RNA–Protein interactions for RNA: ENST00000433271.6

TMEM248-205, Transcript of transmembrane protein 248, humanhuman

TSL 1 (best)

Gene TMEM248, Length 1,610 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-205ENST00000433271 CHCHD10Q8WYQ3 142 aaPredicted RBP17.77■□□□□ 0.44
TMEM248-205ENST00000433271 XCL1P47992 114 aa17.76■□□□□ 0.43
TMEM248-205ENST00000433271 IGLV5-45A0A087WSX0 123 aa17.74■□□□□ 0.43
TMEM248-205ENST00000433271 CD164L2Q6UWJ8 174 aa17.74■□□□□ 0.43
TMEM248-205ENST00000433271 ATOH7Q8N100 152 aa17.74■□□□□ 0.43
TMEM248-205ENST00000433271 Q9HAA7 133 aa17.74■□□□□ 0.43
TMEM248-205ENST00000433271 IGHV3OR16-9A0A0B4J2B5 98 aa17.73■□□□□ 0.43
TMEM248-205ENST00000433271 C1orf43Q9BWL3 253 aa17.73■□□□□ 0.43
TMEM248-205ENST00000433271 ZNF22P17026 224 aaPredicted RBP17.72■□□□□ 0.43
TMEM248-205ENST00000433271 LINC00469Q8N7U9 141 aa17.72■□□□□ 0.43
TMEM248-205ENST00000433271 TMEM170BQ5T4T1 132 aa17.72■□□□□ 0.43
TMEM248-205ENST00000433271 CDKN2A-AS1Q9UH64 79 aa17.72■□□□□ 0.43
TMEM248-205ENST00000433271 RMI2Q96E14 147 aa17.7■□□□□ 0.42
TMEM248-205ENST00000433271 IGKV2D-24A0A075B6R9 120 aa17.69■□□□□ 0.42
TMEM248-205ENST00000433271 GAGE12HA6NDE8 117 aa17.69■□□□□ 0.42
TMEM248-205ENST00000433271 KRTAP26-1Q6PEX3 210 aa17.69■□□□□ 0.42
TMEM248-205ENST00000433271 FOXI1Q12951 378 aa17.69■□□□□ 0.42
TMEM248-205ENST00000433271 H3BRM9 83 aa17.68■□□□□ 0.42
TMEM248-205ENST00000433271 M0R2N4 97 aa17.67■□□□□ 0.42
TMEM248-205ENST00000433271 SMIM6P0DI80 62 aa17.67■□□□□ 0.42
TMEM248-205ENST00000433271 Q6ZR54 194 aa17.67■□□□□ 0.42
TMEM248-205ENST00000433271 ALMS1Q8TCU4 4167 aa17.67■□□□□ 0.42
TMEM248-205ENST00000433271 A0A087WZ39 114 aa17.66■□□□□ 0.42
TMEM248-205ENST00000433271 C5orf38Q86SI9 138 aa17.66■□□□□ 0.42
TMEM248-205ENST00000433271 COX11Q9Y6N1 276 aa17.66■□□□□ 0.42
TMEM248-205ENST00000433271 COX7A2LO14548 114 aa17.65■□□□□ 0.42
TMEM248-205ENST00000433271 STPG4Q8N801 248 aa17.65■□□□□ 0.42
TMEM248-205ENST00000433271 TMEM223A0PJW6 202 aa17.65■□□□□ 0.42
TMEM248-205ENST00000433271 hDV102S1A0JD36 115 aa17.64■□□□□ 0.41
TMEM248-205ENST00000433271 CDPF1Q6NVV7 123 aa17.64■□□□□ 0.41
TMEM248-205ENST00000433271 MAJINQ3KP22 176 aa17.63■□□□□ 0.41
TMEM248-205ENST00000433271 LINC01561Q8N1V8 128 aa17.63■□□□□ 0.41
TMEM248-205ENST00000433271 TM2D2Q9BX73 214 aa17.63■□□□□ 0.41
TMEM248-205ENST00000433271 HSBP1L1C9JCN9 74 aa17.62■□□□□ 0.41
TMEM248-205ENST00000433271 SPINK8P0C7L1 97 aa17.61■□□□□ 0.41
TMEM248-205ENST00000433271 HERVK_113P61574 105 aa17.61■□□□□ 0.41
TMEM248-205ENST00000433271 SMIM1B2RUZ4 78 aa17.6■□□□□ 0.41
TMEM248-205ENST00000433271 MALP21145 153 aa17.6■□□□□ 0.41
TMEM248-205ENST00000433271 VAMP8Q9BV40 100 aa17.6■□□□□ 0.41
TMEM248-205ENST00000433271 LCE6AA0A183 80 aa17.58■□□□□ 0.41
TMEM248-205ENST00000433271 IGHV1-58A0A0C4DH39 117 aa17.57■□□□□ 0.4
TMEM248-205ENST00000433271 IGLV5-39A0A0G2JS06 123 aa17.57■□□□□ 0.4
TMEM248-205ENST00000433271 E9PLD3 99 aa17.57■□□□□ 0.4
TMEM248-205ENST00000433271 MAPKAPK5-AS1Q8N8E1 139 aa17.57■□□□□ 0.4
TMEM248-205ENST00000433271 IGHV3-64A0A075B6Q5 118 aa17.56■□□□□ 0.4
TMEM248-205ENST00000433271 S100A12P80511 92 aa17.56■□□□□ 0.4
TMEM248-205ENST00000433271 ANKRD39Q53RE8 183 aa17.56■□□□□ 0.4
TMEM248-205ENST00000433271 APOMO95445 188 aa17.55■□□□□ 0.4
TMEM248-205ENST00000433271 C6orf223Q8N319 242 aa17.55■□□□□ 0.4
TMEM248-205ENST00000433271 PAM16Q9Y3D7 125 aa17.55■□□□□ 0.4
TMEM248-205ENST00000433271 KMT2AQ03164 3969 aa17.55■□□□□ 0.4
TMEM248-205ENST00000433271 Q6ZRN7 208 aaPredicted RBP17.54■□□□□ 0.4
TMEM248-205ENST00000433271 PSCAO43653 123 aa17.54■□□□□ 0.4
TMEM248-205ENST00000433271 LEPROTO15243 131 aa17.53■□□□□ 0.4
TMEM248-205ENST00000433271 C12orf57Q99622 126 aa17.53■□□□□ 0.4
TMEM248-205ENST00000433271 DNAH6Q9C0G6 4158 aa17.52■□□□□ 0.4
TMEM248-205ENST00000433271 IGKV2D-26A0A0A0MRZ7 120 aa17.52■□□□□ 0.4
TMEM248-205ENST00000433271 SPATA45Q537H7 98 aa17.52■□□□□ 0.4
TMEM248-205ENST00000433271 C1orf134Q5TEV5 83 aa17.51■□□□□ 0.39
TMEM248-205ENST00000433271 CFAP161Q6P656 301 aa17.51■□□□□ 0.39
TMEM248-205ENST00000433271 LINC00518Q8N0U6 118 aa17.51■□□□□ 0.39
TMEM248-205ENST00000433271 PLEKHB2Q96CS7 222 aa17.51■□□□□ 0.39
TMEM248-205ENST00000433271 ORAOV1Q8WV07 137 aa17.5■□□□□ 0.39
TMEM248-205ENST00000433271 J3QQQ9 107 aa17.49■□□□□ 0.39
TMEM248-205ENST00000433271 NMUP48645 174 aa17.49■□□□□ 0.39
TMEM248-205ENST00000433271 C15orf56Q8N910 161 aa17.49■□□□□ 0.39
TMEM248-205ENST00000433271 COX7B2Q8TF08 81 aa17.48■□□□□ 0.39
TMEM248-205ENST00000433271 TOMM7Q9P0U1 55 aa17.48■□□□□ 0.39
TMEM248-205ENST00000433271 TSPEAR-AS2P59090 65 aa17.47■□□□□ 0.39
TMEM248-205ENST00000433271 Q8IZM0 81 aa17.47■□□□□ 0.39
TMEM248-205ENST00000433271 USP17L23D6RBM5 183 aa17.46■□□□□ 0.39
TMEM248-205ENST00000433271 PRSS2P07478 247 aa17.46■□□□□ 0.39
TMEM248-205ENST00000433271 LGALS3P17931 250 aaKnown RBP17.45■□□□□ 0.38
TMEM248-205ENST00000433271 KIAA0087Q14695 138 aa17.45■□□□□ 0.38
TMEM248-205ENST00000433271 GVQW2A0A096LPI5 108 aaPredicted RBP17.44■□□□□ 0.38
TMEM248-205ENST00000433271 SPAG11BQ08648 103 aa17.44■□□□□ 0.38
TMEM248-205ENST00000433271 C6orf226Q5I0X4 101 aa17.44■□□□□ 0.38
TMEM248-205ENST00000433271 HIGD2BQ4VC39 106 aa17.43■□□□□ 0.38
TMEM248-205ENST00000433271 ZNF561-AS1K7EIQ3 104 aa17.42■□□□□ 0.38
TMEM248-205ENST00000433271 LECT2O14960 151 aa17.42■□□□□ 0.38
TMEM248-205ENST00000433271 PCP2Q8IVA1 136 aa17.42■□□□□ 0.38
TMEM248-205ENST00000433271 TTTY13Q9BZ97 58 aa17.41■□□□□ 0.38
TMEM248-205ENST00000433271 NDUFA12Q9UI09 145 aa17.41■□□□□ 0.38
TMEM248-205ENST00000433271 LRCOL1A6NCL2 159 aa17.4■□□□□ 0.38
TMEM248-205ENST00000433271 COX8AP10176 69 aa17.4■□□□□ 0.38
TMEM248-205ENST00000433271 C14orf144Q96I85 54 aa17.4■□□□□ 0.38
TMEM248-205ENST00000433271 SACSQ9NZJ4 4579 aa17.4■□□□□ 0.38
TMEM248-205ENST00000433271 DNAH10Q8IVF4 4471 aa17.4■□□□□ 0.38
TMEM248-205ENST00000433271 WFDC2Q14508 124 aa17.39■□□□□ 0.38
TMEM248-205ENST00000433271 LINC00526Q96FQ7 95 aa17.39■□□□□ 0.38
TMEM248-205ENST00000433271 CKS1BP61024 79 aa17.39■□□□□ 0.37
TMEM248-205ENST00000433271 NTN5Q8WTR8 489 aaPredicted RBP17.39■□□□□ 0.37
TMEM248-205ENST00000433271 CXCL5P42830 114 aa17.38■□□□□ 0.37
TMEM248-205ENST00000433271 ZNF625Q96I27 306 aaPredicted RBP17.38■□□□□ 0.37
TMEM248-205ENST00000433271 ZNF815PA8K554 130 aa17.37■□□□□ 0.37
TMEM248-205ENST00000433271 NDUFA1O15239 70 aa17.37■□□□□ 0.37
TMEM248-205ENST00000433271 C14orf177Q52M58 125 aa17.37■□□□□ 0.37
TMEM248-205ENST00000433271 SFTA2Q6UW10 78 aa17.37■□□□□ 0.37
TMEM248-205ENST00000433271 DNAH2Q9P225 4427 aa17.36■□□□□ 0.37
TMEM248-205ENST00000433271 MYMXA0A1B0GTQ4 84 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms