RNA–Protein interactions for RNA: ENST00000439185.1

UPP2-IT1-201, UPP2 intronic transcript 1, humanhuman

TSL 3 BASIC

Gene UPP2-IT1, Length 357 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPP2-IT1-201ENST00000439185 TNRC18O15417 2968 aaPredicted RBP-1.26□□□□□ -2.61
UPP2-IT1-201ENST00000439185 MAFIPQ8WZ33 124 aa-1.26□□□□□ -2.61
UPP2-IT1-201ENST00000439185 LSM10Q969L4 123 aaKnown RBP-1.26□□□□□ -2.61
UPP2-IT1-201ENST00000439185 MGST2Q99735 147 aa-1.26□□□□□ -2.61
UPP2-IT1-201ENST00000439185 FXYD6Q9H0Q3 95 aa-1.26□□□□□ -2.61
UPP2-IT1-201ENST00000439185 DYNLRB1Q9NP97 96 aa-1.26□□□□□ -2.61
UPP2-IT1-201ENST00000439185 SHANK2Q9UPX8 1470 aa-1.26□□□□□ -2.61
UPP2-IT1-201ENST00000439185 IQSEC2Q5JU85 1478 aa-1.27□□□□□ -2.61
UPP2-IT1-201ENST00000439185 RAPGEF6Q8TEU7 1601 aa-1.27□□□□□ -2.61
UPP2-IT1-201ENST00000439185 VPS13DQ5THJ4 4388 aa-1.27□□□□□ -2.61
UPP2-IT1-201ENST00000439185 PRRC2CQ9Y520 2896 aaKnown RBP-1.28□□□□□ -2.61
UPP2-IT1-201ENST00000439185 TRBV7-3A0A075B6L6 115 aa-1.28□□□□□ -2.61
UPP2-IT1-201ENST00000439185 SERP1Q9Y6X1 66 aa-1.28□□□□□ -2.61
UPP2-IT1-201ENST00000439185 NIPBLQ6KC79 2804 aaeCLIP-1.28□□□□□ -2.61
UPP2-IT1-201ENST00000439185 SPG11Q96JI7 2443 aa-1.29□□□□□ -2.62
UPP2-IT1-201ENST00000439185 ARPC4P59998 168 aa-1.29□□□□□ -2.62
UPP2-IT1-201ENST00000439185 PFDN5Q99471 154 aa-1.29□□□□□ -2.62
UPP2-IT1-201ENST00000439185 RERGLQ9H628 205 aa-1.29□□□□□ -2.62
UPP2-IT1-201ENST00000439185 AKAP9Q99996 3911 aa-1.29□□□□□ -2.62
UPP2-IT1-201ENST00000439185 ARHGEF12Q9NZN5 1544 aa-1.3□□□□□ -2.62
UPP2-IT1-201ENST00000439185 POLA1P09884 1462 aaPredicted RBP-1.3□□□□□ -2.62
UPP2-IT1-201ENST00000439185 PSME4Q14997 1843 aa-1.3□□□□□ -2.62
UPP2-IT1-201ENST00000439185 HMGN4O00479 90 aa-1.3□□□□□ -2.62
UPP2-IT1-201ENST00000439185 HTTP42858 3142 aa-1.3□□□□□ -2.62
UPP2-IT1-201ENST00000439185 BICRAQ9NZM4 1560 aa-1.3□□□□□ -2.62
UPP2-IT1-201ENST00000439185 NSD3Q9BZ95 1437 aa-1.31□□□□□ -2.62
UPP2-IT1-201ENST00000439185 DEFB105AQ8NG35 78 aa-1.31□□□□□ -2.62
UPP2-IT1-201ENST00000439185 TSLPQ969D9 159 aa-1.31□□□□□ -2.62
UPP2-IT1-201ENST00000439185 SNRNP25Q9BV90 132 aaKnown RBP-1.31□□□□□ -2.62
UPP2-IT1-201ENST00000439185 TULP4Q9NRJ4 1543 aa-1.31□□□□□ -2.62
UPP2-IT1-201ENST00000439185 FAT3Q8TDW7 4589 aa-1.32□□□□□ -2.62
UPP2-IT1-201ENST00000439185 DNAH2Q9P225 4427 aa-1.32□□□□□ -2.62
UPP2-IT1-201ENST00000439185 LOC285095A0A1B0GVY8 99 aa-1.32□□□□□ -2.62
UPP2-IT1-201ENST00000439185 SFT2D2O95562 160 aa-1.32□□□□□ -2.62
UPP2-IT1-201ENST00000439185 PAIP2BQ9ULR5 123 aaKnown RBP-1.32□□□□□ -2.62
UPP2-IT1-201ENST00000439185 SPTBN4Q9H254 2564 aa-1.32□□□□□ -2.62
UPP2-IT1-201ENST00000439185 CUBNO60494 3623 aa-1.32□□□□□ -2.62
UPP2-IT1-201ENST00000439185 RNF213Q63HN8 5207 aa-1.32□□□□□ -2.62
UPP2-IT1-201ENST00000439185 LAMA1P25391 3075 aa-1.32□□□□□ -2.62
UPP2-IT1-201ENST00000439185 BTAF1O14981 1849 aa-1.33□□□□□ -2.62
UPP2-IT1-201ENST00000439185 ZFHX3Q15911 3703 aa-1.33□□□□□ -2.62
UPP2-IT1-201ENST00000439185 MYOM1P52179 1685 aa-1.34□□□□□ -2.62
UPP2-IT1-201ENST00000439185 TRBV7-4A0A0J9YYF1 115 aa-1.34□□□□□ -2.62
UPP2-IT1-201ENST00000439185 MGPP08493 103 aa-1.34□□□□□ -2.62
UPP2-IT1-201ENST00000439185 TMEM263Q8WUH6 116 aaKnown RBP-1.34□□□□□ -2.62
UPP2-IT1-201ENST00000439185 PPP3R2Q96LZ3 170 aa-1.34□□□□□ -2.62
UPP2-IT1-201ENST00000439185 NAA60Q9H7X0 242 aa-1.34□□□□□ -2.62
UPP2-IT1-201ENST00000439185 CPSF1Q10570 1443 aaKnown RBP-1.34□□□□□ -2.62
UPP2-IT1-201ENST00000439185 PKD1P98161 4303 aa-1.35□□□□□ -2.63
UPP2-IT1-201ENST00000439185 MRPL54Q6P161 138 aaKnown RBP-1.35□□□□□ -2.63
UPP2-IT1-201ENST00000439185 SPANXDQ9BXN6 97 aa-1.35□□□□□ -2.63
UPP2-IT1-201ENST00000439185 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-1.35□□□□□ -2.63
UPP2-IT1-201ENST00000439185 KIAA0556O60303 1618 aa-1.36□□□□□ -2.63
UPP2-IT1-201ENST00000439185 NBASA2RRP1 2371 aa-1.36□□□□□ -2.63
UPP2-IT1-201ENST00000439185 VPS13BQ7Z7G8 4022 aa-1.36□□□□□ -2.63
UPP2-IT1-201ENST00000439185 MYH7P12883 1935 aa-1.36□□□□□ -2.63
UPP2-IT1-201ENST00000439185 LAMA3Q16787 3333 aa-1.37□□□□□ -2.63
UPP2-IT1-201ENST00000439185 PLECQ15149 4684 aaKnown RBP-1.37□□□□□ -2.63
UPP2-IT1-201ENST00000439185 MEIG1Q5JSS6 88 aa-1.37□□□□□ -2.63
UPP2-IT1-201ENST00000439185 C10orf113Q5VZT2 155 aa-1.37□□□□□ -2.63
UPP2-IT1-201ENST00000439185 SPRR4Q96PI1 79 aa-1.37□□□□□ -2.63
UPP2-IT1-201ENST00000439185 TEP1Q99973 2627 aaKnown RBP-1.38□□□□□ -2.63
UPP2-IT1-201ENST00000439185 LINC00959A0A1B0GUT2 108 aa-1.38□□□□□ -2.63
UPP2-IT1-201ENST00000439185 LOC105371267A0A1B0GV96 52 aa-1.38□□□□□ -2.63
UPP2-IT1-201ENST00000439185 SPRR2FQ96RM1 72 aa-1.38□□□□□ -2.63
UPP2-IT1-201ENST00000439185 MAGI1Q96QZ7 1491 aaPredicted RBP-1.38□□□□□ -2.63
UPP2-IT1-201ENST00000439185 TCHHQ07283 1943 aa-1.38□□□□□ -2.63
UPP2-IT1-201ENST00000439185 AKAP13Q12802 2813 aa-1.39□□□□□ -2.63
UPP2-IT1-201ENST00000439185 PHLPP1O60346 1717 aa-1.39□□□□□ -2.63
UPP2-IT1-201ENST00000439185 MIF4GDA9UHW6 222 aaKnown RBP-1.39□□□□□ -2.63
UPP2-IT1-201ENST00000439185 SELENOWP63302 87 aa-1.39□□□□□ -2.63
UPP2-IT1-201ENST00000439185 Q56UQ5 140 aa-1.39□□□□□ -2.63
UPP2-IT1-201ENST00000439185 ARL11Q969Q4 196 aa-1.39□□□□□ -2.63
UPP2-IT1-201ENST00000439185 FAIMQ9NVQ4 179 aa-1.39□□□□□ -2.63
UPP2-IT1-201ENST00000439185 ARHGEF5Q12774 1597 aa-1.39□□□□□ -2.63
UPP2-IT1-201ENST00000439185 SHROOM2Q13796 1616 aa-1.4□□□□□ -2.63
UPP2-IT1-201ENST00000439185 FAM25AB3EWG3 89 aa-1.4□□□□□ -2.63
UPP2-IT1-201ENST00000439185 FAM25CB3EWG5 89 aa-1.4□□□□□ -2.63
UPP2-IT1-201ENST00000439185 FAM25GB3EWG6 89 aa-1.4□□□□□ -2.63
UPP2-IT1-201ENST00000439185 SYS1-DBNDD2H3BUS1 97 aa-1.4□□□□□ -2.63
UPP2-IT1-201ENST00000439185 SSSCA1O60232 199 aa-1.4□□□□□ -2.63
UPP2-IT1-201ENST00000439185 IGLC1P0CG04 106 aa-1.4□□□□□ -2.63
UPP2-IT1-201ENST00000439185 COX8AP10176 69 aa-1.4□□□□□ -2.63
UPP2-IT1-201ENST00000439185 BTG2P78543 158 aa-1.4□□□□□ -2.63
UPP2-IT1-201ENST00000439185 COMMD6Q7Z4G1 85 aa-1.4□□□□□ -2.63
UPP2-IT1-201ENST00000439185 LINC00470Q9BZP3 86 aa-1.4□□□□□ -2.63
UPP2-IT1-201ENST00000439185 NXT2Q9NPJ8 142 aaKnown RBP-1.4□□□□□ -2.63
UPP2-IT1-201ENST00000439185 SETBP1Q9Y6X0 1596 aa-1.4□□□□□ -2.63
UPP2-IT1-201ENST00000439185 DNAH9Q9NYC9 4486 aa-1.4□□□□□ -2.63
UPP2-IT1-201ENST00000439185 LYSTQ99698 3801 aa-1.4□□□□□ -2.63
UPP2-IT1-201ENST00000439185 DEFB135Q30KP9 77 aa-1.41□□□□□ -2.64
UPP2-IT1-201ENST00000439185 C8orf59Q8N0T1 100 aaPredicted RBP-1.41□□□□□ -2.64
UPP2-IT1-201ENST00000439185 USP9XQ93008 2570 aaPredicted RBP-1.41□□□□□ -2.64
UPP2-IT1-201ENST00000439185 FOCADQ5VW36 1801 aa-1.41□□□□□ -2.64
UPP2-IT1-201ENST00000439185 SMG6Q86US8 1419 aaKnown RBP-1.41□□□□□ -2.64
UPP2-IT1-201ENST00000439185 TEX15Q9BXT5 2789 aa-1.42□□□□□ -2.64
UPP2-IT1-201ENST00000439185 CHKB-CPT1BH3BT56 60 aa-1.42□□□□□ -2.64
UPP2-IT1-201ENST00000439185 CATR1Q13166 79 aa-1.42□□□□□ -2.64
UPP2-IT1-201ENST00000439185 WHAMMP3Q1A5X7 153 aa-1.42□□□□□ -2.64
UPP2-IT1-201ENST00000439185 C5orf38Q86SI9 138 aa-1.42□□□□□ -2.64
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms