RNA–Protein interactions for RNA: ENST00000439541.6

CBX5-202, Transcript of chromobox 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX5, Length 1,832 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5-202ENST00000439541 VCX2Q9H322 139 aa6.99□□□□□ -1.29
CBX5-202ENST00000439541 TRBV10-1A0A0K0K1A3 114 aa6.98□□□□□ -1.29
CBX5-202ENST00000439541 LEPROTO15243 131 aa6.98□□□□□ -1.29
CBX5-202ENST00000439541 CIDEAO60543 219 aa6.98□□□□□ -1.29
CBX5-202ENST00000439541 IGHV3-30P01768 117 aa6.98□□□□□ -1.29
CBX5-202ENST00000439541 NHLRC4P0CG21 123 aaPredicted RBP6.98□□□□□ -1.29
CBX5-202ENST00000439541 IGHV3-30-5P0DP03 117 aa6.98□□□□□ -1.29
CBX5-202ENST00000439541 DEFB131BA0A096LNP1 70 aa6.97□□□□□ -1.29
CBX5-202ENST00000439541 LOC107984156A0A0G2JMH3 177 aa6.97□□□□□ -1.29
CBX5-202ENST00000439541 APOMO95445 188 aa6.97□□□□□ -1.29
CBX5-202ENST00000439541 LINC00694P0DN24 101 aa6.97□□□□□ -1.29
CBX5-202ENST00000439541 RPL36AP83881 106 aaKnown RBP6.97□□□□□ -1.29
CBX5-202ENST00000439541 ARL17AQ8IVW1 177 aa6.97□□□□□ -1.29
CBX5-202ENST00000439541 C10orf126Q8N4M7 172 aa6.97□□□□□ -1.29
CBX5-202ENST00000439541 RPL36ALQ969Q0 106 aaKnown RBP6.97□□□□□ -1.29
CBX5-202ENST00000439541 TMEM223A0PJW6 202 aa6.97□□□□□ -1.29
CBX5-202ENST00000439541 SH2D6Q7Z4S9 175 aa6.97□□□□□ -1.29
CBX5-202ENST00000439541 PRO1854Q9UHT4 67 aa6.97□□□□□ -1.29
CBX5-202ENST00000439541 PYGO1Q9Y3Y4 419 aa6.97□□□□□ -1.29
CBX5-202ENST00000439541 PSMB2P49721 201 aa6.96□□□□□ -1.3
CBX5-202ENST00000439541 FOXI1Q12951 378 aa6.96□□□□□ -1.3
CBX5-202ENST00000439541 DNAJC30Q96LL9 226 aa6.96□□□□□ -1.3
CBX5-202ENST00000439541 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.95□□□□□ -1.3
CBX5-202ENST00000439541 CFC1BP0CG36 223 aa6.95□□□□□ -1.3
CBX5-202ENST00000439541 CFC1P0CG37 223 aa6.95□□□□□ -1.3
CBX5-202ENST00000439541 AMELXQ99217 191 aa6.95□□□□□ -1.3
CBX5-202ENST00000439541 A0A0B4J2C4 111 aa6.94□□□□□ -1.3
CBX5-202ENST00000439541 TSPEAR-AS2P59090 65 aa6.94□□□□□ -1.3
CBX5-202ENST00000439541 GTSF1LQ9H1H1 148 aa6.94□□□□□ -1.3
CBX5-202ENST00000439541 IGLV4-3A0A075B6K6 122 aa6.94□□□□□ -1.3
CBX5-202ENST00000439541 TRAV10A0A0B4J240 114 aa6.94□□□□□ -1.3
CBX5-202ENST00000439541 M0QXV9 152 aa6.94□□□□□ -1.3
CBX5-202ENST00000439541 ZNF22P17026 224 aaPredicted RBP6.94□□□□□ -1.3
CBX5-202ENST00000439541 NTM-AS1Q6ZSK4 140 aa6.94□□□□□ -1.3
CBX5-202ENST00000439541 SCGB1C2P0DMR2 95 aa6.93□□□□□ -1.3
CBX5-202ENST00000439541 TEN1Q86WV5 123 aa6.93□□□□□ -1.3
CBX5-202ENST00000439541 PPDPFLQ8WWR9 84 aa6.93□□□□□ -1.3
CBX5-202ENST00000439541 ICOSQ9Y6W8 199 aa6.93□□□□□ -1.3
CBX5-202ENST00000439541 DNAH7Q8WXX0 4024 aa6.93□□□□□ -1.3
CBX5-202ENST00000439541 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.92□□□□□ -1.3
CBX5-202ENST00000439541 IGKV2-29A2NJV5 120 aaPredicted RBP6.92□□□□□ -1.3
CBX5-202ENST00000439541 MRPS36P82909 103 aaKnown RBP6.92□□□□□ -1.3
CBX5-202ENST00000439541 SMAGPQ0VAQ4 97 aa6.92□□□□□ -1.3
CBX5-202ENST00000439541 DAZ4Q86SG3 579 aaKnown RBP6.92□□□□□ -1.3
CBX5-202ENST00000439541 MTURNQ8N3F0 131 aa6.92□□□□□ -1.3
CBX5-202ENST00000439541 CHCHD7Q9BUK0 85 aa6.92□□□□□ -1.3
CBX5-202ENST00000439541 DAZ3Q9NR90 486 aaKnown RBP6.92□□□□□ -1.3
CBX5-202ENST00000439541 SPANXA1Q9NS26 97 aa6.92□□□□□ -1.3
CBX5-202ENST00000439541 ERG28Q9UKR5 140 aa6.92□□□□□ -1.3
CBX5-202ENST00000439541 DYNC2H1Q8NCM8 4307 aaKnown RBP6.92□□□□□ -1.3
CBX5-202ENST00000439541 STARD9Q9P2P6 4700 aa6.92□□□□□ -1.3
CBX5-202ENST00000439541 A4D1N5 150 aa6.92□□□□□ -1.3
CBX5-202ENST00000439541 TCL1BO95988 128 aa6.92□□□□□ -1.3
CBX5-202ENST00000439541 SMCPP49901 116 aaPredicted RBP6.92□□□□□ -1.3
CBX5-202ENST00000439541 TIMM21Q9BVV7 248 aa6.92□□□□□ -1.3
CBX5-202ENST00000439541 CSMD3Q7Z407 3707 aa6.92□□□□□ -1.3
CBX5-202ENST00000439541 A0A0J9YXV3 536 aa6.91□□□□□ -1.3
CBX5-202ENST00000439541 OPRPNQ99935 248 aaPredicted RBP6.91□□□□□ -1.3
CBX5-202ENST00000439541 A0A1B0GV72 72 aa6.9□□□□□ -1.3
CBX5-202ENST00000439541 IGHV3-33P01772 117 aa6.9□□□□□ -1.3
CBX5-202ENST00000439541 MRPL23Q16540 153 aaKnown RBP6.9□□□□□ -1.3
CBX5-202ENST00000439541 CEMP1Q6PRD7 247 aaPredicted RBP6.9□□□□□ -1.3
CBX5-202ENST00000439541 TGP01266 2768 aa6.9□□□□□ -1.31
CBX5-202ENST00000439541 TRBV6-8A0A0A6YYG3 113 aa6.9□□□□□ -1.31
CBX5-202ENST00000439541 IGHV1-58A0A0C4DH39 117 aa6.9□□□□□ -1.31
CBX5-202ENST00000439541 A0A0J9YXY3 114 aa6.9□□□□□ -1.31
CBX5-202ENST00000439541 TINCRA0A1B0GVN0 87 aa6.9□□□□□ -1.31
CBX5-202ENST00000439541 TMEM262E9PQX1 116 aa6.9□□□□□ -1.31
CBX5-202ENST00000439541 IGHV3-30-3P0DP02 117 aa6.9□□□□□ -1.31
CBX5-202ENST00000439541 SFTA2Q6UW10 78 aa6.9□□□□□ -1.31
CBX5-202ENST00000439541 MUSTN1Q8IVN3 82 aa6.9□□□□□ -1.31
CBX5-202ENST00000439541 PLECQ15149 4684 aaKnown RBP6.89□□□□□ -1.31
CBX5-202ENST00000439541 H3BNG1 76 aa6.89□□□□□ -1.31
CBX5-202ENST00000439541 ATXN8Q156A1 80 aa6.89□□□□□ -1.31
CBX5-202ENST00000439541 ZFAND6Q6FIF0 208 aa6.88□□□□□ -1.31
CBX5-202ENST00000439541 Q8N3U1 123 aa6.88□□□□□ -1.31
CBX5-202ENST00000439541 LYSTQ99698 3801 aa6.88□□□□□ -1.31
CBX5-202ENST00000439541 TMEM243Q9BU79 118 aa6.88□□□□□ -1.31
CBX5-202ENST00000439541 SPANXDQ9BXN6 97 aa6.88□□□□□ -1.31
CBX5-202ENST00000439541 SPANXCQ9NY87 97 aa6.88□□□□□ -1.31
CBX5-202ENST00000439541 IGHV3-64A0A075B6Q5 118 aa6.87□□□□□ -1.31
CBX5-202ENST00000439541 TRBV30A0A0K0K1B3 111 aa6.87□□□□□ -1.31
CBX5-202ENST00000439541 SLC25A20O43772 301 aa6.87□□□□□ -1.31
CBX5-202ENST00000439541 GAGE6Q13070 117 aa6.87□□□□□ -1.31
CBX5-202ENST00000439541 Q1RN00 199 aa6.87□□□□□ -1.31
CBX5-202ENST00000439541 RNASE13Q5GAN3 156 aaKnown RBP6.87□□□□□ -1.31
CBX5-202ENST00000439541 CHCHD5Q9BSY4 110 aa6.87□□□□□ -1.31
CBX5-202ENST00000439541 UBE2D4Q9Y2X8 147 aa6.87□□□□□ -1.31
CBX5-202ENST00000439541 TIMM17BO60830 172 aa6.87□□□□□ -1.31
CBX5-202ENST00000439541 ESRGQ1W209 222 aa6.87□□□□□ -1.31
CBX5-202ENST00000439541 LYPD5Q6UWN5 251 aa6.87□□□□□ -1.31
CBX5-202ENST00000439541 LINC01600Q96MT4 127 aa6.87□□□□□ -1.31
CBX5-202ENST00000439541 COX6CP09669 75 aa6.86□□□□□ -1.31
CBX5-202ENST00000439541 IFITM1P13164 125 aa6.86□□□□□ -1.31
CBX5-202ENST00000439541 Q6ZUT4 128 aa6.86□□□□□ -1.31
CBX5-202ENST00000439541 ANKRD29Q8N6D5 301 aa6.86□□□□□ -1.31
CBX5-202ENST00000439541 CDIP1Q9H305 208 aa6.86□□□□□ -1.31
CBX5-202ENST00000439541 GEMIN7Q9H840 131 aaKnown RBP6.86□□□□□ -1.31
CBX5-202ENST00000439541 NDUFA12Q9UI09 145 aa6.86□□□□□ -1.31
CBX5-202ENST00000439541 UBE2L6O14933 153 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 90.6 ms