RNA–Protein interactions for RNA: ENST00000444532.2

CCDC188-202, Transcript of coiled-coil domain containing 188, humanhuman

TSL 3

Gene CCDC188, Length 628 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-202ENST00000444532 CYSLTR1Q9Y271 337 aa11.88□□□□□ -0.51
CCDC188-202ENST00000444532 PKIGQ9Y2B9 76 aa11.88□□□□□ -0.51
CCDC188-202ENST00000444532 IFITM10A6NMD0 228 aa11.87□□□□□ -0.51
CCDC188-202ENST00000444532 SYCNQ0VAF6 134 aa11.87□□□□□ -0.51
CCDC188-202ENST00000444532 C5orf38Q86SI9 138 aa11.87□□□□□ -0.51
CCDC188-202ENST00000444532 PRSS3P2Q8NHM4 247 aa11.87□□□□□ -0.51
CCDC188-202ENST00000444532 SPACA4Q8TDM5 124 aa11.87□□□□□ -0.51
CCDC188-202ENST00000444532 TMEM141Q96I45 108 aa11.87□□□□□ -0.51
CCDC188-202ENST00000444532 CARD19Q96LW7 228 aa11.87□□□□□ -0.51
CCDC188-202ENST00000444532 IGLV4-3A0A075B6K6 122 aa11.86□□□□□ -0.51
CCDC188-202ENST00000444532 CHTF8P0CG12 524 aa11.86□□□□□ -0.51
CCDC188-202ENST00000444532 G0S2P27469 103 aa11.86□□□□□ -0.51
CCDC188-202ENST00000444532 C2orf66Q6UXQ4 117 aa11.86□□□□□ -0.51
CCDC188-202ENST00000444532 IGLV4-69A0A075B6H9 119 aa11.85□□□□□ -0.51
CCDC188-202ENST00000444532 IGHV3OR16-9A0A0B4J2B5 98 aa11.85□□□□□ -0.51
CCDC188-202ENST00000444532 NPSP0C0P6 89 aa11.85□□□□□ -0.51
CCDC188-202ENST00000444532 CBLN2Q8IUK8 224 aa11.85□□□□□ -0.51
CCDC188-202ENST00000444532 MRPL18Q9H0U6 180 aaKnown RBP11.85□□□□□ -0.51
CCDC188-202ENST00000444532 A0A087WYN8 130 aa11.84□□□□□ -0.51
CCDC188-202ENST00000444532 KRTAP10-4P60372 401 aaPredicted RBP11.84□□□□□ -0.51
CCDC188-202ENST00000444532 FABP9Q0Z7S8 132 aa11.84□□□□□ -0.51
CCDC188-202ENST00000444532 SMCO4Q9NRQ5 59 aa11.84□□□□□ -0.51
CCDC188-202ENST00000444532 MT-ND6P03923 174 aa11.83□□□□□ -0.52
CCDC188-202ENST00000444532 TEX43Q6ZNM6 134 aa11.83□□□□□ -0.52
CCDC188-202ENST00000444532 OR10D4PQ8NGN7 298 aa11.83□□□□□ -0.52
CCDC188-202ENST00000444532 C2orf48Q96LS8 159 aa11.83□□□□□ -0.52
CCDC188-202ENST00000444532 PLAC8Q9NZF1 115 aa11.83□□□□□ -0.52
CCDC188-202ENST00000444532 LINC00474Q9P2X8 69 aa11.83□□□□□ -0.52
CCDC188-202ENST00000444532 RPL37AP61513 92 aaKnown RBP11.82□□□□□ -0.52
CCDC188-202ENST00000444532 MAJINQ3KP22 176 aa11.82□□□□□ -0.52
CCDC188-202ENST00000444532 Q6ZN92 141 aa11.82□□□□□ -0.52
CCDC188-202ENST00000444532 CAMK2N2Q96S95 79 aa11.82□□□□□ -0.52
CCDC188-202ENST00000444532 C2orf88Q9BSF0 95 aa11.82□□□□□ -0.52
CCDC188-202ENST00000444532 ALKBH7Q9BT30 221 aaPredicted RBP11.82□□□□□ -0.52
CCDC188-202ENST00000444532 TRAPPC1Q9Y5R8 145 aa11.82□□□□□ -0.52
CCDC188-202ENST00000444532 IGKV2-24A0A0C4DH68 120 aa11.81□□□□□ -0.52
CCDC188-202ENST00000444532 IGIPA6NJ69 53 aa11.81□□□□□ -0.52
CCDC188-202ENST00000444532 VCX2Q9H322 139 aa11.81□□□□□ -0.52
CCDC188-202ENST00000444532 A0A096LNI7 61 aa11.8□□□□□ -0.52
CCDC188-202ENST00000444532 F8WDY8 70 aa11.8□□□□□ -0.52
CCDC188-202ENST00000444532 SPAG11BQ08648 103 aa11.8□□□□□ -0.52
CCDC188-202ENST00000444532 LINC00242Q5T6M2 205 aa11.8□□□□□ -0.52
CCDC188-202ENST00000444532 Q6ZRU5 148 aa11.8□□□□□ -0.52
CCDC188-202ENST00000444532 AMELXQ99217 191 aa11.8□□□□□ -0.52
CCDC188-202ENST00000444532 UBE2D1P51668 147 aa11.79□□□□□ -0.52
CCDC188-202ENST00000444532 PAPPA-AS1Q5QFB9 102 aa11.79□□□□□ -0.52
CCDC188-202ENST00000444532 ORAOV1Q8WV07 137 aa11.79□□□□□ -0.52
CCDC188-202ENST00000444532 TOMM6Q96B49 74 aa11.79□□□□□ -0.52
CCDC188-202ENST00000444532 FLG2Q5D862 2391 aaPredicted RBP11.79□□□□□ -0.52
CCDC188-202ENST00000444532 A0A087WZ39 114 aa11.78□□□□□ -0.52
CCDC188-202ENST00000444532 LOC107984640A0A0U1RRK4 108 aa11.78□□□□□ -0.52
CCDC188-202ENST00000444532 LINC01546A6NGU7 62 aa11.78□□□□□ -0.52
CCDC188-202ENST00000444532 LINC00173Q6ZV60 143 aa11.78□□□□□ -0.52
CCDC188-202ENST00000444532 STPG4Q8N801 248 aa11.78□□□□□ -0.52
CCDC188-202ENST00000444532 LINC01549A6NIU2 74 aa11.77□□□□□ -0.53
CCDC188-202ENST00000444532 RNF151Q2KHN1 245 aa11.77□□□□□ -0.53
CCDC188-202ENST00000444532 TIMM17AQ99595 171 aa11.77□□□□□ -0.53
CCDC188-202ENST00000444532 ZC2HC1BQ5TFG8 222 aa11.76□□□□□ -0.53
CCDC188-202ENST00000444532 ERASQ7Z444 233 aa11.76□□□□□ -0.53
CCDC188-202ENST00000444532 LINC01561Q8N1V8 128 aa11.76□□□□□ -0.53
CCDC188-202ENST00000444532 SCO1O75880 301 aa11.75□□□□□ -0.53
CCDC188-202ENST00000444532 PTTG1IPP53801 180 aa11.75□□□□□ -0.53
CCDC188-202ENST00000444532 FAM19A3Q7Z5A8 133 aa11.75□□□□□ -0.53
CCDC188-202ENST00000444532 C7orf33Q8WU49 177 aa11.75□□□□□ -0.53
CCDC188-202ENST00000444532 COLCA2A8K830 154 aa11.74□□□□□ -0.53
CCDC188-202ENST00000444532 SEC11AP67812 179 aa11.74□□□□□ -0.53
CCDC188-202ENST00000444532 SCGB3A1Q96QR1 104 aa11.74□□□□□ -0.53
CCDC188-202ENST00000444532 MRPL35Q9NZE8 188 aaKnown RBP11.74□□□□□ -0.53
CCDC188-202ENST00000444532 NDUFA1O15239 70 aa11.73□□□□□ -0.53
CCDC188-202ENST00000444532 GAGE2BQ13066 116 aa11.73□□□□□ -0.53
CCDC188-202ENST00000444532 FA2HQ7L5A8 372 aa11.73□□□□□ -0.53
CCDC188-202ENST00000444532 KRTAP29-1A8MX34 341 aaPredicted RBP11.72□□□□□ -0.53
CCDC188-202ENST00000444532 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.72□□□□□ -0.53
CCDC188-202ENST00000444532 DMBT1Q9UGM3 2413 aaPredicted RBP11.71□□□□□ -0.53
CCDC188-202ENST00000444532 KIAA0087Q14695 138 aa11.71□□□□□ -0.53
CCDC188-202ENST00000444532 C18orf32Q8TCD1 76 aa11.71□□□□□ -0.53
CCDC188-202ENST00000444532 MYCBP2O75592 4640 aa11.7□□□□□ -0.54
CCDC188-202ENST00000444532 A0A0J9YXV3 536 aa11.7□□□□□ -0.54
CCDC188-202ENST00000444532 HERVK_113P63121 156 aa11.7□□□□□ -0.54
CCDC188-202ENST00000444532 UNQ6190/PRO20217Q6UXQ8 127 aa11.7□□□□□ -0.54
CCDC188-202ENST00000444532 J3QL48 77 aa11.69□□□□□ -0.54
CCDC188-202ENST00000444532 RPL18AQ02543 176 aaKnown RBP11.69□□□□□ -0.54
CCDC188-202ENST00000444532 C10orf25Q5T742 122 aa11.69□□□□□ -0.54
CCDC188-202ENST00000444532 URB1-AS1Q96HZ7 61 aa11.69□□□□□ -0.54
CCDC188-202ENST00000444532 TRGC2P03986 189 aa11.68□□□□□ -0.54
CCDC188-202ENST00000444532 GEMIN7Q9H840 131 aaKnown RBP11.68□□□□□ -0.54
CCDC188-202ENST00000444532 OXTP01178 125 aa11.67□□□□□ -0.54
CCDC188-202ENST00000444532 TLX1NBP0CAT3 122 aa11.67□□□□□ -0.54
CCDC188-202ENST00000444532 HNRNPA3P51991 378 aaKnown RBP11.67□□□□□ -0.54
CCDC188-202ENST00000444532 TRBV30A0A0K0K1B3 111 aa11.66□□□□□ -0.54
CCDC188-202ENST00000444532 PRSS2P07478 247 aa11.66□□□□□ -0.54
CCDC188-202ENST00000444532 LINC00614P0C842 121 aa11.66□□□□□ -0.54
CCDC188-202ENST00000444532 C6orf48Q9UBA6 75 aa11.66□□□□□ -0.54
CCDC188-202ENST00000444532 CDKN2A-AS1Q9UH64 79 aa11.66□□□□□ -0.54
CCDC188-202ENST00000444532 CST9LQ9H4G1 147 aa11.65□□□□□ -0.54
CCDC188-202ENST00000444532 TINCRA0A1B0GVN0 87 aa11.64□□□□□ -0.55
CCDC188-202ENST00000444532 A0A1W2PNN7 141 aa11.64□□□□□ -0.55
CCDC188-202ENST00000444532 ATP6V1G1O75348 118 aa11.64□□□□□ -0.55
CCDC188-202ENST00000444532 S100A1P23297 94 aa11.64□□□□□ -0.55
CCDC188-202ENST00000444532 RAB5BP61020 215 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms