RNA–Protein interactions for RNA: ENST00000439247.2

PCNX3-202, Transcript of pecanex 3, humanhuman

TSL 1 (best)

Gene PCNX3, Length 3,104 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3-202ENST00000439247 TIRAPP58753 221 aa9.73□□□□□ -0.85
PCNX3-202ENST00000439247 BEAN1Q3B7T3 259 aa9.73□□□□□ -0.85
PCNX3-202ENST00000439247 C9orf129Q5T035 196 aaKnown RBP9.73□□□□□ -0.85
PCNX3-202ENST00000439247 TIMM17BO60830 172 aa9.73□□□□□ -0.85
PCNX3-202ENST00000439247 GAGE2AQ6NT46 116 aa9.73□□□□□ -0.85
PCNX3-202ENST00000439247 MTORP42345 2549 aa9.72□□□□□ -0.85
PCNX3-202ENST00000439247 PRIMA1Q86XR5 153 aa9.72□□□□□ -0.85
PCNX3-202ENST00000439247 SETXQ7Z333 2677 aaKnown RBP9.72□□□□□ -0.85
PCNX3-202ENST00000439247 WNK1Q9H4A3 2382 aa9.72□□□□□ -0.85
PCNX3-202ENST00000439247 SMIM1B2RUZ4 78 aa9.71□□□□□ -0.85
PCNX3-202ENST00000439247 SLURP1P55000 103 aa9.71□□□□□ -0.85
PCNX3-202ENST00000439247 NF1P21359 2839 aa9.71□□□□□ -0.86
PCNX3-202ENST00000439247 DEFB112Q30KQ8 113 aa9.71□□□□□ -0.86
PCNX3-202ENST00000439247 IGLV5-45A0A087WSX0 123 aa9.7□□□□□ -0.86
PCNX3-202ENST00000439247 IGHV3-53P01767 116 aa9.7□□□□□ -0.86
PCNX3-202ENST00000439247 EDA2RQ9HAV5 297 aa9.7□□□□□ -0.86
PCNX3-202ENST00000439247 LINC00643Q86TS7 51 aa9.7□□□□□ -0.86
PCNX3-202ENST00000439247 C3orf22Q8N5N4 141 aa9.7□□□□□ -0.86
PCNX3-202ENST00000439247 IGLV5-39A0A0G2JS06 123 aa9.69□□□□□ -0.86
PCNX3-202ENST00000439247 CYSTM1Q9H1C7 97 aa9.69□□□□□ -0.86
PCNX3-202ENST00000439247 TMEM126AQ9H061 195 aa9.69□□□□□ -0.86
PCNX3-202ENST00000439247 HERVK_113P63121 156 aa9.69□□□□□ -0.86
PCNX3-202ENST00000439247 C11orf72Q8NBR9 251 aa9.69□□□□□ -0.86
PCNX3-202ENST00000439247 SMR3AQ99954 134 aa9.69□□□□□ -0.86
PCNX3-202ENST00000439247 ACYP1P07311 99 aa9.68□□□□□ -0.86
PCNX3-202ENST00000439247 KRTAP1-1Q07627 177 aa9.68□□□□□ -0.86
PCNX3-202ENST00000439247 ZNF415Q09FC8 603 aa9.68□□□□□ -0.86
PCNX3-202ENST00000439247 SDIM1Q6ZPB5 146 aa9.68□□□□□ -0.86
PCNX3-202ENST00000439247 BAHCC1Q9P281 2608 aa9.67□□□□□ -0.86
PCNX3-202ENST00000439247 NTM-AS1Q6ZSK4 140 aa9.67□□□□□ -0.86
PCNX3-202ENST00000439247 IMUPQ9GZP8 106 aa9.67□□□□□ -0.86
PCNX3-202ENST00000439247 J3QLI3 93 aa9.67□□□□□ -0.86
PCNX3-202ENST00000439247 XCL2Q9UBD3 114 aa9.67□□□□□ -0.86
PCNX3-202ENST00000439247 HIVEP1P15822 2718 aa9.66□□□□□ -0.86
PCNX3-202ENST00000439247 JMJD1CQ15652 2540 aa9.66□□□□□ -0.86
PCNX3-202ENST00000439247 IGKV3OR2-268A0A0C4DH90 116 aa9.66□□□□□ -0.86
PCNX3-202ENST00000439247 FSHBP01225 129 aa9.66□□□□□ -0.86
PCNX3-202ENST00000439247 A0A087WYN8 130 aa9.66□□□□□ -0.86
PCNX3-202ENST00000439247 IGKV3D-7A0A0C4DH55 119 aa9.66□□□□□ -0.86
PCNX3-202ENST00000439247 ATP5G1P05496 136 aa9.66□□□□□ -0.86
PCNX3-202ENST00000439247 LINC00337Q8N6G1 96 aa9.66□□□□□ -0.86
PCNX3-202ENST00000439247 UBE2E2Q96LR5 201 aa9.66□□□□□ -0.86
PCNX3-202ENST00000439247 TRACP01848 142 aa9.65□□□□□ -0.86
PCNX3-202ENST00000439247 C14orf132Q9NPU4 83 aa9.65□□□□□ -0.86
PCNX3-202ENST00000439247 TMEM89A2RUT3 159 aa9.65□□□□□ -0.86
PCNX3-202ENST00000439247 F5H768 121 aa9.65□□□□□ -0.87
PCNX3-202ENST00000439247 UQCRQO14949 82 aa9.65□□□□□ -0.87
PCNX3-202ENST00000439247 A0A087WVE0 104 aa9.64□□□□□ -0.87
PCNX3-202ENST00000439247 C5orf38Q86SI9 138 aa9.64□□□□□ -0.87
PCNX3-202ENST00000439247 TOMM7Q9P0U1 55 aa9.64□□□□□ -0.87
PCNX3-202ENST00000439247 PEMTQ9UBM1 199 aa9.64□□□□□ -0.87
PCNX3-202ENST00000439247 TRGV1A0A0A0MS02 117 aa9.64□□□□□ -0.87
PCNX3-202ENST00000439247 hADV29S1A0JD25 119 aa9.64□□□□□ -0.87
PCNX3-202ENST00000439247 MALP21145 153 aa9.64□□□□□ -0.87
PCNX3-202ENST00000439247 RNF152Q8N8N0 203 aa9.64□□□□□ -0.87
PCNX3-202ENST00000439247 IGKV2-28A0A075B6P5 120 aa9.63□□□□□ -0.87
PCNX3-202ENST00000439247 IGKV2D-28P01615 120 aa9.63□□□□□ -0.87
PCNX3-202ENST00000439247 LINC00526Q96FQ7 95 aa9.63□□□□□ -0.87
PCNX3-202ENST00000439247 C2orf48Q96LS8 159 aa9.63□□□□□ -0.87
PCNX3-202ENST00000439247 MIR7-3HGQ8N6C7 128 aa9.63□□□□□ -0.87
PCNX3-202ENST00000439247 SETD2Q9BYW2 2564 aaPredicted RBP9.63□□□□□ -0.87
PCNX3-202ENST00000439247 SLPIP03973 132 aa9.62□□□□□ -0.87
PCNX3-202ENST00000439247 DNAJC30Q96LL9 226 aa9.62□□□□□ -0.87
PCNX3-202ENST00000439247 MAP6D1Q9H9H5 199 aa9.62□□□□□ -0.87
PCNX3-202ENST00000439247 COX7CP15954 63 aa9.61□□□□□ -0.87
PCNX3-202ENST00000439247 Q6ZTI0 123 aa9.61□□□□□ -0.87
PCNX3-202ENST00000439247 SMIM11BQ8TCY0 68 aa9.61□□□□□ -0.87
PCNX3-202ENST00000439247 KHDC1LQ5JSQ8 128 aa9.6□□□□□ -0.87
PCNX3-202ENST00000439247 CDC42SE2Q9NRR3 84 aa9.6□□□□□ -0.87
PCNX3-202ENST00000439247 CRPP02741 224 aa9.6□□□□□ -0.87
PCNX3-202ENST00000439247 TRAV25A0A0B4J276 109 aa9.6□□□□□ -0.87
PCNX3-202ENST00000439247 LOC100131303A0A0U1RQF7 123 aa9.6□□□□□ -0.87
PCNX3-202ENST00000439247 NCR3O14931 201 aa9.6□□□□□ -0.87
PCNX3-202ENST00000439247 SND1-IT1Q9HBX3 110 aa9.6□□□□□ -0.87
PCNX3-202ENST00000439247 LINC00846Q9NV44 126 aa9.6□□□□□ -0.87
PCNX3-202ENST00000439247 CSDC2Q9Y534 153 aaKnown RBP9.6□□□□□ -0.87
PCNX3-202ENST00000439247 HIVEP2P31629 2446 aa9.6□□□□□ -0.87
PCNX3-202ENST00000439247 Q6YL49 198 aa9.59□□□□□ -0.87
PCNX3-202ENST00000439247 DNAL4O96015 105 aa9.58□□□□□ -0.88
PCNX3-202ENST00000439247 KIR2DL5BQ8NHK3 375 aa9.58□□□□□ -0.88
PCNX3-202ENST00000439247 INAFM2P0DMQ5 153 aa9.58□□□□□ -0.88
PCNX3-202ENST00000439247 PFN2P35080 140 aa9.58□□□□□ -0.88
PCNX3-202ENST00000439247 RPL28P46779 137 aaKnown RBP9.58□□□□□ -0.88
PCNX3-202ENST00000439247 LINC00158P58513 81 aa9.58□□□□□ -0.88
PCNX3-202ENST00000439247 C11orf68Q9H3H3 251 aaKnown RBP9.58□□□□□ -0.88
PCNX3-202ENST00000439247 ZNF702PQ9H963 129 aa9.58□□□□□ -0.88
PCNX3-202ENST00000439247 INSP01308 110 aa9.58□□□□□ -0.88
PCNX3-202ENST00000439247 FAM222AQ5U5X8 452 aa9.58□□□□□ -0.88
PCNX3-202ENST00000439247 FAM19A5Q7Z5A7 132 aaPredicted RBP9.58□□□□□ -0.88
PCNX3-202ENST00000439247 NSD1Q96L73 2696 aaPredicted RBP9.58□□□□□ -0.88
PCNX3-202ENST00000439247 A0A1B0GX51 115 aa9.57□□□□□ -0.88
PCNX3-202ENST00000439247 A8MTW9 85 aa9.57□□□□□ -0.88
PCNX3-202ENST00000439247 LECT2O14960 151 aa9.57□□□□□ -0.88
PCNX3-202ENST00000439247 CXCL5P42830 114 aa9.57□□□□□ -0.88
PCNX3-202ENST00000439247 CYSRT1A8MQ03 144 aa9.57□□□□□ -0.88
PCNX3-202ENST00000439247 C1orf158Q8N1D5 194 aa9.57□□□□□ -0.88
PCNX3-202ENST00000439247 HIST1H4AP62805 103 aaKnown RBP9.56□□□□□ -0.88
PCNX3-202ENST00000439247 RPL36AP83881 106 aaKnown RBP9.56□□□□□ -0.88
PCNX3-202ENST00000439247 RPL36ALQ969Q0 106 aaKnown RBP9.56□□□□□ -0.88
PCNX3-202ENST00000439247 TRAV13-2A0A0B4J235 113 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms