RNA–Protein interactions for RNA: ENST00000437737.3

LINC01088-201, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 5 BASIC

Gene LINC01088, Length 973 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-201ENST00000437737 CHCHD7Q9BUK0 85 aa9.14□□□□□ -0.95
LINC01088-201ENST00000437737 FABP4P15090 132 aa9.13□□□□□ -0.95
LINC01088-201ENST00000437737 TMEM141Q96I45 108 aa9.13□□□□□ -0.95
LINC01088-201ENST00000437737 SCGB3A1Q96QR1 104 aa9.13□□□□□ -0.95
LINC01088-201ENST00000437737 TIMM21Q9BVV7 248 aa9.13□□□□□ -0.95
LINC01088-201ENST00000437737 SPANXA1Q9NS26 97 aa9.13□□□□□ -0.95
LINC01088-201ENST00000437737 PYGO1Q9Y3Y4 419 aa9.13□□□□□ -0.95
LINC01088-201ENST00000437737 A0A096LNJ9 63 aa9.12□□□□□ -0.95
LINC01088-201ENST00000437737 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.12□□□□□ -0.95
LINC01088-201ENST00000437737 ZNF25P17030 456 aaPredicted RBP9.12□□□□□ -0.95
LINC01088-201ENST00000437737 TIMM17AQ99595 171 aa9.12□□□□□ -0.95
LINC01088-201ENST00000437737 CHCHD5Q9BSY4 110 aa9.12□□□□□ -0.95
LINC01088-201ENST00000437737 MAP1LC3CQ9BXW4 147 aa9.12□□□□□ -0.95
LINC01088-201ENST00000437737 CSDC2Q9Y534 153 aaKnown RBP9.12□□□□□ -0.95
LINC01088-201ENST00000437737 AMMECR1LQ6DCA0 310 aa9.11□□□□□ -0.95
LINC01088-201ENST00000437737 DGAT2L7PQ6IED9 249 aa9.11□□□□□ -0.95
LINC01088-201ENST00000437737 MRPL52Q86TS9 123 aaKnown RBP9.11□□□□□ -0.95
LINC01088-201ENST00000437737 TMEM101Q96IK0 257 aa9.11□□□□□ -0.95
LINC01088-201ENST00000437737 C14orf177Q52M58 125 aa9.1□□□□□ -0.95
LINC01088-201ENST00000437737 Q6ZN92 141 aa9.1□□□□□ -0.95
LINC01088-201ENST00000437737 Q6ZRU5 148 aa9.1□□□□□ -0.95
LINC01088-201ENST00000437737 IFI27L1Q96BM0 104 aa9.1□□□□□ -0.95
LINC01088-201ENST00000437737 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.09□□□□□ -0.95
LINC01088-201ENST00000437737 IGKV2-29A2NJV5 120 aaPredicted RBP9.09□□□□□ -0.95
LINC01088-201ENST00000437737 IGIPA6NJ69 53 aa9.09□□□□□ -0.95
LINC01088-201ENST00000437737 TMEM262E9PQX1 116 aa9.09□□□□□ -0.95
LINC01088-201ENST00000437737 RPL39P62891 51 aaKnown RBP9.09□□□□□ -0.95
LINC01088-201ENST00000437737 UBE2WQ96B02 151 aa9.09□□□□□ -0.95
LINC01088-201ENST00000437737 KLK12Q9UKR0 248 aa9.09□□□□□ -0.95
LINC01088-201ENST00000437737 UBE2D4Q9Y2X8 147 aa9.09□□□□□ -0.95
LINC01088-201ENST00000437737 TNXBP22105 4242 aa9.08□□□□□ -0.96
LINC01088-201ENST00000437737 A0A1B0GUV1 79 aa9.08□□□□□ -0.96
LINC01088-201ENST00000437737 IFITM10A6NMD0 228 aa9.08□□□□□ -0.96
LINC01088-201ENST00000437737 PRSS1P07477 247 aa9.08□□□□□ -0.96
LINC01088-201ENST00000437737 FGF6P10767 208 aa9.08□□□□□ -0.96
LINC01088-201ENST00000437737 AKR1D1P51857 326 aa9.08□□□□□ -0.96
LINC01088-201ENST00000437737 MRPS36P82909 103 aaKnown RBP9.08□□□□□ -0.96
LINC01088-201ENST00000437737 OR5A1Q8NGJ0 315 aa9.08□□□□□ -0.96
LINC01088-201ENST00000437737 OR10D4PQ8NGN7 298 aa9.08□□□□□ -0.96
LINC01088-201ENST00000437737 A0A087WX48 190 aa9.07□□□□□ -0.96
LINC01088-201ENST00000437737 PET117Q6UWS5 81 aa9.07□□□□□ -0.96
LINC01088-201ENST00000437737 VCX2Q9H322 139 aa9.07□□□□□ -0.96
LINC01088-201ENST00000437737 C20orf202A1L168 122 aa9.06□□□□□ -0.96
LINC01088-201ENST00000437737 KRTDAPP60985 99 aa9.06□□□□□ -0.96
LINC01088-201ENST00000437737 GAGE6Q13070 117 aa9.06□□□□□ -0.96
LINC01088-201ENST00000437737 TRAV12-1A0A0B4J245 112 aa9.05□□□□□ -0.96
LINC01088-201ENST00000437737 SYS1-DBNDD2H3BUS1 97 aa9.05□□□□□ -0.96
LINC01088-201ENST00000437737 C3orf79P0CE67 100 aa9.05□□□□□ -0.96
LINC01088-201ENST00000437737 PMVKQ15126 192 aa9.05□□□□□ -0.96
LINC01088-201ENST00000437737 TEX43Q6ZNM6 134 aa9.05□□□□□ -0.96
LINC01088-201ENST00000437737 ZNF664Q8N3J9 261 aa9.05□□□□□ -0.96
LINC01088-201ENST00000437737 C2orf88Q9BSF0 95 aa9.05□□□□□ -0.96
LINC01088-201ENST00000437737 IGLV4-3A0A075B6K6 122 aa9.04□□□□□ -0.96
LINC01088-201ENST00000437737 LOC105371267A0A1B0GV96 52 aa9.04□□□□□ -0.96
LINC01088-201ENST00000437737 LINC00173Q6ZV60 143 aa9.04□□□□□ -0.96
LINC01088-201ENST00000437737 C1orf43Q9BWL3 253 aa9.04□□□□□ -0.96
LINC01088-201ENST00000437737 CDC42SE2Q9NRR3 84 aa9.04□□□□□ -0.96
LINC01088-201ENST00000437737 RBX1P62877 108 aa9.03□□□□□ -0.96
LINC01088-201ENST00000437737 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.03□□□□□ -0.96
LINC01088-201ENST00000437737 CCL25O15444 150 aa9.02□□□□□ -0.97
LINC01088-201ENST00000437737 AMELXQ99217 191 aa9.02□□□□□ -0.97
LINC01088-201ENST00000437737 CST9LQ9H4G1 147 aa9.02□□□□□ -0.97
LINC01088-201ENST00000437737 USP17L23D6RBM5 183 aa9.01□□□□□ -0.97
LINC01088-201ENST00000437737 H0Y8G0 127 aa9.01□□□□□ -0.97
LINC01088-201ENST00000437737 CRPP02741 224 aa9.01□□□□□ -0.97
LINC01088-201ENST00000437737 SEC11AP67812 179 aa9.01□□□□□ -0.97
LINC01088-201ENST00000437737 JOSD1Q15040 202 aaPredicted RBP9.01□□□□□ -0.97
LINC01088-201ENST00000437737 MPV17L2Q567V2 206 aa9.01□□□□□ -0.97
LINC01088-201ENST00000437737 SCGB1D1O95968 90 aa9□□□□□ -0.97
LINC01088-201ENST00000437737 ANGP03950 147 aaKnown RBP9□□□□□ -0.97
LINC01088-201ENST00000437737 LINC01545Q5VT33 79 aa9□□□□□ -0.97
LINC01088-201ENST00000437737 Q6ZUT4 128 aa9□□□□□ -0.97
LINC01088-201ENST00000437737 C9orf163Q8N9P6 203 aa9□□□□□ -0.97
LINC01088-201ENST00000437737 OPRPNQ99935 248 aaPredicted RBP9□□□□□ -0.97
LINC01088-201ENST00000437737 CHTOPQ9Y3Y2 248 aaKnown RBP9□□□□□ -0.97
LINC01088-201ENST00000437737 IGLV4-60A0A075B6I1 120 aa8.99□□□□□ -0.97
LINC01088-201ENST00000437737 F8VRH5 84 aa8.99□□□□□ -0.97
LINC01088-201ENST00000437737 PANO1I0J062 215 aa8.99□□□□□ -0.97
LINC01088-201ENST00000437737 PLNP26678 52 aa8.99□□□□□ -0.97
LINC01088-201ENST00000437737 ODF1Q14990 250 aa8.99□□□□□ -0.97
LINC01088-201ENST00000437737 DPM2O94777 84 aa8.98□□□□□ -0.97
LINC01088-201ENST00000437737 SS18Q15532 418 aa8.98□□□□□ -0.97
LINC01088-201ENST00000437737 FAM104AQ969W3 186 aa8.98□□□□□ -0.97
LINC01088-201ENST00000437737 ENHOQ6UWT2 76 aa8.97□□□□□ -0.97
LINC01088-201ENST00000437737 TRAV8-4A0A0B4J246 113 aa8.96□□□□□ -0.98
LINC01088-201ENST00000437737 IGKCP01834 107 aa8.96□□□□□ -0.98
LINC01088-201ENST00000437737 UBE2D1P51668 147 aa8.96□□□□□ -0.98
LINC01088-201ENST00000437737 HERVK_113P63121 156 aa8.96□□□□□ -0.98
LINC01088-201ENST00000437737 REG3AQ06141 175 aa8.96□□□□□ -0.98
LINC01088-201ENST00000437737 RNASE13Q5GAN3 156 aaKnown RBP8.96□□□□□ -0.98
LINC01088-201ENST00000437737 FAM19A3Q7Z5A8 133 aa8.96□□□□□ -0.98
LINC01088-201ENST00000437737 LINC00269Q8N2A0 174 aa8.96□□□□□ -0.98
LINC01088-201ENST00000437737 DPH3Q96FX2 82 aa8.96□□□□□ -0.98
LINC01088-201ENST00000437737 MRPL35Q9NZE8 188 aaKnown RBP8.96□□□□□ -0.98
LINC01088-201ENST00000437737 TRAV13-1A0A0B4J241 112 aa8.95□□□□□ -0.98
LINC01088-201ENST00000437737 TINCRA0A1B0GVN0 87 aa8.95□□□□□ -0.98
LINC01088-201ENST00000437737 SMIM6P0DI80 62 aa8.95□□□□□ -0.98
LINC01088-201ENST00000437737 SDIM1Q6ZPB5 146 aa8.95□□□□□ -0.98
LINC01088-201ENST00000437737 GEMIN7Q9H840 131 aaKnown RBP8.95□□□□□ -0.98
LINC01088-201ENST00000437737 PRR34Q9NV39 138 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms