RNA–Protein interactions for RNA: ENST00000444896.1

HMGB3P6-201, Transcript of high mobility group box 3 pseudogene 6, humanhuman

BASIC

Gene HMGB3P6, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P6-201ENST00000444896 LINC01619G3V211 115 aa2.34□□□□□ -2.03
HMGB3P6-201ENST00000444896 GNRH2O43555 120 aa2.34□□□□□ -2.03
HMGB3P6-201ENST00000444896 SMIM13P0DJ93 91 aa2.34□□□□□ -2.03
HMGB3P6-201ENST00000444896 RNASE3P12724 160 aaKnown RBP2.34□□□□□ -2.03
HMGB3P6-201ENST00000444896 TCTAP57738 103 aa2.34□□□□□ -2.03
HMGB3P6-201ENST00000444896 DEFB1P60022 68 aa2.34□□□□□ -2.03
HMGB3P6-201ENST00000444896 RHOHQ15669 191 aa2.34□□□□□ -2.03
HMGB3P6-201ENST00000444896 ZNF56Q15929 161 aa2.34□□□□□ -2.03
HMGB3P6-201ENST00000444896 TAL2Q16559 108 aa2.34□□□□□ -2.03
HMGB3P6-201ENST00000444896 DYNLRB2Q8TF09 96 aa2.34□□□□□ -2.03
HMGB3P6-201ENST00000444896 RPL39LQ96EH5 51 aaKnown RBP2.34□□□□□ -2.03
HMGB3P6-201ENST00000444896 TMEM141Q96I45 108 aa2.34□□□□□ -2.03
HMGB3P6-201ENST00000444896 MRPL35Q9NZE8 188 aaKnown RBP2.34□□□□□ -2.03
HMGB3P6-201ENST00000444896 TP73-AS1Q9UF72 201 aa2.34□□□□□ -2.03
HMGB3P6-201ENST00000444896 CFAP46Q8IYW2 2715 aa2.34□□□□□ -2.03
HMGB3P6-201ENST00000444896 NBPF19A0A087WUL8 3843 aa2.34□□□□□ -2.04
HMGB3P6-201ENST00000444896 NAV2Q8IVL1 2488 aa2.33□□□□□ -2.04
HMGB3P6-201ENST00000444896 LRRK2Q5S007 2527 aa2.33□□□□□ -2.04
HMGB3P6-201ENST00000444896 ZNF462Q96JM2 2506 aa2.33□□□□□ -2.04
HMGB3P6-201ENST00000444896 COL12A1Q99715 3063 aa2.33□□□□□ -2.04
HMGB3P6-201ENST00000444896 TRBV25-1A0A075B6N4 114 aa2.33□□□□□ -2.04
HMGB3P6-201ENST00000444896 TRBV6-5A0A0K0K1A5 114 aa2.33□□□□□ -2.04
HMGB3P6-201ENST00000444896 SDHAF1A6NFY7 115 aa2.33□□□□□ -2.04
HMGB3P6-201ENST00000444896 CCL25O15444 150 aa2.33□□□□□ -2.04
HMGB3P6-201ENST00000444896 PRB1P04280 392 aa2.33□□□□□ -2.04
HMGB3P6-201ENST00000444896 FABP2P12104 132 aa2.33□□□□□ -2.04
HMGB3P6-201ENST00000444896 SPINK13Q1W4C9 94 aa2.33□□□□□ -2.04
HMGB3P6-201ENST00000444896 FAM74A4Q5TZK3 123 aa2.33□□□□□ -2.04
HMGB3P6-201ENST00000444896 AMMECR1LQ6DCA0 310 aa2.33□□□□□ -2.04
HMGB3P6-201ENST00000444896 C10orf99Q6UWK7 81 aa2.33□□□□□ -2.04
HMGB3P6-201ENST00000444896 Q6ZQT7 251 aa2.33□□□□□ -2.04
HMGB3P6-201ENST00000444896 Q8N2B8 174 aa2.33□□□□□ -2.04
HMGB3P6-201ENST00000444896 OR5A1Q8NGJ0 315 aa2.33□□□□□ -2.04
HMGB3P6-201ENST00000444896 C4orf3Q8WVX3 66 aa2.33□□□□□ -2.04
HMGB3P6-201ENST00000444896 BAALCQ8WXS3 180 aa2.33□□□□□ -2.04
HMGB3P6-201ENST00000444896 TP53TG1Q9Y2A0 90 aa2.33□□□□□ -2.04
HMGB3P6-201ENST00000444896 CBY1Q9Y3M2 126 aa2.33□□□□□ -2.04
HMGB3P6-201ENST00000444896 FLNCQ14315 2725 aa2.33□□□□□ -2.04
HMGB3P6-201ENST00000444896 USP9YO00507 2555 aaPredicted RBP2.32□□□□□ -2.04
HMGB3P6-201ENST00000444896 USP24Q9UPU5 2620 aa2.32□□□□□ -2.04
HMGB3P6-201ENST00000444896 TRAV12-2A0A075B6T6 113 aa2.32□□□□□ -2.04
HMGB3P6-201ENST00000444896 IGKV2D-26A0A0A0MRZ7 120 aa2.32□□□□□ -2.04
HMGB3P6-201ENST00000444896 TRAV8-6A0A0B4J262 113 aa2.32□□□□□ -2.04
HMGB3P6-201ENST00000444896 TRAV25A0A0B4J276 109 aa2.32□□□□□ -2.04
HMGB3P6-201ENST00000444896 TRBV27A0A0K0K1C4 114 aa2.32□□□□□ -2.04
HMGB3P6-201ENST00000444896 MYMXA0A1B0GTQ4 84 aa2.32□□□□□ -2.04
HMGB3P6-201ENST00000444896 A0A1W2PPM0 123 aa2.32□□□□□ -2.04
HMGB3P6-201ENST00000444896 ZNF815PA8K554 130 aa2.32□□□□□ -2.04
HMGB3P6-201ENST00000444896 A8MWV9 139 aa2.32□□□□□ -2.04
HMGB3P6-201ENST00000444896 H3BUT2 72 aa2.32□□□□□ -2.04
HMGB3P6-201ENST00000444896 I3L3M4 83 aa2.32□□□□□ -2.04
HMGB3P6-201ENST00000444896 K7EP13 123 aa2.32□□□□□ -2.04
HMGB3P6-201ENST00000444896 K7EP34 96 aa2.32□□□□□ -2.04
HMGB3P6-201ENST00000444896 K7ERU9 68 aa2.32□□□□□ -2.04
HMGB3P6-201ENST00000444896 POLR2KP53803 58 aaKnown RBP2.32□□□□□ -2.04
HMGB3P6-201ENST00000444896 DEFB131AP59861 70 aa2.32□□□□□ -2.04
HMGB3P6-201ENST00000444896 PMVKQ15126 192 aa2.32□□□□□ -2.04
HMGB3P6-201ENST00000444896 RBMY1FQ15415 496 aaKnown RBP2.32□□□□□ -2.04
HMGB3P6-201ENST00000444896 KPRPQ5T749 579 aaPredicted RBP2.32□□□□□ -2.04
HMGB3P6-201ENST00000444896 LYRM7Q5U5X0 104 aa2.32□□□□□ -2.04
HMGB3P6-201ENST00000444896 SCGB1D4Q6XE38 83 aa2.32□□□□□ -2.04
HMGB3P6-201ENST00000444896 NHP2Q9NX24 153 aaKnown RBP2.32□□□□□ -2.04
HMGB3P6-201ENST00000444896 HHLA3Q9XRX5 114 aa2.32□□□□□ -2.04
HMGB3P6-201ENST00000444896 SPCS1Q9Y6A9 102 aa2.32□□□□□ -2.04
HMGB3P6-201ENST00000444896 PTPN13Q12923 2485 aa2.32□□□□□ -2.04
HMGB3P6-201ENST00000444896 ZFYVE26Q68DK2 2539 aa2.32□□□□□ -2.04
HMGB3P6-201ENST00000444896 CR1P17927 2039 aa2.32□□□□□ -2.04
HMGB3P6-201ENST00000444896 ASH1LQ9NR48 2969 aaKnown RBP2.31□□□□□ -2.04
HMGB3P6-201ENST00000444896 C11orf86A6NJI1 115 aa2.31□□□□□ -2.04
HMGB3P6-201ENST00000444896 KNCNA6PVL3 124 aa2.31□□□□□ -2.04
HMGB3P6-201ENST00000444896 A8MTW9 85 aa2.31□□□□□ -2.04
HMGB3P6-201ENST00000444896 H3BMM0 161 aa2.31□□□□□ -2.04
HMGB3P6-201ENST00000444896 M0QY20 66 aa2.31□□□□□ -2.04
HMGB3P6-201ENST00000444896 M0R2P5 195 aa2.31□□□□□ -2.04
HMGB3P6-201ENST00000444896 LGALS3P17931 250 aaKnown RBP2.31□□□□□ -2.04
HMGB3P6-201ENST00000444896 FXYD2P54710 66 aa2.31□□□□□ -2.04
HMGB3P6-201ENST00000444896 CMC4P56277 68 aaPredicted RBP2.31□□□□□ -2.04
HMGB3P6-201ENST00000444896 SMAGPQ0VAQ4 97 aa2.31□□□□□ -2.04
HMGB3P6-201ENST00000444896 DEFB136Q30KP8 78 aa2.31□□□□□ -2.04
HMGB3P6-201ENST00000444896 AMTNQ6UX39 209 aa2.31□□□□□ -2.04
HMGB3P6-201ENST00000444896 MIR7-3HGQ8N6C7 128 aa2.31□□□□□ -2.04
HMGB3P6-201ENST00000444896 PTH2Q96A98 100 aa2.31□□□□□ -2.04
HMGB3P6-201ENST00000444896 RAB37Q96AX2 223 aa2.31□□□□□ -2.04
HMGB3P6-201ENST00000444896 DNAJC30Q96LL9 226 aa2.31□□□□□ -2.04
HMGB3P6-201ENST00000444896 LINC01587Q99440 93 aa2.31□□□□□ -2.04
HMGB3P6-201ENST00000444896 LINC00467Q9BRT7 94 aa2.31□□□□□ -2.04
HMGB3P6-201ENST00000444896 PRADC1Q9BSG0 188 aa2.31□□□□□ -2.04
HMGB3P6-201ENST00000444896 TMEM243Q9BU79 118 aa2.31□□□□□ -2.04
HMGB3P6-201ENST00000444896 CST9LQ9H4G1 147 aa2.31□□□□□ -2.04
HMGB3P6-201ENST00000444896 MUC4Q99102 2169 aa2.3□□□□□ -2.04
HMGB3P6-201ENST00000444896 DOPEY2Q9Y3R5 2298 aa2.3□□□□□ -2.04
HMGB3P6-201ENST00000444896 MYO9AB2RTY4 2548 aa2.3□□□□□ -2.04
HMGB3P6-201ENST00000444896 POLQO75417 2590 aa2.3□□□□□ -2.04
HMGB3P6-201ENST00000444896 UBR5O95071 2799 aaPredicted RBP2.3□□□□□ -2.04
HMGB3P6-201ENST00000444896 TRBV7-3A0A075B6L6 115 aa2.3□□□□□ -2.04
HMGB3P6-201ENST00000444896 IGHV3OR16-9A0A0B4J2B5 98 aa2.3□□□□□ -2.04
HMGB3P6-201ENST00000444896 IGIPA6NJ69 53 aa2.3□□□□□ -2.04
HMGB3P6-201ENST00000444896 TMEM238C9JI98 176 aa2.3□□□□□ -2.04
HMGB3P6-201ENST00000444896 NDUFC2-KCTD14E9PQ53 114 aa2.3□□□□□ -2.04
HMGB3P6-201ENST00000444896 CRYGDP07320 174 aa2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms