RNA–Protein interactions for RNA: ENST00000444511.6

VSX1-206, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,197 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-206ENST00000444511 SRSF9Q13242 221 aaKnown RBP eCLIP13.02□□□□□ -0.33
VSX1-206ENST00000444511 C9orf116Q5BN46 136 aaPredicted RBP13.02□□□□□ -0.33
VSX1-206ENST00000444511 OPRPNQ99935 248 aaPredicted RBP13.02□□□□□ -0.33
VSX1-206ENST00000444511 TNXBP22105 4242 aa13.01□□□□□ -0.33
VSX1-206ENST00000444511 A0A1B0GXF2 115 aa13.01□□□□□ -0.33
VSX1-206ENST00000444511 NPYP01303 97 aa13.01□□□□□ -0.33
VSX1-206ENST00000444511 PPBPP02775 128 aa13.01□□□□□ -0.33
VSX1-206ENST00000444511 ORAOV1Q8WV07 137 aa13.01□□□□□ -0.33
VSX1-206ENST00000444511 MRPS36P82909 103 aaKnown RBP13□□□□□ -0.33
VSX1-206ENST00000444511 RNF151Q2KHN1 245 aa13□□□□□ -0.33
VSX1-206ENST00000444511 FAM104AQ969W3 186 aa13□□□□□ -0.33
VSX1-206ENST00000444511 IFITM10A6NMD0 228 aa12.99□□□□□ -0.33
VSX1-206ENST00000444511 IGHV3OR16-9A0A0B4J2B5 98 aa12.98□□□□□ -0.33
VSX1-206ENST00000444511 MT-ND6P03923 174 aa12.98□□□□□ -0.33
VSX1-206ENST00000444511 KRTAP10-8P60410 259 aa12.98□□□□□ -0.33
VSX1-206ENST00000444511 ODF1Q14990 250 aa12.98□□□□□ -0.33
VSX1-206ENST00000444511 MRPL35Q9NZE8 188 aaKnown RBP12.98□□□□□ -0.33
VSX1-206ENST00000444511 F8WDY8 70 aa12.97□□□□□ -0.33
VSX1-206ENST00000444511 RAB5AP20339 215 aa12.97□□□□□ -0.33
VSX1-206ENST00000444511 ORMDL3Q8N138 153 aa12.97□□□□□ -0.33
VSX1-206ENST00000444511 NDUFA1O15239 70 aa12.96□□□□□ -0.33
VSX1-206ENST00000444511 TMEM136Q6ZRR5 245 aa12.96□□□□□ -0.33
VSX1-206ENST00000444511 ATP5L2Q7Z4Y8 100 aa12.96□□□□□ -0.33
VSX1-206ENST00000444511 PRELID3AQ96N28 172 aa12.96□□□□□ -0.33
VSX1-206ENST00000444511 IMMP2LQ96T52 175 aa12.96□□□□□ -0.33
VSX1-206ENST00000444511 PSORS1C2Q9UIG4 136 aa12.96□□□□□ -0.33
VSX1-206ENST00000444511 IFI27P40305 119 aaPredicted RBP12.95□□□□□ -0.34
VSX1-206ENST00000444511 PHF5AQ7RTV0 110 aaKnown RBP12.95□□□□□ -0.34
VSX1-206ENST00000444511 TGIF2-C20orf24A0A0A6YYL0 155 aa12.94□□□□□ -0.34
VSX1-206ENST00000444511 C1orf137Q5JT78 98 aa12.92□□□□□ -0.34
VSX1-206ENST00000444511 C10orf25Q5T742 122 aa12.92□□□□□ -0.34
VSX1-206ENST00000444511 UNQ6190/PRO20217Q6UXQ8 127 aa12.92□□□□□ -0.34
VSX1-206ENST00000444511 PYGO1Q9Y3Y4 419 aa12.91□□□□□ -0.34
VSX1-206ENST00000444511 IGLV4-3A0A075B6K6 122 aa12.9□□□□□ -0.34
VSX1-206ENST00000444511 C6orf48Q9UBA6 75 aa12.9□□□□□ -0.34
VSX1-206ENST00000444511 A0A087WZ39 114 aa12.89□□□□□ -0.35
VSX1-206ENST00000444511 LOC389332A0A1B0GUA5 103 aa12.89□□□□□ -0.35
VSX1-206ENST00000444511 TLX1NBP0CAT3 122 aa12.89□□□□□ -0.35
VSX1-206ENST00000444511 TMEM141Q96I45 108 aa12.89□□□□□ -0.35
VSX1-206ENST00000444511 LAMTOR2Q9Y2Q5 125 aa12.89□□□□□ -0.35
VSX1-206ENST00000444511 FAM168BA1KXE4 195 aa12.88□□□□□ -0.35
VSX1-206ENST00000444511 GAGE2EQ4V326 116 aa12.88□□□□□ -0.35
VSX1-206ENST00000444511 LINC00242Q5T6M2 205 aa12.88□□□□□ -0.35
VSX1-206ENST00000444511 MAP1LC3AQ9H492 121 aa12.88□□□□□ -0.35
VSX1-206ENST00000444511 GAGE2DQ9UEU5 116 aa12.88□□□□□ -0.35
VSX1-206ENST00000444511 LRP2P98164 4655 aa12.87□□□□□ -0.35
VSX1-206ENST00000444511 TEX43Q6ZNM6 134 aa12.87□□□□□ -0.35
VSX1-206ENST00000444511 FAM19A5Q7Z5A7 132 aaPredicted RBP12.87□□□□□ -0.35
VSX1-206ENST00000444511 PRSS47A8MTI9 375 aa12.86□□□□□ -0.35
VSX1-206ENST00000444511 KIAA0087Q14695 138 aa12.86□□□□□ -0.35
VSX1-206ENST00000444511 IGLV7-43P04211 117 aa12.85□□□□□ -0.35
VSX1-206ENST00000444511 PNRC1Q12796 327 aaPredicted RBP12.85□□□□□ -0.35
VSX1-206ENST00000444511 C2orf88Q9BSF0 95 aa12.85□□□□□ -0.35
VSX1-206ENST00000444511 CYSLTR1Q9Y271 337 aa12.85□□□□□ -0.35
VSX1-206ENST00000444511 MT-ND4LP03901 98 aa12.84□□□□□ -0.35
VSX1-206ENST00000444511 Q6ZN92 141 aa12.84□□□□□ -0.35
VSX1-206ENST00000444511 DIRC1Q969H9 104 aa12.84□□□□□ -0.35
VSX1-206ENST00000444511 ANAPC16Q96DE5 110 aa12.84□□□□□ -0.35
VSX1-206ENST00000444511 TRBV30A0A0K0K1B3 111 aa12.83□□□□□ -0.36
VSX1-206ENST00000444511 UBE2D1P51668 147 aa12.83□□□□□ -0.36
VSX1-206ENST00000444511 C2orf82Q6UX34 121 aa12.83□□□□□ -0.36
VSX1-206ENST00000444511 C2orf66Q6UXQ4 117 aa12.83□□□□□ -0.36
VSX1-206ENST00000444511 Q8N8P6 123 aa12.83□□□□□ -0.36
VSX1-206ENST00000444511 PACRGQ96M98 296 aaPredicted RBP12.83□□□□□ -0.36
VSX1-206ENST00000444511 ORMDL2Q53FV1 153 aa12.81□□□□□ -0.36
VSX1-206ENST00000444511 KRTAP11-1Q8IUC1 163 aa12.81□□□□□ -0.36
VSX1-206ENST00000444511 LINC01561Q8N1V8 128 aa12.81□□□□□ -0.36
VSX1-206ENST00000444511 VCX2Q9H322 139 aa12.81□□□□□ -0.36
VSX1-206ENST00000444511 NDUFC2-KCTD14E9PQ53 114 aa12.8□□□□□ -0.36
VSX1-206ENST00000444511 M0QXV9 152 aa12.8□□□□□ -0.36
VSX1-206ENST00000444511 RAB14P61106 215 aa12.8□□□□□ -0.36
VSX1-206ENST00000444511 UBE2BP63146 152 aa12.8□□□□□ -0.36
VSX1-206ENST00000444511 ZC2HC1BQ5TFG8 222 aa12.8□□□□□ -0.36
VSX1-206ENST00000444511 PRSS2P07478 247 aa12.79□□□□□ -0.36
VSX1-206ENST00000444511 H0Y9J4 135 aa12.78□□□□□ -0.36
VSX1-206ENST00000444511 K7EMI3 77 aa12.78□□□□□ -0.36
VSX1-206ENST00000444511 LINC00173Q6ZV60 143 aa12.78□□□□□ -0.36
VSX1-206ENST00000444511 KRTAP7-1Q8IUC3 87 aa12.78□□□□□ -0.36
VSX1-206ENST00000444511 AMELXQ99217 191 aa12.78□□□□□ -0.36
VSX1-206ENST00000444511 TOMM7Q9P0U1 55 aa12.78□□□□□ -0.36
VSX1-206ENST00000444511 NPSP0C0P6 89 aa12.77□□□□□ -0.37
VSX1-206ENST00000444511 CKS1BP61024 79 aa12.76□□□□□ -0.37
VSX1-206ENST00000444511 PRR26Q8N8Z3 221 aa12.76□□□□□ -0.37
VSX1-206ENST00000444511 CTDSP1Q9GZU7 261 aa12.76□□□□□ -0.37
VSX1-206ENST00000444511 NXT2Q9NPJ8 142 aaKnown RBP12.76□□□□□ -0.37
VSX1-206ENST00000444511 RNF213Q63HN8 5207 aa12.76□□□□□ -0.37
VSX1-206ENST00000444511 IGIPA6NJ69 53 aa12.75□□□□□ -0.37
VSX1-206ENST00000444511 C6orf226Q5I0X4 101 aa12.75□□□□□ -0.37
VSX1-206ENST00000444511 C9orf129Q5T035 196 aaKnown RBP12.75□□□□□ -0.37
VSX1-206ENST00000444511 PAPPA-AS1Q5QFB9 102 aa12.74□□□□□ -0.37
VSX1-206ENST00000444511 G0S2P27469 103 aa12.73□□□□□ -0.37
VSX1-206ENST00000444511 FAM19A3Q7Z5A8 133 aa12.73□□□□□ -0.37
VSX1-206ENST00000444511 Q8IZM0 81 aa12.73□□□□□ -0.37
VSX1-206ENST00000444511 ALKBH7Q9BT30 221 aaPredicted RBP12.73□□□□□ -0.37
VSX1-206ENST00000444511 HERVK_113P63121 156 aa12.72□□□□□ -0.37
VSX1-206ENST00000444511 SEC11AP67812 179 aa12.72□□□□□ -0.37
VSX1-206ENST00000444511 GEMIN7Q9H840 131 aaKnown RBP12.71□□□□□ -0.37
VSX1-206ENST00000444511 LINC00469Q8N7U9 141 aa12.7□□□□□ -0.38
VSX1-206ENST00000444511 TIMM17AQ99595 171 aa12.7□□□□□ -0.38
VSX1-206ENST00000444511 CDKN2A-AS1Q9UH64 79 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 106.9 ms