RNA–Protein interactions for RNA: ENST00000443206.2

TOM1-208, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 4

Gene TOM1, Length 567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-208ENST00000443206 IGLV4-69A0A075B6H9 119 aa8.34□□□□□ -1.07
TOM1-208ENST00000443206 TMEM141Q96I45 108 aa8.34□□□□□ -1.07
TOM1-208ENST00000443206 LINC00474Q9P2X8 69 aa8.34□□□□□ -1.07
TOM1-208ENST00000443206 CYSLTR1Q9Y271 337 aa8.34□□□□□ -1.07
TOM1-208ENST00000443206 IGLV4-3A0A075B6K6 122 aa8.33□□□□□ -1.08
TOM1-208ENST00000443206 G0S2P27469 103 aa8.33□□□□□ -1.08
TOM1-208ENST00000443206 KRTAP10-4P60372 401 aaPredicted RBP8.33□□□□□ -1.08
TOM1-208ENST00000443206 KIAA1644Q3SXP7 199 aa8.33□□□□□ -1.08
TOM1-208ENST00000443206 C2orf66Q6UXQ4 117 aa8.33□□□□□ -1.08
TOM1-208ENST00000443206 CAMK2N2Q96S95 79 aa8.33□□□□□ -1.08
TOM1-208ENST00000443206 PLAC8Q9NZF1 115 aa8.33□□□□□ -1.08
TOM1-208ENST00000443206 A0A096LNI7 61 aa8.32□□□□□ -1.08
TOM1-208ENST00000443206 TGIF2-C20orf24A0A0A6YYL0 155 aa8.32□□□□□ -1.08
TOM1-208ENST00000443206 IGHV3OR16-9A0A0B4J2B5 98 aa8.32□□□□□ -1.08
TOM1-208ENST00000443206 COX19Q49B96 90 aa8.32□□□□□ -1.08
TOM1-208ENST00000443206 C10orf91Q5T1B1 145 aa8.32□□□□□ -1.08
TOM1-208ENST00000443206 Q6ZN92 141 aa8.32□□□□□ -1.08
TOM1-208ENST00000443206 TEX43Q6ZNM6 134 aa8.32□□□□□ -1.08
TOM1-208ENST00000443206 STPG4Q8N801 248 aa8.32□□□□□ -1.08
TOM1-208ENST00000443206 OR10D4PQ8NGN7 298 aa8.32□□□□□ -1.08
TOM1-208ENST00000443206 C2orf48Q96LS8 159 aa8.32□□□□□ -1.08
TOM1-208ENST00000443206 GNB1LQ9BYB4 327 aa8.32□□□□□ -1.08
TOM1-208ENST00000443206 RPS10P5Q9NQ39 176 aa8.32□□□□□ -1.08
TOM1-208ENST00000443206 MYCBP2O75592 4640 aa8.31□□□□□ -1.08
TOM1-208ENST00000443206 J3QL48 77 aa8.31□□□□□ -1.08
TOM1-208ENST00000443206 SPAG11BQ08648 103 aa8.31□□□□□ -1.08
TOM1-208ENST00000443206 RHEBQ15382 184 aa8.31□□□□□ -1.08
TOM1-208ENST00000443206 Q6ZRU5 148 aa8.31□□□□□ -1.08
TOM1-208ENST00000443206 C7orf33Q8WU49 177 aa8.31□□□□□ -1.08
TOM1-208ENST00000443206 C2orf88Q9BSF0 95 aa8.31□□□□□ -1.08
TOM1-208ENST00000443206 VCX2Q9H322 139 aa8.31□□□□□ -1.08
TOM1-208ENST00000443206 CARHSP1Q9Y2V2 147 aaKnown RBP8.31□□□□□ -1.08
TOM1-208ENST00000443206 LOC107984640A0A0U1RRK4 108 aa8.3□□□□□ -1.08
TOM1-208ENST00000443206 ORAOV1Q8WV07 137 aa8.3□□□□□ -1.08
TOM1-208ENST00000443206 F8WDY8 70 aa8.29□□□□□ -1.08
TOM1-208ENST00000443206 NPSP0C0P6 89 aa8.29□□□□□ -1.08
TOM1-208ENST00000443206 PAPPA-AS1Q5QFB9 102 aa8.29□□□□□ -1.08
TOM1-208ENST00000443206 LINC00242Q5T6M2 205 aa8.29□□□□□ -1.08
TOM1-208ENST00000443206 A0A087WZ39 114 aa8.28□□□□□ -1.08
TOM1-208ENST00000443206 KRTAP29-1A8MX34 341 aaPredicted RBP8.28□□□□□ -1.08
TOM1-208ENST00000443206 MT-ND6P03923 174 aa8.28□□□□□ -1.08
TOM1-208ENST00000443206 FABP9Q0Z7S8 132 aa8.28□□□□□ -1.08
TOM1-208ENST00000443206 GAGE2BQ13066 116 aa8.28□□□□□ -1.08
TOM1-208ENST00000443206 RNF151Q2KHN1 245 aa8.28□□□□□ -1.08
TOM1-208ENST00000443206 IGIPA6NJ69 53 aa8.27□□□□□ -1.09
TOM1-208ENST00000443206 NDUFA1O15239 70 aa8.27□□□□□ -1.09
TOM1-208ENST00000443206 UBE2D1P51668 147 aa8.27□□□□□ -1.09
TOM1-208ENST00000443206 PTTG1IPP53801 180 aa8.27□□□□□ -1.09
TOM1-208ENST00000443206 NDUFA5Q16718 116 aa8.27□□□□□ -1.09
TOM1-208ENST00000443206 AMELXQ99217 191 aa8.27□□□□□ -1.09
TOM1-208ENST00000443206 ALKBH7Q9BT30 221 aaPredicted RBP8.27□□□□□ -1.09
TOM1-208ENST00000443206 MRPL18Q9H0U6 180 aaKnown RBP8.27□□□□□ -1.09
TOM1-208ENST00000443206 LINC01549A6NIU2 74 aa8.26□□□□□ -1.09
TOM1-208ENST00000443206 APOC3P02656 99 aa8.26□□□□□ -1.09
TOM1-208ENST00000443206 ZC2HC1BQ5TFG8 222 aa8.26□□□□□ -1.09
TOM1-208ENST00000443206 TOMM6Q96B49 74 aa8.26□□□□□ -1.09
TOM1-208ENST00000443206 TIMM17AQ99595 171 aa8.26□□□□□ -1.09
TOM1-208ENST00000443206 MRPL35Q9NZE8 188 aaKnown RBP8.26□□□□□ -1.09
TOM1-208ENST00000443206 OXTP01178 125 aa8.25□□□□□ -1.09
TOM1-208ENST00000443206 SEC11AP67812 179 aa8.25□□□□□ -1.09
TOM1-208ENST00000443206 RPL18AQ02543 176 aaKnown RBP8.25□□□□□ -1.09
TOM1-208ENST00000443206 LINC00173Q6ZV60 143 aa8.25□□□□□ -1.09
TOM1-208ENST00000443206 LINC01561Q8N1V8 128 aa8.25□□□□□ -1.09
TOM1-208ENST00000443206 SCGB3A1Q96QR1 104 aa8.25□□□□□ -1.09
TOM1-208ENST00000443206 A0A0J9YXV3 536 aa8.24□□□□□ -1.09
TOM1-208ENST00000443206 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.24□□□□□ -1.09
TOM1-208ENST00000443206 SNAPINO95295 136 aa8.24□□□□□ -1.09
TOM1-208ENST00000443206 UNQ6190/PRO20217Q6UXQ8 127 aa8.24□□□□□ -1.09
TOM1-208ENST00000443206 FA2HQ7L5A8 372 aa8.24□□□□□ -1.09
TOM1-208ENST00000443206 ERASQ7Z444 233 aa8.24□□□□□ -1.09
TOM1-208ENST00000443206 SVBPQ8N300 66 aa8.24□□□□□ -1.09
TOM1-208ENST00000443206 SMCO4Q9NRQ5 59 aa8.24□□□□□ -1.09
TOM1-208ENST00000443206 HNRNPA3P51991 378 aaKnown RBP8.23□□□□□ -1.09
TOM1-208ENST00000443206 HERVK_113P63121 156 aa8.23□□□□□ -1.09
TOM1-208ENST00000443206 FAM19A3Q7Z5A8 133 aa8.23□□□□□ -1.09
TOM1-208ENST00000443206 TRAPPC1Q9Y5R8 145 aa8.23□□□□□ -1.09
TOM1-208ENST00000443206 HERC1Q15751 4861 aa8.23□□□□□ -1.09
TOM1-208ENST00000443206 PKHD1L1Q86WI1 4243 aa8.23□□□□□ -1.09
TOM1-208ENST00000443206 LINC01546A6NGU7 62 aa8.22□□□□□ -1.09
TOM1-208ENST00000443206 PRSS2P07478 247 aa8.22□□□□□ -1.09
TOM1-208ENST00000443206 KIAA0087Q14695 138 aa8.22□□□□□ -1.09
TOM1-208ENST00000443206 GEMIN7Q9H840 131 aaKnown RBP8.22□□□□□ -1.09
TOM1-208ENST00000443206 C10orf25Q5T742 122 aa8.21□□□□□ -1.1
TOM1-208ENST00000443206 PACRGQ96M98 296 aaPredicted RBP8.21□□□□□ -1.1
TOM1-208ENST00000443206 TRBV30A0A0K0K1B3 111 aa8.2□□□□□ -1.1
TOM1-208ENST00000443206 TLX1NBP0CAT3 122 aa8.2□□□□□ -1.1
TOM1-208ENST00000443206 C9orf116Q5BN46 136 aaPredicted RBP8.2□□□□□ -1.1
TOM1-208ENST00000443206 C6orf226Q5I0X4 101 aa8.2□□□□□ -1.1
TOM1-208ENST00000443206 TOMM7Q9P0U1 55 aa8.2□□□□□ -1.1
TOM1-208ENST00000443206 C6orf48Q9UBA6 75 aa8.2□□□□□ -1.1
TOM1-208ENST00000443206 A0A1W2PNN7 141 aa8.19□□□□□ -1.1
TOM1-208ENST00000443206 CKS1BP61024 79 aa8.19□□□□□ -1.1
TOM1-208ENST00000443206 PRR3P79522 188 aaKnown RBP8.19□□□□□ -1.1
TOM1-208ENST00000443206 C2orf82Q6UX34 121 aa8.19□□□□□ -1.1
TOM1-208ENST00000443206 CDKN2A-AS1Q9UH64 79 aa8.19□□□□□ -1.1
TOM1-208ENST00000443206 GAGE2EQ4V326 116 aa8.18□□□□□ -1.1
TOM1-208ENST00000443206 Q6ZRP5 223 aa8.18□□□□□ -1.1
TOM1-208ENST00000443206 Q8IZM0 81 aa8.18□□□□□ -1.1
TOM1-208ENST00000443206 GAGE2DQ9UEU5 116 aa8.18□□□□□ -1.1
TOM1-208ENST00000443206 LRP1Q07954 4544 aaKnown RBP8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms