RNA–Protein interactions for RNA: ENST00000440271.5

TRIM39-210, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-210ENST00000440271 M0QXV9 152 aa12.24□□□□□ -0.45
TRIM39-210ENST00000440271 SUMO2P61956 95 aaKnown RBP12.24□□□□□ -0.45
TRIM39-210ENST00000440271 SMDT1Q9H4I9 107 aa12.24□□□□□ -0.45
TRIM39-210ENST00000440271 NRACQ8N912 160 aa12.23□□□□□ -0.45
TRIM39-210ENST00000440271 TMEM18Q96B42 140 aa12.23□□□□□ -0.45
TRIM39-210ENST00000440271 PPP1R17O96001 155 aa12.22□□□□□ -0.45
TRIM39-210ENST00000440271 FAM104AQ969W3 186 aa12.21□□□□□ -0.45
TRIM39-210ENST00000440271 TMEM250H0YL14 139 aa12.2□□□□□ -0.46
TRIM39-210ENST00000440271 ZNF861PO60384 105 aa12.19□□□□□ -0.46
TRIM39-210ENST00000440271 PPP1R2P9O14990 202 aa12.18□□□□□ -0.46
TRIM39-210ENST00000440271 RPL39P62891 51 aaKnown RBP12.18□□□□□ -0.46
TRIM39-210ENST00000440271 KIAA0087Q14695 138 aa12.17□□□□□ -0.46
TRIM39-210ENST00000440271 RIGQ13278 110 aa12.16□□□□□ -0.46
TRIM39-210ENST00000440271 C9orf129Q5T035 196 aaKnown RBP12.16□□□□□ -0.46
TRIM39-210ENST00000440271 CEBPGP53567 150 aa12.15□□□□□ -0.46
TRIM39-210ENST00000440271 TRBV30A0A0K0K1B3 111 aa12.14□□□□□ -0.47
TRIM39-210ENST00000440271 IFITM10A6NMD0 228 aa12.14□□□□□ -0.47
TRIM39-210ENST00000440271 NDUFC2-KCTD14E9PQ53 114 aa12.14□□□□□ -0.47
TRIM39-210ENST00000440271 MRPS36P82909 103 aaKnown RBP12.14□□□□□ -0.47
TRIM39-210ENST00000440271 SPANXA1Q9NS26 97 aa12.14□□□□□ -0.47
TRIM39-210ENST00000440271 HBBP68871 147 aa12.13□□□□□ -0.47
TRIM39-210ENST00000440271 MRPL51Q4U2R6 128 aaKnown RBP12.13□□□□□ -0.47
TRIM39-210ENST00000440271 C2orf82Q6UX34 121 aa12.13□□□□□ -0.47
TRIM39-210ENST00000440271 LINC01551Q86U37 167 aa12.13□□□□□ -0.47
TRIM39-210ENST00000440271 SLC51BQ86UW2 128 aa12.13□□□□□ -0.47
TRIM39-210ENST00000440271 C20orf78Q9BR46 151 aa12.13□□□□□ -0.47
TRIM39-210ENST00000440271 OSTCQ9NRP0 149 aa12.13□□□□□ -0.47
TRIM39-210ENST00000440271 A0A087X002 238 aa12.12□□□□□ -0.47
TRIM39-210ENST00000440271 TGIF2-C20orf24A0A0A6YYL0 155 aa12.12□□□□□ -0.47
TRIM39-210ENST00000440271 TCAPO15273 167 aa12.12□□□□□ -0.47
TRIM39-210ENST00000440271 TRBV24-1A0A075B6N3 115 aa12.11□□□□□ -0.47
TRIM39-210ENST00000440271 RPL32P62910 135 aaKnown RBP12.11□□□□□ -0.47
TRIM39-210ENST00000440271 FAM104BQ5XKR9 115 aa12.11□□□□□ -0.47
TRIM39-210ENST00000440271 LINC00862A6NCI5 91 aa12.1□□□□□ -0.47
TRIM39-210ENST00000440271 NUPR1O60356 82 aa12.1□□□□□ -0.47
TRIM39-210ENST00000440271 PACRGQ96M98 296 aaPredicted RBP12.1□□□□□ -0.47
TRIM39-210ENST00000440271 TYMSOSQ8TAI1 123 aa12.09□□□□□ -0.47
TRIM39-210ENST00000440271 SMIM7Q9BQ49 75 aa12.09□□□□□ -0.47
TRIM39-210ENST00000440271 CTDSP1Q9GZU7 261 aa12.09□□□□□ -0.47
TRIM39-210ENST00000440271 V9GYV3 84 aa12.09□□□□□ -0.47
TRIM39-210ENST00000440271 CRYGAP11844 174 aa12.08□□□□□ -0.48
TRIM39-210ENST00000440271 C22orf24Q9Y442 160 aa12.08□□□□□ -0.48
TRIM39-210ENST00000440271 TNFRSF6BO95407 300 aa12.07□□□□□ -0.48
TRIM39-210ENST00000440271 CKS2P33552 79 aa12.07□□□□□ -0.48
TRIM39-210ENST00000440271 LINC00242Q5T6M2 205 aa12.07□□□□□ -0.48
TRIM39-210ENST00000440271 SMIM2Q9BVW6 85 aa12.06□□□□□ -0.48
TRIM39-210ENST00000440271 NAT8BQ9UHF3 227 aa12.06□□□□□ -0.48
TRIM39-210ENST00000440271 BLOC1S1P78537 153 aa12.05□□□□□ -0.48
TRIM39-210ENST00000440271 LBHQ53QV2 105 aaPredicted RBP12.05□□□□□ -0.48
TRIM39-210ENST00000440271 MUC17Q685J3 4493 aa12.05□□□□□ -0.48
TRIM39-210ENST00000440271 ZNF727A8MUV8 499 aa12.04□□□□□ -0.48
TRIM39-210ENST00000440271 RPL28P46779 137 aaKnown RBP12.04□□□□□ -0.48
TRIM39-210ENST00000440271 LINC00469Q8N7U9 141 aa12.04□□□□□ -0.48
TRIM39-210ENST00000440271 RETNLBQ9BQ08 111 aa12.04□□□□□ -0.48
TRIM39-210ENST00000440271 IFI27P40305 119 aaPredicted RBP12.02□□□□□ -0.49
TRIM39-210ENST00000440271 EIF5A2Q9GZV4 153 aaKnown RBP12.02□□□□□ -0.49
TRIM39-210ENST00000440271 CDIP1Q9H305 208 aa12.02□□□□□ -0.49
TRIM39-210ENST00000440271 FAM74A3Q4VXF1 159 aa12.01□□□□□ -0.49
TRIM39-210ENST00000440271 LINC01561Q8N1V8 128 aa12.01□□□□□ -0.49
TRIM39-210ENST00000440271 XAGE1AQ9HD64 81 aa12.01□□□□□ -0.49
TRIM39-210ENST00000440271 ANAPC11Q9NYG5 84 aa12.01□□□□□ -0.49
TRIM39-210ENST00000440271 D6R8Y8 96 aa12□□□□□ -0.49
TRIM39-210ENST00000440271 BCE1O60756 84 aa12□□□□□ -0.49
TRIM39-210ENST00000440271 NPYP01303 97 aa12□□□□□ -0.49
TRIM39-210ENST00000440271 PYGO1Q9Y3Y4 419 aa12□□□□□ -0.49
TRIM39-210ENST00000440271 IGLV4-3A0A075B6K6 122 aa11.99□□□□□ -0.49
TRIM39-210ENST00000440271 ALKAL2Q6UX46 152 aa11.99□□□□□ -0.49
TRIM39-210ENST00000440271 TCTE3Q8IZS6 198 aa11.99□□□□□ -0.49
TRIM39-210ENST00000440271 A0A1B0GW15 77 aa11.98□□□□□ -0.49
TRIM39-210ENST00000440271 PRSS2P07478 247 aa11.98□□□□□ -0.49
TRIM39-210ENST00000440271 CKS1BP61024 79 aa11.98□□□□□ -0.49
TRIM39-210ENST00000440271 TPRXLQ17RH7 258 aa11.98□□□□□ -0.49
TRIM39-210ENST00000440271 KRTAP13-2Q52LG2 175 aa11.98□□□□□ -0.49
TRIM39-210ENST00000440271 MRPL55Q7Z7F7 128 aaKnown RBP11.98□□□□□ -0.49
TRIM39-210ENST00000440271 TMEM141Q96I45 108 aa11.98□□□□□ -0.49
TRIM39-210ENST00000440271 TP73-AS1Q9UF72 201 aa11.98□□□□□ -0.49
TRIM39-210ENST00000440271 SMIM27A0A1W2PRY6 76 aa11.97□□□□□ -0.49
TRIM39-210ENST00000440271 SRP19P09132 144 aaKnown RBP11.97□□□□□ -0.49
TRIM39-210ENST00000440271 RAB5AP20339 215 aa11.97□□□□□ -0.49
TRIM39-210ENST00000440271 TOMM7Q9P0U1 55 aa11.97□□□□□ -0.49
TRIM39-210ENST00000440271 C6orf226Q5I0X4 101 aa11.96□□□□□ -0.49
TRIM39-210ENST00000440271 TEX43Q6ZNM6 134 aa11.96□□□□□ -0.49
TRIM39-210ENST00000440271 IGLV7-46A0A075B6I9 117 aa11.95□□□□□ -0.5
TRIM39-210ENST00000440271 Q6ZN92 141 aa11.95□□□□□ -0.5
TRIM39-210ENST00000440271 RPL23P62829 140 aaKnown RBP11.94□□□□□ -0.5
TRIM39-210ENST00000440271 LINC00304Q8N9R0 145 aa11.94□□□□□ -0.5
TRIM39-210ENST00000440271 F8W036 122 aa11.93□□□□□ -0.5
TRIM39-210ENST00000440271 PPBPP02775 128 aa11.93□□□□□ -0.5
TRIM39-210ENST00000440271 Q8IZM0 81 aa11.93□□□□□ -0.5
TRIM39-210ENST00000440271 RPL37AP8A6NKH3 93 aa11.92□□□□□ -0.5
TRIM39-210ENST00000440271 ZC2HC1BQ5TFG8 222 aa11.92□□□□□ -0.5
TRIM39-210ENST00000440271 LINC00173Q6ZV60 143 aa11.92□□□□□ -0.5
TRIM39-210ENST00000440271 LINC00167Q96N53 147 aa11.92□□□□□ -0.5
TRIM39-210ENST00000440271 C2orf88Q9BSF0 95 aa11.92□□□□□ -0.5
TRIM39-210ENST00000440271 ALKBH7Q9BT30 221 aaPredicted RBP11.92□□□□□ -0.5
TRIM39-210ENST00000440271 S100A8P05109 93 aa11.91□□□□□ -0.5
TRIM39-210ENST00000440271 MRPL54Q6P161 138 aaKnown RBP11.91□□□□□ -0.5
TRIM39-210ENST00000440271 ADIRFQ15847 76 aa11.9□□□□□ -0.5
TRIM39-210ENST00000440271 FAM229BQ4G0N7 80 aa11.9□□□□□ -0.5
TRIM39-210ENST00000440271 TMEM136Q6ZRR5 245 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms