RNA–Protein interactions for RNA: ENST00000434503.5

LMBR1-210, Transcript of limb development membrane protein 1, humanhuman

TSL 5

Gene LMBR1, Length 930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-210ENST00000434503 CCL25O15444 150 aa13.06□□□□□ -0.32
LMBR1-210ENST00000434503 ATP6V1G1O75348 118 aa13.06□□□□□ -0.32
LMBR1-210ENST00000434503 SMAGPQ0VAQ4 97 aa13.06□□□□□ -0.32
LMBR1-210ENST00000434503 MRPL52Q86TS9 123 aaKnown RBP13.06□□□□□ -0.32
LMBR1-210ENST00000434503 PRSS3P2Q8NHM4 247 aa13.06□□□□□ -0.32
LMBR1-210ENST00000434503 PLAC8Q9NZF1 115 aa13.06□□□□□ -0.32
LMBR1-210ENST00000434503 RAB5AP20339 215 aa13.05□□□□□ -0.32
LMBR1-210ENST00000434503 TMEM18Q96B42 140 aa13.05□□□□□ -0.32
LMBR1-210ENST00000434503 CSDC2Q9Y534 153 aaKnown RBP13.05□□□□□ -0.32
LMBR1-210ENST00000434503 LINC01546A6NGU7 62 aa13.04□□□□□ -0.32
LMBR1-210ENST00000434503 CDC42SE2Q9NRR3 84 aa13.04□□□□□ -0.32
LMBR1-210ENST00000434503 IGKV2-24A0A0C4DH68 120 aa13.03□□□□□ -0.32
LMBR1-210ENST00000434503 G0S2P27469 103 aa13.03□□□□□ -0.32
LMBR1-210ENST00000434503 SS18Q15532 418 aa13.03□□□□□ -0.32
LMBR1-210ENST00000434503 MAJINQ3KP22 176 aa13.03□□□□□ -0.32
LMBR1-210ENST00000434503 ZNF664Q8N3J9 261 aa13.03□□□□□ -0.32
LMBR1-210ENST00000434503 TIMM21Q9BVV7 248 aa13.03□□□□□ -0.32
LMBR1-210ENST00000434503 IGHV1-58A0A0C4DH39 117 aa13.02□□□□□ -0.33
LMBR1-210ENST00000434503 LOC389332A0A1B0GUA5 103 aa13.02□□□□□ -0.33
LMBR1-210ENST00000434503 ORMDL2Q53FV1 153 aa13.02□□□□□ -0.33
LMBR1-210ENST00000434503 LINC00526Q96FQ7 95 aa13.02□□□□□ -0.33
LMBR1-210ENST00000434503 IFI27P40305 119 aaPredicted RBP13.01□□□□□ -0.33
LMBR1-210ENST00000434503 C7orf33Q8WU49 177 aa13.01□□□□□ -0.33
LMBR1-210ENST00000434503 SCO1O75880 301 aa13□□□□□ -0.33
LMBR1-210ENST00000434503 TNXBP22105 4242 aa12.99□□□□□ -0.33
LMBR1-210ENST00000434503 LINC01549A6NIU2 74 aa12.99□□□□□ -0.33
LMBR1-210ENST00000434503 CD164L2Q6UWJ8 174 aa12.99□□□□□ -0.33
LMBR1-210ENST00000434503 STPG4Q8N801 248 aa12.99□□□□□ -0.33
LMBR1-210ENST00000434503 C18orf32Q8TCD1 76 aa12.99□□□□□ -0.33
LMBR1-210ENST00000434503 A0A096LNI7 61 aa12.98□□□□□ -0.33
LMBR1-210ENST00000434503 TRGC2P03986 189 aa12.98□□□□□ -0.33
LMBR1-210ENST00000434503 LINC01600Q96MT4 127 aa12.98□□□□□ -0.33
LMBR1-210ENST00000434503 PYGO1Q9Y3Y4 419 aa12.98□□□□□ -0.33
LMBR1-210ENST00000434503 LRP2P98164 4655 aa12.98□□□□□ -0.33
LMBR1-210ENST00000434503 CARD19Q96LW7 228 aa12.97□□□□□ -0.33
LMBR1-210ENST00000434503 SPANXA1Q9NS26 97 aa12.97□□□□□ -0.33
LMBR1-210ENST00000434503 UBE2D4Q9Y2X8 147 aa12.97□□□□□ -0.33
LMBR1-210ENST00000434503 NPSP0C0P6 89 aa12.96□□□□□ -0.33
LMBR1-210ENST00000434503 RAB5BP61020 215 aa12.96□□□□□ -0.33
LMBR1-210ENST00000434503 RNASE13Q5GAN3 156 aaKnown RBP12.96□□□□□ -0.33
LMBR1-210ENST00000434503 ZNF561-AS1K7EIQ3 104 aa12.95□□□□□ -0.34
LMBR1-210ENST00000434503 MRPS36P82909 103 aaKnown RBP12.95□□□□□ -0.34
LMBR1-210ENST00000434503 RNF213Q63HN8 5207 aa12.95□□□□□ -0.34
LMBR1-210ENST00000434503 C1orf196B1AJZ1 125 aa12.94□□□□□ -0.34
LMBR1-210ENST00000434503 LINC00614P0C842 121 aa12.94□□□□□ -0.34
LMBR1-210ENST00000434503 PRR3P79522 188 aaKnown RBP12.94□□□□□ -0.34
LMBR1-210ENST00000434503 SYCNQ0VAF6 134 aa12.94□□□□□ -0.34
LMBR1-210ENST00000434503 FA2HQ7L5A8 372 aa12.94□□□□□ -0.34
LMBR1-210ENST00000434503 CYSLTR1Q9Y271 337 aa12.94□□□□□ -0.34
LMBR1-210ENST00000434503 RPL39P62891 51 aaKnown RBP12.93□□□□□ -0.34
LMBR1-210ENST00000434503 LINC00474Q9P2X8 69 aa12.93□□□□□ -0.34
LMBR1-210ENST00000434503 TRAV13-1A0A0B4J241 112 aa12.92□□□□□ -0.34
LMBR1-210ENST00000434503 COX7A2LO14548 114 aa12.92□□□□□ -0.34
LMBR1-210ENST00000434503 MALP21145 153 aa12.92□□□□□ -0.34
LMBR1-210ENST00000434503 ODF1Q14990 250 aa12.92□□□□□ -0.34
LMBR1-210ENST00000434503 C2orf66Q6UXQ4 117 aa12.92□□□□□ -0.34
LMBR1-210ENST00000434503 Q6ZUT4 128 aa12.92□□□□□ -0.34
LMBR1-210ENST00000434503 PKIGQ9Y2B9 76 aa12.92□□□□□ -0.34
LMBR1-210ENST00000434503 IGLV4-69A0A075B6H9 119 aa12.91□□□□□ -0.34
LMBR1-210ENST00000434503 TOMM6Q96B49 74 aa12.91□□□□□ -0.34
LMBR1-210ENST00000434503 URB1-AS1Q96HZ7 61 aa12.91□□□□□ -0.34
LMBR1-210ENST00000434503 FAM104AQ969W3 186 aa12.9□□□□□ -0.34
LMBR1-210ENST00000434503 CHCHD1Q96BP2 118 aaKnown RBP12.9□□□□□ -0.34
LMBR1-210ENST00000434503 A0A0J9YXV3 536 aa12.89□□□□□ -0.35
LMBR1-210ENST00000434503 IGIPA6NJ69 53 aa12.89□□□□□ -0.35
LMBR1-210ENST00000434503 C5orf38Q86SI9 138 aa12.89□□□□□ -0.35
LMBR1-210ENST00000434503 TIMM17AQ99595 171 aa12.88□□□□□ -0.35
LMBR1-210ENST00000434503 KRTAP10-8P60410 259 aa12.87□□□□□ -0.35
LMBR1-210ENST00000434503 PAPPA-AS1Q5QFB9 102 aa12.87□□□□□ -0.35
LMBR1-210ENST00000434503 ERASQ7Z444 233 aa12.87□□□□□ -0.35
LMBR1-210ENST00000434503 LOC107984640A0A0U1RRK4 108 aa12.86□□□□□ -0.35
LMBR1-210ENST00000434503 PTTG1IPP53801 180 aa12.86□□□□□ -0.35
LMBR1-210ENST00000434503 GAGE2BQ13066 116 aa12.86□□□□□ -0.35
LMBR1-210ENST00000434503 SPINK6Q6UWN8 80 aa12.86□□□□□ -0.35
LMBR1-210ENST00000434503 TMEM141Q96I45 108 aa12.86□□□□□ -0.35
LMBR1-210ENST00000434503 CAMK2N2Q96S95 79 aa12.86□□□□□ -0.35
LMBR1-210ENST00000434503 IGLV4-3A0A075B6K6 122 aa12.85□□□□□ -0.35
LMBR1-210ENST00000434503 REG3GQ6UW15 175 aa12.84□□□□□ -0.35
LMBR1-210ENST00000434503 BAGE3Q86Y29 109 aa12.84□□□□□ -0.35
LMBR1-210ENST00000434503 AMELXQ99217 191 aa12.84□□□□□ -0.35
LMBR1-210ENST00000434503 OPRPNQ99935 248 aaPredicted RBP12.84□□□□□ -0.35
LMBR1-210ENST00000434503 A0A096LNJ9 63 aa12.83□□□□□ -0.36
LMBR1-210ENST00000434503 APOMO95445 188 aa12.83□□□□□ -0.36
LMBR1-210ENST00000434503 HBDP02042 147 aa12.83□□□□□ -0.36
LMBR1-210ENST00000434503 C2orf48Q96LS8 159 aa12.83□□□□□ -0.36
LMBR1-210ENST00000434503 SCGB3A1Q96QR1 104 aa12.83□□□□□ -0.36
LMBR1-210ENST00000434503 SRSF9Q13242 221 aaKnown RBP eCLIP12.82□□□□□ -0.36
LMBR1-210ENST00000434503 Q6ZN92 141 aa12.82□□□□□ -0.36
LMBR1-210ENST00000434503 HIST1H2BKO60814 126 aa12.81□□□□□ -0.36
LMBR1-210ENST00000434503 HIST1H2BJP06899 126 aa12.81□□□□□ -0.36
LMBR1-210ENST00000434503 HIST1H2BOP23527 126 aa12.81□□□□□ -0.36
LMBR1-210ENST00000434503 HIST1H2BBP33778 126 aa12.81□□□□□ -0.36
LMBR1-210ENST00000434503 HIST1H2BDP58876 126 aa12.81□□□□□ -0.36
LMBR1-210ENST00000434503 HIST1H2BCP62807 126 aa12.81□□□□□ -0.36
LMBR1-210ENST00000434503 SPAG11BQ08648 103 aa12.81□□□□□ -0.36
LMBR1-210ENST00000434503 HIST2H2BEQ16778 126 aa12.81□□□□□ -0.36
LMBR1-210ENST00000434503 PDZD11Q5EBL8 140 aa12.81□□□□□ -0.36
LMBR1-210ENST00000434503 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.81□□□□□ -0.36
LMBR1-210ENST00000434503 HIST1H2BHQ93079 126 aa12.81□□□□□ -0.36
LMBR1-210ENST00000434503 HIST1H2BNQ99877 126 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms