RNA–Protein interactions for RNA: ENST00000445181.5

C9orf3-207, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 873 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-207ENST00000445181 YPEL4Q96NS1 127 aa15.47■□□□□ 0.07
C9orf3-207ENST00000445181 VCX2Q9H322 139 aa15.47■□□□□ 0.07
C9orf3-207ENST00000445181 ZNF561-AS1K7EIQ3 104 aa15.46■□□□□ 0.07
C9orf3-207ENST00000445181 IGHV3-64A0A075B6Q5 118 aa15.45■□□□□ 0.06
C9orf3-207ENST00000445181 IGIPA6NJ69 53 aa15.45■□□□□ 0.06
C9orf3-207ENST00000445181 FAM229AH3BQW9 127 aa15.45■□□□□ 0.06
C9orf3-207ENST00000445181 NPSP0C0P6 89 aa15.45■□□□□ 0.06
C9orf3-207ENST00000445181 LINC01546A6NGU7 62 aa15.44■□□□□ 0.06
C9orf3-207ENST00000445181 APOMO95445 188 aa15.44■□□□□ 0.06
C9orf3-207ENST00000445181 PAPPA-AS1Q5QFB9 102 aa15.44■□□□□ 0.06
C9orf3-207ENST00000445181 LINC00526Q96FQ7 95 aa15.44■□□□□ 0.06
C9orf3-207ENST00000445181 SCGB3A1Q96QR1 104 aa15.44■□□□□ 0.06
C9orf3-207ENST00000445181 FAT1Q14517 4588 aa15.43■□□□□ 0.06
C9orf3-207ENST00000445181 ZC2HC1BQ5TFG8 222 aa15.42■□□□□ 0.06
C9orf3-207ENST00000445181 C18orf32Q8TCD1 76 aa15.42■□□□□ 0.06
C9orf3-207ENST00000445181 TIMM17AQ99595 171 aa15.42■□□□□ 0.06
C9orf3-207ENST00000445181 LINC01549A6NIU2 74 aa15.41■□□□□ 0.06
C9orf3-207ENST00000445181 SDIM1Q6ZPB5 146 aa15.41■□□□□ 0.06
C9orf3-207ENST00000445181 SCXQ7RTU7 201 aa15.41■□□□□ 0.06
C9orf3-207ENST00000445181 ERASQ7Z444 233 aa15.41■□□□□ 0.06
C9orf3-207ENST00000445181 AMELXQ99217 191 aa15.41■□□□□ 0.06
C9orf3-207ENST00000445181 CHAC1Q9BUX1 264 aa15.41■□□□□ 0.06
C9orf3-207ENST00000445181 IGHV3OR16-9A0A0B4J2B5 98 aa15.4■□□□□ 0.06
C9orf3-207ENST00000445181 UBE2D1P51668 147 aa15.4■□□□□ 0.06
C9orf3-207ENST00000445181 LINC00242Q5T6M2 205 aa15.4■□□□□ 0.06
C9orf3-207ENST00000445181 LINC00173Q6ZV60 143 aa15.4■□□□□ 0.06
C9orf3-207ENST00000445181 IGLV4-69A0A075B6H9 119 aa15.38■□□□□ 0.05
C9orf3-207ENST00000445181 LINC00614P0C842 121 aa15.38■□□□□ 0.05
C9orf3-207ENST00000445181 CARD19Q96LW7 228 aa15.38■□□□□ 0.05
C9orf3-207ENST00000445181 RAB5BP61020 215 aa15.37■□□□□ 0.05
C9orf3-207ENST00000445181 SPAG11BQ08648 103 aa15.37■□□□□ 0.05
C9orf3-207ENST00000445181 SYCNQ0VAF6 134 aa15.37■□□□□ 0.05
C9orf3-207ENST00000445181 CIRBP-AS1Q8TBR5 109 aa15.37■□□□□ 0.05
C9orf3-207ENST00000445181 ORAOV1Q8WV07 137 aa15.37■□□□□ 0.05
C9orf3-207ENST00000445181 VPS13BQ7Z7G8 4022 aa15.36■□□□□ 0.05
C9orf3-207ENST00000445181 COX6A2Q02221 97 aa15.36■□□□□ 0.05
C9orf3-207ENST00000445181 OR10D4PQ8NGN7 298 aa15.36■□□□□ 0.05
C9orf3-207ENST00000445181 DPH3Q96FX2 82 aa15.36■□□□□ 0.05
C9orf3-207ENST00000445181 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP15.36■□□□□ 0.05
C9orf3-207ENST00000445181 CAMK2N2Q96S95 79 aa15.35■□□□□ 0.05
C9orf3-207ENST00000445181 SRRM2Q9UQ35 2752 aaKnown RBP15.35■□□□□ 0.05
C9orf3-207ENST00000445181 A0A087WZ39 114 aa15.34■□□□□ 0.05
C9orf3-207ENST00000445181 URB1-AS1Q96HZ7 61 aa15.34■□□□□ 0.05
C9orf3-207ENST00000445181 SEC11AP67812 179 aa15.33■□□□□ 0.04
C9orf3-207ENST00000445181 PANO1I0J062 215 aa15.32■□□□□ 0.04
C9orf3-207ENST00000445181 C2orf48Q96LS8 159 aa15.32■□□□□ 0.04
C9orf3-207ENST00000445181 PKIGQ9Y2B9 76 aa15.32■□□□□ 0.04
C9orf3-207ENST00000445181 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP15.31■□□□□ 0.04
C9orf3-207ENST00000445181 HBDP02042 147 aa15.31■□□□□ 0.04
C9orf3-207ENST00000445181 CHTF8P0CG12 524 aa15.31■□□□□ 0.04
C9orf3-207ENST00000445181 PMCHL1Q16048 86 aa15.31■□□□□ 0.04
C9orf3-207ENST00000445181 Q6ZRU5 148 aa15.31■□□□□ 0.04
C9orf3-207ENST00000445181 GEMIN7Q9H840 131 aaKnown RBP15.31■□□□□ 0.04
C9orf3-207ENST00000445181 TRGC2P03986 189 aa15.3■□□□□ 0.04
C9orf3-207ENST00000445181 HERVK_113P63121 156 aa15.3■□□□□ 0.04
C9orf3-207ENST00000445181 FAM19A3Q7Z5A8 133 aa15.3■□□□□ 0.04
C9orf3-207ENST00000445181 LINC00528Q8N1L1 170 aa15.3■□□□□ 0.04
C9orf3-207ENST00000445181 IGKV2-24A0A0C4DH68 120 aa15.29■□□□□ 0.04
C9orf3-207ENST00000445181 A0A096LNJ9 63 aa15.28■□□□□ 0.04
C9orf3-207ENST00000445181 A0A0J9YXV3 536 aa15.28■□□□□ 0.04
C9orf3-207ENST00000445181 PLA2G1BP04054 148 aaKnown RBP15.28■□□□□ 0.04
C9orf3-207ENST00000445181 CST9LQ9H4G1 147 aa15.28■□□□□ 0.04
C9orf3-207ENST00000445181 CIRBPQ14011 172 aaKnown RBP15.27■□□□□ 0.04
C9orf3-207ENST00000445181 PMVKQ15126 192 aa15.27■□□□□ 0.04
C9orf3-207ENST00000445181 LINC01561Q8N1V8 128 aa15.27■□□□□ 0.04
C9orf3-207ENST00000445181 SPACA4Q8TDM5 124 aa15.27■□□□□ 0.04
C9orf3-207ENST00000445181 NDUFA1O15239 70 aa15.26■□□□□ 0.03
C9orf3-207ENST00000445181 NDUFA6P56556 154 aa15.26■□□□□ 0.03
C9orf3-207ENST00000445181 MAJINQ3KP22 176 aa15.26■□□□□ 0.03
C9orf3-207ENST00000445181 BAGE3Q86Y29 109 aa15.26■□□□□ 0.03
C9orf3-207ENST00000445181 CHCHD1Q96BP2 118 aaKnown RBP15.26■□□□□ 0.03
C9orf3-207ENST00000445181 PACRGQ96M98 296 aaPredicted RBP15.26■□□□□ 0.03
C9orf3-207ENST00000445181 COLCA2A8K830 154 aa15.25■□□□□ 0.03
C9orf3-207ENST00000445181 F8WDY8 70 aa15.25■□□□□ 0.03
C9orf3-207ENST00000445181 CDKN2A-AS1Q9UH64 79 aa15.25■□□□□ 0.03
C9orf3-207ENST00000445181 A0A096LNI7 61 aa15.24■□□□□ 0.03
C9orf3-207ENST00000445181 LINC00469Q8N7U9 141 aa15.24■□□□□ 0.03
C9orf3-207ENST00000445181 LINC00474Q9P2X8 69 aa15.24■□□□□ 0.03
C9orf3-207ENST00000445181 FLG2Q5D862 2391 aaPredicted RBP15.23■□□□□ 0.03
C9orf3-207ENST00000445181 A0A087WYN8 130 aa15.23■□□□□ 0.03
C9orf3-207ENST00000445181 LOC107984640A0A0U1RRK4 108 aa15.23■□□□□ 0.03
C9orf3-207ENST00000445181 TINCRA0A1B0GVN0 87 aa15.23■□□□□ 0.03
C9orf3-207ENST00000445181 SCO1O75880 301 aa15.23■□□□□ 0.03
C9orf3-207ENST00000445181 PRSS2P07478 247 aa15.23■□□□□ 0.03
C9orf3-207ENST00000445181 PDZD11Q5EBL8 140 aa15.23■□□□□ 0.03
C9orf3-207ENST00000445181 TOMM7Q9P0U1 55 aa15.23■□□□□ 0.03
C9orf3-207ENST00000445181 ATP5LO75964 103 aa15.22■□□□□ 0.03
C9orf3-207ENST00000445181 GAGE2BQ13066 116 aa15.21■□□□□ 0.03
C9orf3-207ENST00000445181 KIAA0087Q14695 138 aa15.21■□□□□ 0.03
C9orf3-207ENST00000445181 RNF151Q2KHN1 245 aa15.21■□□□□ 0.03
C9orf3-207ENST00000445181 UNQ6190/PRO20217Q6UXQ8 127 aa15.21■□□□□ 0.03
C9orf3-207ENST00000445181 MRPL35Q9NZE8 188 aaKnown RBP15.21■□□□□ 0.03
C9orf3-207ENST00000445181 RPL18AQ02543 176 aaKnown RBP15.2■□□□□ 0.02
C9orf3-207ENST00000445181 HSBP1O75506 76 aa15.19■□□□□ 0.02
C9orf3-207ENST00000445181 C10orf25Q5T742 122 aa15.19■□□□□ 0.02
C9orf3-207ENST00000445181 STPG4Q8N801 248 aa15.19■□□□□ 0.02
C9orf3-207ENST00000445181 DMBT1Q9UGM3 2413 aaPredicted RBP15.18■□□□□ 0.02
C9orf3-207ENST00000445181 PTTG1IPP53801 180 aa15.18■□□□□ 0.02
C9orf3-207ENST00000445181 CKS1BP61024 79 aa15.18■□□□□ 0.02
C9orf3-207ENST00000445181 C6orf226Q5I0X4 101 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms