RNA–Protein interactions for RNA: ENST00000435607.3

SCN4A-201, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN4A, Length 7,805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-201ENST00000435607 LINC00574Q9H8X3 128 aa8.26□□□□□ -1.09
SCN4A-201ENST00000435607 AGRNO00468 2067 aa8.26□□□□□ -1.09
SCN4A-201ENST00000435607 F8WDY8 70 aa8.26□□□□□ -1.09
SCN4A-201ENST00000435607 C1orf137Q5JT78 98 aa8.26□□□□□ -1.09
SCN4A-201ENST00000435607 TRBV7-6A0A0J9YX20 115 aa8.26□□□□□ -1.09
SCN4A-201ENST00000435607 LINC01556Q5JQF7 62 aa8.26□□□□□ -1.09
SCN4A-201ENST00000435607 C20orf173Q96LM9 149 aa8.26□□□□□ -1.09
SCN4A-201ENST00000435607 P0C879 139 aa8.26□□□□□ -1.09
SCN4A-201ENST00000435607 NDUFV3P56181 108 aaKnown RBP8.26□□□□□ -1.09
SCN4A-201ENST00000435607 IGLV2-8P01709 118 aa8.26□□□□□ -1.09
SCN4A-201ENST00000435607 Q8IZM0 81 aa8.26□□□□□ -1.09
SCN4A-201ENST00000435607 EBI3Q14213 229 aa8.25□□□□□ -1.09
SCN4A-201ENST00000435607 ZNF80P51504 273 aaPredicted RBP8.25□□□□□ -1.09
SCN4A-201ENST00000435607 MRPS36P82909 103 aaKnown RBP8.25□□□□□ -1.09
SCN4A-201ENST00000435607 WFDC10AQ9H1F0 79 aa8.25□□□□□ -1.09
SCN4A-201ENST00000435607 TRBV27A0A0K0K1C4 114 aa8.25□□□□□ -1.09
SCN4A-201ENST00000435607 PCDH15Q96QU1 1955 aa8.24□□□□□ -1.09
SCN4A-201ENST00000435607 EGFEM1PQ0D2K5 195 aa8.24□□□□□ -1.09
SCN4A-201ENST00000435607 FAM30AQ9NZY2 134 aa8.24□□□□□ -1.09
SCN4A-201ENST00000435607 IGHV6-1A0A0B4J1U7 121 aa8.24□□□□□ -1.09
SCN4A-201ENST00000435607 KIAA1549LQ6ZVL6 1849 aa8.23□□□□□ -1.09
SCN4A-201ENST00000435607 PTH2Q96A98 100 aa8.23□□□□□ -1.09
SCN4A-201ENST00000435607 LINC00526Q96FQ7 95 aa8.23□□□□□ -1.09
SCN4A-201ENST00000435607 A0A0U1RQV1 116 aa8.23□□□□□ -1.09
SCN4A-201ENST00000435607 IGLV2-11P01706 119 aa8.23□□□□□ -1.09
SCN4A-201ENST00000435607 C2orf48Q96LS8 159 aa8.23□□□□□ -1.09
SCN4A-201ENST00000435607 ALPK3Q96L96 1907 aa8.22□□□□□ -1.09
SCN4A-201ENST00000435607 C11orf71Q6IPW1 123 aa8.22□□□□□ -1.09
SCN4A-201ENST00000435607 RAI1Q7Z5J4 1906 aaPredicted RBP8.22□□□□□ -1.09
SCN4A-201ENST00000435607 TRIAP1O43715 76 aa8.22□□□□□ -1.09
SCN4A-201ENST00000435607 IMUPQ9GZP8 106 aa8.22□□□□□ -1.09
SCN4A-201ENST00000435607 PCNTO95613 3336 aa8.22□□□□□ -1.09
SCN4A-201ENST00000435607 CYSRT1A8MQ03 144 aa8.22□□□□□ -1.09
SCN4A-201ENST00000435607 GDF5OSQ5U4N7 250 aa8.22□□□□□ -1.09
SCN4A-201ENST00000435607 MBD6Q96DN6 1003 aa8.22□□□□□ -1.09
SCN4A-201ENST00000435607 FRMD6-AS1P0C7T7 363 aa8.21□□□□□ -1.09
SCN4A-201ENST00000435607 FAM229AH3BQW9 127 aa8.21□□□□□ -1.09
SCN4A-201ENST00000435607 A0A1W2PNU3 283 aaPredicted RBP8.21□□□□□ -1.1
SCN4A-201ENST00000435607 SNURFQ9Y675 71 aa8.21□□□□□ -1.1
SCN4A-201ENST00000435607 C6orf223Q8N319 242 aa8.2□□□□□ -1.1
SCN4A-201ENST00000435607 SMIM11BQ8TCY0 68 aa8.2□□□□□ -1.1
SCN4A-201ENST00000435607 IGLV2-14P01704 120 aa8.2□□□□□ -1.1
SCN4A-201ENST00000435607 PTPRSQ13332 1948 aa8.19□□□□□ -1.1
SCN4A-201ENST00000435607 PRR4Q16378 134 aa8.19□□□□□ -1.1
SCN4A-201ENST00000435607 PROK1P58294 105 aa8.19□□□□□ -1.1
SCN4A-201ENST00000435607 PLA2G2EQ9NZK7 142 aa8.19□□□□□ -1.1
SCN4A-201ENST00000435607 NUPR1O60356 82 aa8.18□□□□□ -1.1
SCN4A-201ENST00000435607 MSMPQ1L6U9 139 aa8.18□□□□□ -1.1
SCN4A-201ENST00000435607 PCNX3Q9H6A9 2034 aa8.18□□□□□ -1.1
SCN4A-201ENST00000435607 Q9BRP9 147 aa8.18□□□□□ -1.1
SCN4A-201ENST00000435607 LINC00208Q96KT6 92 aa8.18□□□□□ -1.1
SCN4A-201ENST00000435607 CENPFP49454 3210 aa8.18□□□□□ -1.1
SCN4A-201ENST00000435607 SPINK1P00995 79 aa8.18□□□□□ -1.1
SCN4A-201ENST00000435607 LRRK2Q5S007 2527 aa8.17□□□□□ -1.1
SCN4A-201ENST00000435607 TSHBP01222 138 aa8.17□□□□□ -1.1
SCN4A-201ENST00000435607 C10orf99Q6UWK7 81 aa8.17□□□□□ -1.1
SCN4A-201ENST00000435607 ZFYVE26Q68DK2 2539 aa8.17□□□□□ -1.1
SCN4A-201ENST00000435607 RETNLBQ9BQ08 111 aa8.17□□□□□ -1.1
SCN4A-201ENST00000435607 C22orf34Q6ZV56 151 aa8.15□□□□□ -1.1
SCN4A-201ENST00000435607 CSDC2Q9Y534 153 aaKnown RBP8.15□□□□□ -1.1
SCN4A-201ENST00000435607 hDV103S1A0JD37 113 aa8.15□□□□□ -1.1
SCN4A-201ENST00000435607 PLA2G1BP04054 148 aaKnown RBP8.15□□□□□ -1.11
SCN4A-201ENST00000435607 CDC42SE2Q9NRR3 84 aa8.15□□□□□ -1.11
SCN4A-201ENST00000435607 LINC01547P58512 204 aaPredicted RBP8.15□□□□□ -1.11
SCN4A-201ENST00000435607 Q6Q795 121 aa8.15□□□□□ -1.11
SCN4A-201ENST00000435607 NTM-AS1Q6ZSK4 140 aa8.14□□□□□ -1.11
SCN4A-201ENST00000435607 IGLV1-40P01703 118 aa8.14□□□□□ -1.11
SCN4A-201ENST00000435607 KLLNB2CW77 178 aa8.14□□□□□ -1.11
SCN4A-201ENST00000435607 NAV2Q8IVL1 2488 aa8.14□□□□□ -1.11
SCN4A-201ENST00000435607 C18orf65Q6ZTR6 163 aa8.14□□□□□ -1.11
SCN4A-201ENST00000435607 EDN2P20800 178 aa8.13□□□□□ -1.11
SCN4A-201ENST00000435607 Q6ZTC4 211 aa8.13□□□□□ -1.11
SCN4A-201ENST00000435607 Q8N2B8 174 aa8.13□□□□□ -1.11
SCN4A-201ENST00000435607 TP73-AS1Q9UF72 201 aa8.13□□□□□ -1.11
SCN4A-201ENST00000435607 BRI3O95415 125 aa8.12□□□□□ -1.11
SCN4A-201ENST00000435607 UNQ6190/PRO20217Q6UXQ8 127 aa8.12□□□□□ -1.11
SCN4A-201ENST00000435607 TRAV7A0A075B6U4 112 aa8.12□□□□□ -1.11
SCN4A-201ENST00000435607 CELA1Q9UNI1 258 aa8.12□□□□□ -1.11
SCN4A-201ENST00000435607 RNASE3P12724 160 aaKnown RBP8.11□□□□□ -1.11
SCN4A-201ENST00000435607 C16orf95Q9H693 158 aa8.11□□□□□ -1.11
SCN4A-201ENST00000435607 IGLV1-51P01701 117 aa8.11□□□□□ -1.11
SCN4A-201ENST00000435607 COX6A2Q02221 97 aa8.11□□□□□ -1.11
SCN4A-201ENST00000435607 NRACQ8N912 160 aa8.11□□□□□ -1.11
SCN4A-201ENST00000435607 SMR3AQ99954 134 aa8.11□□□□□ -1.11
SCN4A-201ENST00000435607 C2CD3Q4AC94 2353 aa8.11□□□□□ -1.11
SCN4A-201ENST00000435607 TRBV10-3A0A0K0K1G6 114 aa8.1□□□□□ -1.11
SCN4A-201ENST00000435607 J3QL48 77 aa8.1□□□□□ -1.11
SCN4A-201ENST00000435607 MT-ATP8P03928 68 aa8.1□□□□□ -1.11
SCN4A-201ENST00000435607 H0Y9P7 68 aa8.1□□□□□ -1.11
SCN4A-201ENST00000435607 C7orf65Q6ZTY9 151 aa8.1□□□□□ -1.11
SCN4A-201ENST00000435607 SMIM26A0A096LP01 95 aa8.09□□□□□ -1.11
SCN4A-201ENST00000435607 RNASE8Q8TDE3 154 aaKnown RBP8.09□□□□□ -1.11
SCN4A-201ENST00000435607 Q8N814 137 aa8.09□□□□□ -1.11
SCN4A-201ENST00000435607 MRPS12O15235 138 aaKnown RBP8.09□□□□□ -1.11
SCN4A-201ENST00000435607 COX7CP15954 63 aa8.09□□□□□ -1.11
SCN4A-201ENST00000435607 PMAIP1Q13794 54 aa8.09□□□□□ -1.11
SCN4A-201ENST00000435607 SBSPONQ8IVN8 264 aa8.09□□□□□ -1.12
SCN4A-201ENST00000435607 Q8N6K4 173 aa8.09□□□□□ -1.12
SCN4A-201ENST00000435607 IGKV2D-30A0A075B6S6 120 aa8.08□□□□□ -1.12
SCN4A-201ENST00000435607 IGKV2-30P06310 120 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms