300 66 aa8.07□□□□□ -1.12
SHANK2-209ENST00000445654 PPDPFQ9H3Y8 114 aa8.07□□□□□ -1.12
SHANK2-209ENST00000445654 BCE1O60756 84 aa8.06□□□□□ -1.12
SHANK2-209ENST00000445654 SNAPINO95295 136 aa8.06□□□□□ -1.12
SHANK2-209ENST00000445654 Q6ZUT4 128 aa8.06□□□□□ -1.12
SHANK2-209ENST00000445654 LINC00337Q8N6G1 96 aa8.06□□□□□ -1.12
SHANK2-209ENST00000445654 TGIF2-C20orf24A0A0A6YYL0 155 aa8.05□□□□□ -1.12
SHANK2-209ENST00000445654 TCAPO15273 167 aa8.05□□□□□ -1.12
SHANK2-209ENST00000445654 ASB16-AS1Q495Z4 193 aa8.05□□□□□ -1.12
SHANK2-209ENST00000445654 C9orf129Q5T035 196 aaKnown RBP8.05□□□□□ -1.12
SHANK2-209ENST00000445654 TRAV9-1A0A075B6T8 112 aa8.04□□□□□ -1.12
SHANK2-209ENST00000445654 IGKV2D-26A0A0A0MRZ7 120 aa8.04□□□□□ -1.12
SHANK2-209ENST00000445654 SEC61BP60468 96 aaKnown RBP8.04□□□□□ -1.12
SHANK2-209ENST00000445654 TMEM136Q6ZRR5 245 aa8.04□□□□□ -1.12
SHANK2-209ENST00000445654 FP248Q71RG6 208 aaPredicted RBP8.04□□□□□ -1.12
SHANK2-209ENST00000445654 TP73-AS1Q9UF72 201 aa8.04□□□□□ -1.12
SHANK2-209ENST00000445654 C22orf24Q9Y442 160 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 98.1 ms