RNA–Protein interactions for RNA: ENST00000439211.6

DHFR-201, Transcript of dihydrofolate reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DHFR, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-201ENST00000439211 LINC01600Q96MT4 127 aa11.54□□□□□ -0.56
DHFR-201ENST00000439211 MUC4Q99102 2169 aa11.54□□□□□ -0.56
DHFR-201ENST00000439211 FN1P02751 2386 aaKnown RBP11.54□□□□□ -0.56
DHFR-201ENST00000439211 SMIM26A0A096LP01 95 aa11.54□□□□□ -0.56
DHFR-201ENST00000439211 NCR3O14931 201 aa11.54□□□□□ -0.56
DHFR-201ENST00000439211 ENHOQ6UWT2 76 aa11.54□□□□□ -0.56
DHFR-201ENST00000439211 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.53□□□□□ -0.56
DHFR-201ENST00000439211 IGKV2-29A2NJV5 120 aaPredicted RBP11.53□□□□□ -0.56
DHFR-201ENST00000439211 KLLNB2CW77 178 aa11.53□□□□□ -0.56
DHFR-201ENST00000439211 UBL5Q9BZL1 73 aa11.53□□□□□ -0.56
DHFR-201ENST00000439211 LECT2O14960 151 aa11.53□□□□□ -0.56
DHFR-201ENST00000439211 OVOL2Q9BRP0 275 aa11.53□□□□□ -0.56
DHFR-201ENST00000439211 MTORP42345 2549 aa11.52□□□□□ -0.56
DHFR-201ENST00000439211 A0A1W2PRX2 142 aa11.52□□□□□ -0.56
DHFR-201ENST00000439211 PRB1P04280 392 aa11.52□□□□□ -0.56
DHFR-201ENST00000439211 HIST2H2BDQ6DRA6 164 aa11.52□□□□□ -0.56
DHFR-201ENST00000439211 RNF223E7ERA6 249 aa11.52□□□□□ -0.57
DHFR-201ENST00000439211 K7EMT4 169 aa11.52□□□□□ -0.57
DHFR-201ENST00000439211 XCL1P47992 114 aa11.52□□□□□ -0.57
DHFR-201ENST00000439211 HAMPP81172 84 aa11.52□□□□□ -0.57
DHFR-201ENST00000439211 XCL2Q9UBD3 114 aa11.52□□□□□ -0.57
DHFR-201ENST00000439211 C19orf54Q5BKX5 351 aa11.52□□□□□ -0.57
DHFR-201ENST00000439211 CDKN2A-AS1Q9UH64 79 aa11.52□□□□□ -0.57
DHFR-201ENST00000439211 PROK1P58294 105 aa11.51□□□□□ -0.57
DHFR-201ENST00000439211 Q8N2B8 174 aa11.51□□□□□ -0.57
DHFR-201ENST00000439211 ZNF462Q96JM2 2506 aa11.51□□□□□ -0.57
DHFR-201ENST00000439211 CELSR1Q9NYQ6 3014 aa11.51□□□□□ -0.57
DHFR-201ENST00000439211 IGKV3OR2-268A0A0C4DH90 116 aa11.51□□□□□ -0.57
DHFR-201ENST00000439211 M0QY20 66 aa11.51□□□□□ -0.57
DHFR-201ENST00000439211 SLURP1P55000 103 aa11.51□□□□□ -0.57
DHFR-201ENST00000439211 LINC00158P58513 81 aa11.51□□□□□ -0.57
DHFR-201ENST00000439211 RPL36AP83881 106 aaKnown RBP11.51□□□□□ -0.57
DHFR-201ENST00000439211 RPL36ALQ969Q0 106 aaKnown RBP11.51□□□□□ -0.57
DHFR-201ENST00000439211 UBE2E2Q96LR5 201 aa11.51□□□□□ -0.57
DHFR-201ENST00000439211 LITAFQ99732 161 aa11.5□□□□□ -0.57
DHFR-201ENST00000439211 IGHV3-53P01767 116 aa11.5□□□□□ -0.57
DHFR-201ENST00000439211 PIK3CD-AS1Q5SR53 167 aa11.5□□□□□ -0.57
DHFR-201ENST00000439211 TRAV13-2A0A0B4J235 113 aa11.5□□□□□ -0.57
DHFR-201ENST00000439211 SLPIP03973 132 aa11.5□□□□□ -0.57
DHFR-201ENST00000439211 LINC01356Q8N9X3 169 aa11.5□□□□□ -0.57
DHFR-201ENST00000439211 NDUFC2-KCTD14E9PQ53 114 aa11.49□□□□□ -0.57
DHFR-201ENST00000439211 TIMM17BO60830 172 aa11.49□□□□□ -0.57
DHFR-201ENST00000439211 HIST2H2BCQ6DN03 193 aa11.49□□□□□ -0.57
DHFR-201ENST00000439211 PAX4O43316 350 aa11.49□□□□□ -0.57
DHFR-201ENST00000439211 IGLV1-40P01703 118 aa11.49□□□□□ -0.57
DHFR-201ENST00000439211 LINC01561Q8N1V8 128 aa11.49□□□□□ -0.57
DHFR-201ENST00000439211 EPG5Q9HCE0 2579 aa11.48□□□□□ -0.57
DHFR-201ENST00000439211 APRG1Q8IVJ8 170 aa11.48□□□□□ -0.57
DHFR-201ENST00000439211 TMEM86BQ8N661 226 aa11.48□□□□□ -0.57
DHFR-201ENST00000439211 FAM19A1Q7Z5A9 133 aa11.48□□□□□ -0.57
DHFR-201ENST00000439211 KIF25-AS1Q9Y6Z4 181 aa11.48□□□□□ -0.57
DHFR-201ENST00000439211 LINC00315P59091 139 aa11.48□□□□□ -0.57
DHFR-201ENST00000439211 K7EQG2 157 aa11.47□□□□□ -0.57
DHFR-201ENST00000439211 FLNCQ14315 2725 aa11.47□□□□□ -0.57
DHFR-201ENST00000439211 FAM222AQ5U5X8 452 aa11.47□□□□□ -0.57
DHFR-201ENST00000439211 UPK3BQ9BT76 320 aa11.47□□□□□ -0.57
DHFR-201ENST00000439211 FAM218AQ96MZ4 157 aa11.47□□□□□ -0.57
DHFR-201ENST00000439211 F8WEM9 126 aa11.46□□□□□ -0.57
DHFR-201ENST00000439211 C11orf68Q9H3H3 251 aaKnown RBP11.46□□□□□ -0.57
DHFR-201ENST00000439211 MRPS36P82909 103 aaKnown RBP11.46□□□□□ -0.58
DHFR-201ENST00000439211 SOSTDC1Q6X4U4 206 aa11.45□□□□□ -0.58
DHFR-201ENST00000439211 TRGV1A0A0A0MS02 117 aa11.45□□□□□ -0.58
DHFR-201ENST00000439211 TRBV6-5A0A0K0K1A5 114 aa11.45□□□□□ -0.58
DHFR-201ENST00000439211 SND1-IT1Q9HBX3 110 aa11.44□□□□□ -0.58
DHFR-201ENST00000439211 UBE2D4Q9Y2X8 147 aa11.44□□□□□ -0.58
DHFR-201ENST00000439211 BSNQ9UPA5 3926 aa11.44□□□□□ -0.58
DHFR-201ENST00000439211 ORMDL1Q9P0S3 153 aa11.43□□□□□ -0.58
DHFR-201ENST00000439211 ACANP16112 2415 aa11.43□□□□□ -0.58
DHFR-201ENST00000439211 RPL28P46779 137 aaKnown RBP11.43□□□□□ -0.58
DHFR-201ENST00000439211 NDUFA1O15239 70 aa11.43□□□□□ -0.58
DHFR-201ENST00000439211 KLK9Q2XQG4 91 aa11.43□□□□□ -0.58
DHFR-201ENST00000439211 STHQ8IWL8 128 aa11.42□□□□□ -0.58
DHFR-201ENST00000439211 DSCR9P59020 149 aa11.42□□□□□ -0.58
DHFR-201ENST00000439211 C18orf65Q6ZTR6 163 aa11.41□□□□□ -0.58
DHFR-201ENST00000439211 H0YGX0 51 aa11.41□□□□□ -0.58
DHFR-201ENST00000439211 RMI2Q96E14 147 aa11.41□□□□□ -0.58
DHFR-201ENST00000439211 LINC00474Q9P2X8 69 aa11.41□□□□□ -0.58
DHFR-201ENST00000439211 A0A087WYN8 130 aa11.4□□□□□ -0.58
DHFR-201ENST00000439211 UBE2L6O14933 153 aa11.4□□□□□ -0.59
DHFR-201ENST00000439211 CRYBG3Q68DQ2 2970 aa11.39□□□□□ -0.59
DHFR-201ENST00000439211 INSP01308 110 aa11.39□□□□□ -0.59
DHFR-201ENST00000439211 MIR7-3HGQ8N6C7 128 aa11.39□□□□□ -0.59
DHFR-201ENST00000439211 CFHR3Q02985 330 aa11.38□□□□□ -0.59
DHFR-201ENST00000439211 ZANQ9Y493 2812 aa11.38□□□□□ -0.59
DHFR-201ENST00000439211 TRBV7-6A0A0J9YX20 115 aa11.38□□□□□ -0.59
DHFR-201ENST00000439211 LAMTOR3Q9UHA4 124 aa11.38□□□□□ -0.59
DHFR-201ENST00000439211 TRGV2A0A075B6R0 118 aa11.38□□□□□ -0.59
DHFR-201ENST00000439211 SS18Q15532 418 aa11.38□□□□□ -0.59
DHFR-201ENST00000439211 IL17DQ8TAD2 202 aa11.38□□□□□ -0.59
DHFR-201ENST00000439211 RETNQ9HD89 108 aa11.38□□□□□ -0.59
DHFR-201ENST00000439211 Q9UF83 564 aa11.38□□□□□ -0.59
DHFR-201ENST00000439211 SMIM11BQ8TCY0 68 aa11.36□□□□□ -0.59
DHFR-201ENST00000439211 LINC00467Q9BRT7 94 aa11.36□□□□□ -0.59
DHFR-201ENST00000439211 ITPR1Q14643 2758 aa11.36□□□□□ -0.59
DHFR-201ENST00000439211 TRAV7A0A075B6U4 112 aa11.35□□□□□ -0.59
DHFR-201ENST00000439211 C9orf129Q5T035 196 aaKnown RBP11.35□□□□□ -0.59
DHFR-201ENST00000439211 ATP5EP2Q5VTU8 51 aa11.35□□□□□ -0.59
DHFR-201ENST00000439211 PF4P02776 101 aa11.34□□□□□ -0.59
DHFR-201ENST00000439211 JMJD7-PLA2G4BH0Y9G9 81 aa11.33□□□□□ -0.6
DHFR-201ENST00000439211 Q96MF0 132 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms