RNA–Protein interactions for RNA: ENST00000438552.6

SNRPB-202, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SNRPB, Length 1,008 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-202ENST00000438552 PMCHL1Q16048 86 aa10.55□□□□□ -0.72
SNRPB-202ENST00000438552 SCGB3A1Q96QR1 104 aa10.55□□□□□ -0.72
SNRPB-202ENST00000438552 hDV102S1A0JD36 115 aa10.54□□□□□ -0.72
SNRPB-202ENST00000438552 C5orf52A6NGY3 159 aa10.54□□□□□ -0.72
SNRPB-202ENST00000438552 NPSP0C0P6 89 aa10.54□□□□□ -0.72
SNRPB-202ENST00000438552 KRTAP10-1P60331 282 aa10.54□□□□□ -0.72
SNRPB-202ENST00000438552 HIGD2BQ4VC39 106 aa10.54□□□□□ -0.72
SNRPB-202ENST00000438552 ERASQ7Z444 233 aa10.54□□□□□ -0.72
SNRPB-202ENST00000438552 AMELXQ99217 191 aa10.54□□□□□ -0.72
SNRPB-202ENST00000438552 C2orf88Q9BSF0 95 aa10.54□□□□□ -0.72
SNRPB-202ENST00000438552 GCSHP23434 173 aa10.53□□□□□ -0.72
SNRPB-202ENST00000438552 LINC01620Q4KN68 170 aa10.53□□□□□ -0.72
SNRPB-202ENST00000438552 VCX2Q9H322 139 aa10.53□□□□□ -0.72
SNRPB-202ENST00000438552 KIAA1109Q2LD37 5005 aa10.52□□□□□ -0.72
SNRPB-202ENST00000438552 LINC01549A6NIU2 74 aa10.52□□□□□ -0.73
SNRPB-202ENST00000438552 COX7A2LO14548 114 aa10.52□□□□□ -0.73
SNRPB-202ENST00000438552 HBDP02042 147 aa10.52□□□□□ -0.73
SNRPB-202ENST00000438552 UBE2D1P51668 147 aa10.52□□□□□ -0.73
SNRPB-202ENST00000438552 CFAP161Q6P656 301 aa10.52□□□□□ -0.73
SNRPB-202ENST00000438552 C5orf38Q86SI9 138 aa10.52□□□□□ -0.73
SNRPB-202ENST00000438552 APOBP04114 4563 aaKnown RBP10.51□□□□□ -0.73
SNRPB-202ENST00000438552 SNRPEP62304 92 aaKnown RBP10.51□□□□□ -0.73
SNRPB-202ENST00000438552 PAPPA-AS1Q5QFB9 102 aa10.51□□□□□ -0.73
SNRPB-202ENST00000438552 LINC00242Q5T6M2 205 aa10.51□□□□□ -0.73
SNRPB-202ENST00000438552 GVQW2A0A096LPI5 108 aaPredicted RBP10.5□□□□□ -0.73
SNRPB-202ENST00000438552 IGHV1-58A0A0C4DH39 117 aa10.5□□□□□ -0.73
SNRPB-202ENST00000438552 NUPR1O60356 82 aa10.5□□□□□ -0.73
SNRPB-202ENST00000438552 HSBP1O75506 76 aa10.5□□□□□ -0.73
SNRPB-202ENST00000438552 MALP21145 153 aa10.5□□□□□ -0.73
SNRPB-202ENST00000438552 HIST3H2BBQ8N257 126 aa10.5□□□□□ -0.73
SNRPB-202ENST00000438552 IGHV3OR16-9A0A0B4J2B5 98 aa10.49□□□□□ -0.73
SNRPB-202ENST00000438552 COX6A2Q02221 97 aa10.49□□□□□ -0.73
SNRPB-202ENST00000438552 PACRGQ96M98 296 aaPredicted RBP10.49□□□□□ -0.73
SNRPB-202ENST00000438552 HERC2O95714 4834 aa10.49□□□□□ -0.73
SNRPB-202ENST00000438552 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.48□□□□□ -0.73
SNRPB-202ENST00000438552 CNBPP62633 177 aaKnown RBP10.48□□□□□ -0.73
SNRPB-202ENST00000438552 PDZD11Q5EBL8 140 aa10.48□□□□□ -0.73
SNRPB-202ENST00000438552 LINC00526Q96FQ7 95 aa10.48□□□□□ -0.73
SNRPB-202ENST00000438552 RYR1P21817 5038 aa10.48□□□□□ -0.73
SNRPB-202ENST00000438552 SLPIP03973 132 aa10.47□□□□□ -0.73
SNRPB-202ENST00000438552 S100A2P29034 98 aa10.46□□□□□ -0.73
SNRPB-202ENST00000438552 DNAH8Q96JB1 4490 aa10.46□□□□□ -0.74
SNRPB-202ENST00000438552 A0A0J9YXV3 536 aa10.45□□□□□ -0.74
SNRPB-202ENST00000438552 PMVKQ15126 192 aa10.45□□□□□ -0.74
SNRPB-202ENST00000438552 FAM19A3Q7Z5A8 133 aa10.45□□□□□ -0.74
SNRPB-202ENST00000438552 FAM19A2Q8N3H0 131 aa10.45□□□□□ -0.74
SNRPB-202ENST00000438552 CST9LQ9H4G1 147 aa10.45□□□□□ -0.74
SNRPB-202ENST00000438552 A0A087WZ39 114 aa10.44□□□□□ -0.74
SNRPB-202ENST00000438552 ZNF561-AS1K7EIQ3 104 aa10.44□□□□□ -0.74
SNRPB-202ENST00000438552 CDK2AP2O75956 126 aa10.44□□□□□ -0.74
SNRPB-202ENST00000438552 APOMO95445 188 aa10.44□□□□□ -0.74
SNRPB-202ENST00000438552 HAMPP81172 84 aa10.44□□□□□ -0.74
SNRPB-202ENST00000438552 SPAG11BQ08648 103 aa10.44□□□□□ -0.74
SNRPB-202ENST00000438552 C9orf163Q8N9P6 203 aa10.44□□□□□ -0.74
SNRPB-202ENST00000438552 ORAOV1Q8WV07 137 aa10.44□□□□□ -0.74
SNRPB-202ENST00000438552 HIST1H2BLQ99880 126 aa10.44□□□□□ -0.74
SNRPB-202ENST00000438552 HSPG2P98160 4391 aa10.44□□□□□ -0.74
SNRPB-202ENST00000438552 IGLV4-69A0A075B6H9 119 aa10.43□□□□□ -0.74
SNRPB-202ENST00000438552 IGHV3-64A0A075B6Q5 118 aa10.43□□□□□ -0.74
SNRPB-202ENST00000438552 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.43□□□□□ -0.74
SNRPB-202ENST00000438552 ATP5LO75964 103 aa10.43□□□□□ -0.74
SNRPB-202ENST00000438552 HERVK_113P63121 156 aa10.43□□□□□ -0.74
SNRPB-202ENST00000438552 OR10D4PQ8NGN7 298 aa10.43□□□□□ -0.74
SNRPB-202ENST00000438552 GEMIN7Q9H840 131 aaKnown RBP10.43□□□□□ -0.74
SNRPB-202ENST00000438552 FAM30AQ9NZY2 134 aa10.43□□□□□ -0.74
SNRPB-202ENST00000438552 SEC11AP67812 179 aa10.42□□□□□ -0.74
SNRPB-202ENST00000438552 CDKN2A-AS1Q9UH64 79 aa10.42□□□□□ -0.74
SNRPB-202ENST00000438552 TINCRA0A1B0GVN0 87 aa10.41□□□□□ -0.74
SNRPB-202ENST00000438552 FABP4P15090 132 aa10.41□□□□□ -0.74
SNRPB-202ENST00000438552 Q6ZSA8 131 aa10.41□□□□□ -0.74
SNRPB-202ENST00000438552 LINC00469Q8N7U9 141 aa10.41□□□□□ -0.74
SNRPB-202ENST00000438552 CARD19Q96LW7 228 aa10.41□□□□□ -0.74
SNRPB-202ENST00000438552 LEPROTL1O95214 131 aa10.4□□□□□ -0.74
SNRPB-202ENST00000438552 XGP55808 180 aa10.4□□□□□ -0.74
SNRPB-202ENST00000438552 SYCNQ0VAF6 134 aa10.4□□□□□ -0.74
SNRPB-202ENST00000438552 IFI27L1Q96BM0 104 aa10.4□□□□□ -0.74
SNRPB-202ENST00000438552 HSPB8Q9UJY1 196 aa10.4□□□□□ -0.74
SNRPB-202ENST00000438552 Q6ZRU5 148 aa10.39□□□□□ -0.75
SNRPB-202ENST00000438552 LINC01561Q8N1V8 128 aa10.39□□□□□ -0.75
SNRPB-202ENST00000438552 CAMK2N2Q96S95 79 aa10.39□□□□□ -0.75
SNRPB-202ENST00000438552 CHAC1Q9BUX1 264 aa10.39□□□□□ -0.75
SNRPB-202ENST00000438552 IGLC3P0DOY3 106 aa10.38□□□□□ -0.75
SNRPB-202ENST00000438552 SDIM1Q6ZPB5 146 aa10.38□□□□□ -0.75
SNRPB-202ENST00000438552 C2orf48Q96LS8 159 aa10.38□□□□□ -0.75
SNRPB-202ENST00000438552 IGLV5-45A0A087WSX0 123 aa10.37□□□□□ -0.75
SNRPB-202ENST00000438552 LOC105371267A0A1B0GV96 52 aa10.37□□□□□ -0.75
SNRPB-202ENST00000438552 SMIM1B2RUZ4 78 aa10.36□□□□□ -0.75
SNRPB-202ENST00000438552 PANO1I0J062 215 aa10.36□□□□□ -0.75
SNRPB-202ENST00000438552 KIAA0087Q14695 138 aa10.36□□□□□ -0.75
SNRPB-202ENST00000438552 TOMM7Q9P0U1 55 aa10.36□□□□□ -0.75
SNRPB-202ENST00000438552 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.36□□□□□ -0.75
SNRPB-202ENST00000438552 H0Y8G0 127 aa10.35□□□□□ -0.75
SNRPB-202ENST00000438552 SPINK8P0C7L1 97 aa10.35□□□□□ -0.75
SNRPB-202ENST00000438552 CHTF8P0CG12 524 aa10.35□□□□□ -0.75
SNRPB-202ENST00000438552 CHTOPQ9Y3Y2 248 aaKnown RBP10.35□□□□□ -0.75
SNRPB-202ENST00000438552 TRAV12-1A0A0B4J245 112 aa10.34□□□□□ -0.75
SNRPB-202ENST00000438552 C11orf86A6NJI1 115 aa10.34□□□□□ -0.75
SNRPB-202ENST00000438552 NDUFA1O15239 70 aa10.34□□□□□ -0.75
SNRPB-202ENST00000438552 ZNF22P17026 224 aaPredicted RBP10.34□□□□□ -0.75
SNRPB-202ENST00000438552 C10orf25Q5T742 122 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms