RNA–Protein interactions for RNA: ENST00000439235.5

CHD3-204, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,263 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-204ENST00000439235 C11orf86A6NJI1 115 aa13.88□□□□□ -0.19
CHD3-204ENST00000439235 JOSD1Q15040 202 aaPredicted RBP13.88□□□□□ -0.19
CHD3-204ENST00000439235 CD164L2Q6UWJ8 174 aa13.88□□□□□ -0.19
CHD3-204ENST00000439235 LINC00469Q8N7U9 141 aa13.87□□□□□ -0.19
CHD3-204ENST00000439235 COX11Q9Y6N1 276 aa13.87□□□□□ -0.19
CHD3-204ENST00000439235 ALMS1Q8TCU4 4167 aa13.86□□□□□ -0.19
CHD3-204ENST00000439235 IGLV5-45A0A087WSX0 123 aa13.86□□□□□ -0.19
CHD3-204ENST00000439235 GAGE12HA6NDE8 117 aa13.86□□□□□ -0.19
CHD3-204ENST00000439235 M0R2N4 97 aa13.86□□□□□ -0.19
CHD3-204ENST00000439235 Q6ZR54 194 aa13.86□□□□□ -0.19
CHD3-204ENST00000439235 TM2D2Q9BX73 214 aa13.86□□□□□ -0.19
CHD3-204ENST00000439235 TENM2Q9NT68 2774 aa13.86□□□□□ -0.19
CHD3-204ENST00000439235 LCE6AA0A183 80 aa13.85□□□□□ -0.19
CHD3-204ENST00000439235 H3BRM9 83 aa13.85□□□□□ -0.19
CHD3-204ENST00000439235 ZNF22P17026 224 aaPredicted RBP13.85□□□□□ -0.19
CHD3-204ENST00000439235 COX6A2Q02221 97 aa13.85□□□□□ -0.19
CHD3-204ENST00000439235 TMEM170BQ5T4T1 132 aa13.85□□□□□ -0.19
CHD3-204ENST00000439235 IGHV3OR16-9A0A0B4J2B5 98 aa13.84□□□□□ -0.19
CHD3-204ENST00000439235 FOXI1Q12951 378 aa13.84□□□□□ -0.19
CHD3-204ENST00000439235 CDKN2A-AS1Q9UH64 79 aa13.83□□□□□ -0.2
CHD3-204ENST00000439235 COX7A2LO14548 114 aa13.82□□□□□ -0.2
CHD3-204ENST00000439235 KRTAP26-1Q6PEX3 210 aa13.82□□□□□ -0.2
CHD3-204ENST00000439235 VPS13DQ5THJ4 4388 aa13.82□□□□□ -0.2
CHD3-204ENST00000439235 A0A087WZ39 114 aa13.81□□□□□ -0.2
CHD3-204ENST00000439235 PYY3Q5JQD4 70 aa13.81□□□□□ -0.2
CHD3-204ENST00000439235 C5orf38Q86SI9 138 aa13.81□□□□□ -0.2
CHD3-204ENST00000439235 ATOH7Q8N100 152 aa13.81□□□□□ -0.2
CHD3-204ENST00000439235 LINC01561Q8N1V8 128 aa13.81□□□□□ -0.2
CHD3-204ENST00000439235 MALP21145 153 aa13.8□□□□□ -0.2
CHD3-204ENST00000439235 HERVK_113P61574 105 aa13.8□□□□□ -0.2
CHD3-204ENST00000439235 C6orf223Q8N319 242 aa13.8□□□□□ -0.2
CHD3-204ENST00000439235 PSCAO43653 123 aa13.79□□□□□ -0.2
CHD3-204ENST00000439235 TMEM223A0PJW6 202 aa13.77□□□□□ -0.21
CHD3-204ENST00000439235 HSBP1L1C9JCN9 74 aa13.77□□□□□ -0.21
CHD3-204ENST00000439235 APOMO95445 188 aa13.77□□□□□ -0.21
CHD3-204ENST00000439235 LYSTQ99698 3801 aa13.76□□□□□ -0.21
CHD3-204ENST00000439235 SMIM1B2RUZ4 78 aa13.76□□□□□ -0.21
CHD3-204ENST00000439235 SPINK8P0C7L1 97 aa13.76□□□□□ -0.21
CHD3-204ENST00000439235 C1orf134Q5TEV5 83 aa13.76□□□□□ -0.21
CHD3-204ENST00000439235 SMIM6P0DI80 62 aa13.75□□□□□ -0.21
CHD3-204ENST00000439235 EPPK1P58107 5090 aaKnown RBP13.75□□□□□ -0.21
CHD3-204ENST00000439235 DNAH1Q9P2D7 4330 aa13.75□□□□□ -0.21
CHD3-204ENST00000439235 BIRC6Q9NR09 4857 aa13.74□□□□□ -0.21
CHD3-204ENST00000439235 IGHV1-58A0A0C4DH39 117 aa13.74□□□□□ -0.21
CHD3-204ENST00000439235 CFAP161Q6P656 301 aa13.74□□□□□ -0.21
CHD3-204ENST00000439235 Q6ZRN7 208 aaPredicted RBP13.74□□□□□ -0.21
CHD3-204ENST00000439235 hDV102S1A0JD36 115 aa13.73□□□□□ -0.21
CHD3-204ENST00000439235 STPG4Q8N801 248 aa13.73□□□□□ -0.21
CHD3-204ENST00000439235 IGHV3-64A0A075B6Q5 118 aa13.72□□□□□ -0.21
CHD3-204ENST00000439235 IGLV5-39A0A0G2JS06 123 aa13.72□□□□□ -0.21
CHD3-204ENST00000439235 ORAOV1Q8WV07 137 aa13.72□□□□□ -0.21
CHD3-204ENST00000439235 VAMP8Q9BV40 100 aa13.72□□□□□ -0.21
CHD3-204ENST00000439235 E9PLD3 99 aa13.71□□□□□ -0.21
CHD3-204ENST00000439235 MAPKAPK5-AS1Q8N8E1 139 aa13.71□□□□□ -0.21
CHD3-204ENST00000439235 PLEKHB2Q96CS7 222 aa13.7□□□□□ -0.22
CHD3-204ENST00000439235 USP17L23D6RBM5 183 aa13.69□□□□□ -0.22
CHD3-204ENST00000439235 LEPROTO15243 131 aa13.69□□□□□ -0.22
CHD3-204ENST00000439235 PRSS2P07478 247 aa13.69□□□□□ -0.22
CHD3-204ENST00000439235 MAJINQ3KP22 176 aa13.69□□□□□ -0.22
CHD3-204ENST00000439235 C15orf56Q8N910 161 aa13.69□□□□□ -0.22
CHD3-204ENST00000439235 TOMM7Q9P0U1 55 aa13.69□□□□□ -0.22
CHD3-204ENST00000439235 DNAH6Q9C0G6 4158 aa13.69□□□□□ -0.22
CHD3-204ENST00000439235 S100A12P80511 92 aa13.68□□□□□ -0.22
CHD3-204ENST00000439235 SPAG11BQ08648 103 aa13.68□□□□□ -0.22
CHD3-204ENST00000439235 ANKRD39Q53RE8 183 aa13.68□□□□□ -0.22
CHD3-204ENST00000439235 Q8IZM0 81 aa13.68□□□□□ -0.22
CHD3-204ENST00000439235 COX7B2Q8TF08 81 aa13.68□□□□□ -0.22
CHD3-204ENST00000439235 GVQW2A0A096LPI5 108 aaPredicted RBP13.67□□□□□ -0.22
CHD3-204ENST00000439235 C14orf177Q52M58 125 aa13.67□□□□□ -0.22
CHD3-204ENST00000439235 CDPF1Q6NVV7 123 aa13.67□□□□□ -0.22
CHD3-204ENST00000439235 PAM16Q9Y3D7 125 aa13.67□□□□□ -0.22
CHD3-204ENST00000439235 RYR2Q92736 4967 aa13.66□□□□□ -0.22
CHD3-204ENST00000439235 J3QQQ9 107 aa13.65□□□□□ -0.22
CHD3-204ENST00000439235 ZNF561-AS1K7EIQ3 104 aa13.65□□□□□ -0.22
CHD3-204ENST00000439235 LGALS3P17931 250 aaKnown RBP13.65□□□□□ -0.22
CHD3-204ENST00000439235 NMUP48645 174 aa13.65□□□□□ -0.22
CHD3-204ENST00000439235 HIGD2BQ4VC39 106 aa13.65□□□□□ -0.22
CHD3-204ENST00000439235 SPATA45Q537H7 98 aa13.65□□□□□ -0.22
CHD3-204ENST00000439235 KRTAP17-1Q9BYP8 105 aa13.65□□□□□ -0.22
CHD3-204ENST00000439235 LECT2O14960 151 aa13.64□□□□□ -0.23
CHD3-204ENST00000439235 CXCL5P42830 114 aa13.64□□□□□ -0.23
CHD3-204ENST00000439235 C6orf226Q5I0X4 101 aa13.64□□□□□ -0.23
CHD3-204ENST00000439235 IGKV2D-26A0A0A0MRZ7 120 aa13.63□□□□□ -0.23
CHD3-204ENST00000439235 LRCOL1A6NCL2 159 aa13.63□□□□□ -0.23
CHD3-204ENST00000439235 SACSQ9NZJ4 4579 aa13.62□□□□□ -0.23
CHD3-204ENST00000439235 TSPEAR-AS2P59090 65 aa13.62□□□□□ -0.23
CHD3-204ENST00000439235 WFDC2Q14508 124 aa13.62□□□□□ -0.23
CHD3-204ENST00000439235 KIAA0087Q14695 138 aa13.62□□□□□ -0.23
CHD3-204ENST00000439235 SFTA2Q6UW10 78 aa13.62□□□□□ -0.23
CHD3-204ENST00000439235 F8WDY8 70 aa13.61□□□□□ -0.23
CHD3-204ENST00000439235 RTL8CO15255 209 aa13.61□□□□□ -0.23
CHD3-204ENST00000439235 CKS1BP61024 79 aa13.61□□□□□ -0.23
CHD3-204ENST00000439235 C2orf48Q96LS8 159 aa13.61□□□□□ -0.23
CHD3-204ENST00000439235 NTN5Q8WTR8 489 aaPredicted RBP13.6□□□□□ -0.23
CHD3-204ENST00000439235 C12orf57Q99622 126 aa13.6□□□□□ -0.23
CHD3-204ENST00000439235 NDUFA12Q9UI09 145 aa13.6□□□□□ -0.23
CHD3-204ENST00000439235 A0A087WTM6 91 aa13.59□□□□□ -0.23
CHD3-204ENST00000439235 MYMXA0A1B0GTQ4 84 aa13.58□□□□□ -0.24
CHD3-204ENST00000439235 EREGO14944 169 aa13.58□□□□□ -0.24
CHD3-204ENST00000439235 NDUFA1O15239 70 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 162.2 ms