RNA–Protein interactions for RNA: ENST00000440552.5

PTPRN-205, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 4

Gene PTPRN, Length 579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-205ENST00000440552 KRTAP7-1Q8IUC3 87 aa8.47□□□□□ -1.05
PTPRN-205ENST00000440552 C6orf48Q9UBA6 75 aa8.47□□□□□ -1.05
PTPRN-205ENST00000440552 TCAPO15273 167 aa8.46□□□□□ -1.06
PTPRN-205ENST00000440552 RPL32P62910 135 aaKnown RBP8.46□□□□□ -1.06
PTPRN-205ENST00000440552 UNQ6190/PRO20217Q6UXQ8 127 aa8.46□□□□□ -1.06
PTPRN-205ENST00000440552 FAM104AQ969W3 186 aa8.46□□□□□ -1.06
PTPRN-205ENST00000440552 OSTCQ9NRP0 149 aa8.46□□□□□ -1.06
PTPRN-205ENST00000440552 M0QXV9 152 aa8.45□□□□□ -1.06
PTPRN-205ENST00000440552 MRPS36P82909 103 aaKnown RBP8.45□□□□□ -1.06
PTPRN-205ENST00000440552 LINC01551Q86U37 167 aa8.45□□□□□ -1.06
PTPRN-205ENST00000440552 C20orf78Q9BR46 151 aa8.45□□□□□ -1.06
PTPRN-205ENST00000440552 UBE2BP63146 152 aa8.44□□□□□ -1.06
PTPRN-205ENST00000440552 GAGE2EQ4V326 116 aa8.44□□□□□ -1.06
PTPRN-205ENST00000440552 SPANXA1Q9NS26 97 aa8.44□□□□□ -1.06
PTPRN-205ENST00000440552 GAGE2DQ9UEU5 116 aa8.44□□□□□ -1.06
PTPRN-205ENST00000440552 TRBV24-1A0A075B6N3 115 aa8.43□□□□□ -1.06
PTPRN-205ENST00000440552 LINC00862A6NCI5 91 aa8.43□□□□□ -1.06
PTPRN-205ENST00000440552 KIAA0087Q14695 138 aa8.43□□□□□ -1.06
PTPRN-205ENST00000440552 LCE2AQ5TA79 106 aaPredicted RBP8.43□□□□□ -1.06
PTPRN-205ENST00000440552 TRBV30A0A0K0K1B3 111 aa8.42□□□□□ -1.06
PTPRN-205ENST00000440552 ZNF861PO60384 105 aa8.42□□□□□ -1.06
PTPRN-205ENST00000440552 RPL39P62891 51 aaKnown RBP8.42□□□□□ -1.06
PTPRN-205ENST00000440552 HBBP68871 147 aa8.42□□□□□ -1.06
PTPRN-205ENST00000440552 BLOC1S1P78537 153 aa8.42□□□□□ -1.06
PTPRN-205ENST00000440552 MRPL51Q4U2R6 128 aaKnown RBP8.42□□□□□ -1.06
PTPRN-205ENST00000440552 FAM104BQ5XKR9 115 aa8.42□□□□□ -1.06
PTPRN-205ENST00000440552 TCTE3Q8IZS6 198 aa8.42□□□□□ -1.06
PTPRN-205ENST00000440552 SMIM7Q9BQ49 75 aa8.42□□□□□ -1.06
PTPRN-205ENST00000440552 IFITM10A6NMD0 228 aa8.41□□□□□ -1.06
PTPRN-205ENST00000440552 NDUFC2-KCTD14E9PQ53 114 aa8.41□□□□□ -1.06
PTPRN-205ENST00000440552 CEBPGP53567 150 aa8.41□□□□□ -1.06
PTPRN-205ENST00000440552 V9GYV3 84 aa8.41□□□□□ -1.06
PTPRN-205ENST00000440552 TGIF2-C20orf24A0A0A6YYL0 155 aa8.4□□□□□ -1.06
PTPRN-205ENST00000440552 NAT8BQ9UHF3 227 aa8.4□□□□□ -1.06
PTPRN-205ENST00000440552 ZNF727A8MUV8 499 aa8.39□□□□□ -1.07
PTPRN-205ENST00000440552 C9orf129Q5T035 196 aaKnown RBP8.39□□□□□ -1.07
PTPRN-205ENST00000440552 SMIM2Q9BVW6 85 aa8.39□□□□□ -1.07
PTPRN-205ENST00000440552 NUPR1O60356 82 aa8.38□□□□□ -1.07
PTPRN-205ENST00000440552 TNFRSF6BO95407 300 aa8.38□□□□□ -1.07
PTPRN-205ENST00000440552 CKS2P33552 79 aa8.38□□□□□ -1.07
PTPRN-205ENST00000440552 KRTAP9-6A0A140TA67 174 aa8.37□□□□□ -1.07
PTPRN-205ENST00000440552 A0A1B0GW15 77 aa8.37□□□□□ -1.07
PTPRN-205ENST00000440552 LINC01561Q8N1V8 128 aa8.37□□□□□ -1.07
PTPRN-205ENST00000440552 PACRGQ96M98 296 aaPredicted RBP8.37□□□□□ -1.07
PTPRN-205ENST00000440552 TSPAN13O95857 204 aa8.36□□□□□ -1.07
PTPRN-205ENST00000440552 FAM74A3Q4VXF1 159 aa8.36□□□□□ -1.07
PTPRN-205ENST00000440552 LINC00242Q5T6M2 205 aa8.36□□□□□ -1.07
PTPRN-205ENST00000440552 C2orf82Q6UX34 121 aa8.36□□□□□ -1.07
PTPRN-205ENST00000440552 EIF5A2Q9GZV4 153 aaKnown RBP8.36□□□□□ -1.07
PTPRN-205ENST00000440552 PYGO1Q9Y3Y4 419 aa8.36□□□□□ -1.07
PTPRN-205ENST00000440552 SRP19P09132 144 aaKnown RBP8.35□□□□□ -1.07
PTPRN-205ENST00000440552 LBHQ53QV2 105 aaPredicted RBP8.35□□□□□ -1.07
PTPRN-205ENST00000440552 ALKAL2Q6UX46 152 aa8.35□□□□□ -1.07
PTPRN-205ENST00000440552 SMIM27A0A1W2PRY6 76 aa8.34□□□□□ -1.07
PTPRN-205ENST00000440552 IFI27P40305 119 aaPredicted RBP8.34□□□□□ -1.07
PTPRN-205ENST00000440552 C22orf24Q9Y442 160 aa8.34□□□□□ -1.07
PTPRN-205ENST00000440552 MUC17Q685J3 4493 aa8.34□□□□□ -1.07
PTPRN-205ENST00000440552 IGLV4-3A0A075B6K6 122 aa8.33□□□□□ -1.08
PTPRN-205ENST00000440552 A0A087X002 238 aa8.33□□□□□ -1.08
PTPRN-205ENST00000440552 D6R8Y8 96 aa8.33□□□□□ -1.08
PTPRN-205ENST00000440552 NPYP01303 97 aa8.33□□□□□ -1.08
PTPRN-205ENST00000440552 PPBPP02775 128 aa8.33□□□□□ -1.08
PTPRN-205ENST00000440552 CRYGAP11844 174 aa8.33□□□□□ -1.08
PTPRN-205ENST00000440552 CTDSP1Q9GZU7 261 aa8.33□□□□□ -1.08
PTPRN-205ENST00000440552 S100A8P05109 93 aa8.32□□□□□ -1.08
PTPRN-205ENST00000440552 RPL28P46779 137 aaKnown RBP8.32□□□□□ -1.08
PTPRN-205ENST00000440552 TMEM141Q96I45 108 aa8.32□□□□□ -1.08
PTPRN-205ENST00000440552 TP73-AS1Q9UF72 201 aa8.32□□□□□ -1.08
PTPRN-205ENST00000440552 F8W036 122 aa8.31□□□□□ -1.08
PTPRN-205ENST00000440552 RAB5AP20339 215 aa8.31□□□□□ -1.08
PTPRN-205ENST00000440552 RPL23P62829 140 aaKnown RBP8.31□□□□□ -1.08
PTPRN-205ENST00000440552 TYMSOSQ8TAI1 123 aa8.31□□□□□ -1.08
PTPRN-205ENST00000440552 BCE1O60756 84 aa8.3□□□□□ -1.08
PTPRN-205ENST00000440552 A0A1B0GXF2 115 aa8.29□□□□□ -1.08
PTPRN-205ENST00000440552 PRSS2P07478 247 aa8.29□□□□□ -1.08
PTPRN-205ENST00000440552 CKS1BP61024 79 aa8.29□□□□□ -1.08
PTPRN-205ENST00000440552 Q6ZN92 141 aa8.29□□□□□ -1.08
PTPRN-205ENST00000440552 TEX43Q6ZNM6 134 aa8.29□□□□□ -1.08
PTPRN-205ENST00000440552 ADIRFQ15847 76 aa8.28□□□□□ -1.08
PTPRN-205ENST00000440552 MRPL55Q7Z7F7 128 aaKnown RBP8.28□□□□□ -1.08
PTPRN-205ENST00000440552 Q8IZM0 81 aa8.28□□□□□ -1.08
PTPRN-205ENST00000440552 ORMDL3Q8N138 153 aa8.28□□□□□ -1.08
PTPRN-205ENST00000440552 LINC00469Q8N7U9 141 aa8.28□□□□□ -1.08
PTPRN-205ENST00000440552 C2orf88Q9BSF0 95 aa8.28□□□□□ -1.08
PTPRN-205ENST00000440552 XAGE1AQ9HD64 81 aa8.28□□□□□ -1.08
PTPRN-205ENST00000440552 NAT8Q9UHE5 227 aa8.28□□□□□ -1.08
PTPRN-205ENST00000440552 PRSS47A8MTI9 375 aa8.27□□□□□ -1.09
PTPRN-205ENST00000440552 C6orf226Q5I0X4 101 aa8.27□□□□□ -1.09
PTPRN-205ENST00000440552 MRPL54Q6P161 138 aaKnown RBP8.27□□□□□ -1.09
PTPRN-205ENST00000440552 AMELXQ99217 191 aa8.27□□□□□ -1.09
PTPRN-205ENST00000440552 NPSP0C0P6 89 aa8.26□□□□□ -1.09
PTPRN-205ENST00000440552 TPRXLQ17RH7 258 aa8.26□□□□□ -1.09
PTPRN-205ENST00000440552 TMEM136Q6ZRR5 245 aa8.26□□□□□ -1.09
PTPRN-205ENST00000440552 LINC00173Q6ZV60 143 aa8.26□□□□□ -1.09
PTPRN-205ENST00000440552 FAM19A3Q7Z5A8 133 aa8.26□□□□□ -1.09
PTPRN-205ENST00000440552 TOMM7Q9P0U1 55 aa8.26□□□□□ -1.09
PTPRN-205ENST00000440552 CTAG1AP78358 180 aa8.25□□□□□ -1.09
PTPRN-205ENST00000440552 FAM229BQ4G0N7 80 aa8.25□□□□□ -1.09
PTPRN-205ENST00000440552 KRTAP13-2Q52LG2 175 aa8.25□□□□□ -1.09
PTPRN-205ENST00000440552 PRELID3AQ96N28 172 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms