RNA–Protein interactions for RNA: ENST00000431540.7

CDH13-203, Transcript of cadherin 13, humanhuman

TSL 1 (best) BASIC

Gene CDH13, Length 831 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-203ENST00000431540 KIR2DL4Q99706 377 aa5.05□□□□□ -1.6
CDH13-203ENST00000431540 A0A1W2PNN7 141 aa5.04□□□□□ -1.6
CDH13-203ENST00000431540 H0Y9J4 135 aa5.04□□□□□ -1.6
CDH13-203ENST00000431540 K7EN84 100 aa5.04□□□□□ -1.6
CDH13-203ENST00000431540 RAB4AP20338 218 aa5.04□□□□□ -1.6
CDH13-203ENST00000431540 CTAG1AP78358 180 aa5.04□□□□□ -1.6
CDH13-203ENST00000431540 GAGE2BQ13066 116 aa5.04□□□□□ -1.6
CDH13-203ENST00000431540 SLC51BQ86UW2 128 aa5.04□□□□□ -1.6
CDH13-203ENST00000431540 C20orf78Q9BR46 151 aa5.04□□□□□ -1.6
CDH13-203ENST00000431540 RNASE7Q9H1E1 156 aaKnown RBP5.04□□□□□ -1.6
CDH13-203ENST00000431540 TRBV24-1A0A075B6N3 115 aa5.03□□□□□ -1.6
CDH13-203ENST00000431540 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.03□□□□□ -1.6
CDH13-203ENST00000431540 BLOC1S1P78537 153 aa5.03□□□□□ -1.6
CDH13-203ENST00000431540 C1orf137Q5JT78 98 aa5.03□□□□□ -1.6
CDH13-203ENST00000431540 OSTCQ9NRP0 149 aa5.03□□□□□ -1.6
CDH13-203ENST00000431540 UBE2D4Q9Y2X8 147 aa5.03□□□□□ -1.6
CDH13-203ENST00000431540 A0A1B0GW15 77 aa5.02□□□□□ -1.61
CDH13-203ENST00000431540 SMLR1H3BR10 107 aa5.02□□□□□ -1.61
CDH13-203ENST00000431540 NDUFA1O15239 70 aa5.02□□□□□ -1.61
CDH13-203ENST00000431540 FCER1GP30273 86 aa5.02□□□□□ -1.61
CDH13-203ENST00000431540 SUMO2P61956 95 aaKnown RBP5.02□□□□□ -1.61
CDH13-203ENST00000431540 MRPS36P82909 103 aaKnown RBP5.02□□□□□ -1.61
CDH13-203ENST00000431540 RIGQ13278 110 aa5.02□□□□□ -1.61
CDH13-203ENST00000431540 IGHV3OR16-9A0A0B4J2B5 98 aa5.01□□□□□ -1.61
CDH13-203ENST00000431540 HIGD1CA8MV81 97 aa5.01□□□□□ -1.61
CDH13-203ENST00000431540 LINC01561Q8N1V8 128 aa5.01□□□□□ -1.61
CDH13-203ENST00000431540 LINC00526Q96FQ7 95 aa5.01□□□□□ -1.61
CDH13-203ENST00000431540 TMEM242Q9NWH2 141 aa5.01□□□□□ -1.61
CDH13-203ENST00000431540 A0A087WZ39 114 aa5□□□□□ -1.61
CDH13-203ENST00000431540 TRBV30A0A0K0K1B3 111 aa5□□□□□ -1.61
CDH13-203ENST00000431540 TCTE3Q8IZS6 198 aa5□□□□□ -1.61
CDH13-203ENST00000431540 SPANXA1Q9NS26 97 aa5□□□□□ -1.61
CDH13-203ENST00000431540 NUPR1O60356 82 aa4.99□□□□□ -1.61
CDH13-203ENST00000431540 RPL18AQ02543 176 aaKnown RBP4.99□□□□□ -1.61
CDH13-203ENST00000431540 SPAG11BQ08648 103 aa4.99□□□□□ -1.61
CDH13-203ENST00000431540 FAM74A3Q4VXF1 159 aa4.99□□□□□ -1.61
CDH13-203ENST00000431540 PHF5AQ7RTV0 110 aaKnown RBP4.99□□□□□ -1.61
CDH13-203ENST00000431540 PRR26Q8N8Z3 221 aa4.99□□□□□ -1.61
CDH13-203ENST00000431540 NRACQ8N912 160 aa4.99□□□□□ -1.61
CDH13-203ENST00000431540 PYGO1Q9Y3Y4 419 aa4.99□□□□□ -1.61
CDH13-203ENST00000431540 TRAV13-1A0A0B4J241 112 aa4.98□□□□□ -1.61
CDH13-203ENST00000431540 PPBPP02775 128 aa4.98□□□□□ -1.61
CDH13-203ENST00000431540 S100A8P05109 93 aa4.98□□□□□ -1.61
CDH13-203ENST00000431540 NPSP0C0P6 89 aa4.98□□□□□ -1.61
CDH13-203ENST00000431540 KRTAP1-4P0C5Y4 121 aa4.98□□□□□ -1.61
CDH13-203ENST00000431540 FAM104BQ5XKR9 115 aa4.98□□□□□ -1.61
CDH13-203ENST00000431540 C5orf38Q86SI9 138 aa4.98□□□□□ -1.61
CDH13-203ENST00000431540 LINC01551Q86U37 167 aa4.98□□□□□ -1.61
CDH13-203ENST00000431540 SMDT1Q9H4I9 107 aa4.98□□□□□ -1.61
CDH13-203ENST00000431540 NAT8BQ9UHF3 227 aa4.98□□□□□ -1.61
CDH13-203ENST00000431540 ZNF861PO60384 105 aa4.97□□□□□ -1.61
CDH13-203ENST00000431540 UBE2D1P51668 147 aa4.97□□□□□ -1.61
CDH13-203ENST00000431540 AMN1Q8IY45 258 aa4.97□□□□□ -1.61
CDH13-203ENST00000431540 ORAOV1Q8WV07 137 aa4.97□□□□□ -1.61
CDH13-203ENST00000431540 SMIM7Q9BQ49 75 aa4.97□□□□□ -1.61
CDH13-203ENST00000431540 TGIF2-C20orf24A0A0A6YYL0 155 aa4.96□□□□□ -1.62
CDH13-203ENST00000431540 PRSS47A8MTI9 375 aa4.96□□□□□ -1.62
CDH13-203ENST00000431540 NDUFC2-KCTD14E9PQ53 114 aa4.96□□□□□ -1.62
CDH13-203ENST00000431540 F8W036 122 aa4.96□□□□□ -1.62
CDH13-203ENST00000431540 HBBP68871 147 aa4.96□□□□□ -1.62
CDH13-203ENST00000431540 KIAA0087Q14695 138 aa4.96□□□□□ -1.62
CDH13-203ENST00000431540 LBHQ53QV2 105 aaPredicted RBP4.96□□□□□ -1.62
CDH13-203ENST00000431540 OPRPNQ99935 248 aaPredicted RBP4.96□□□□□ -1.62
CDH13-203ENST00000431540 TP73-AS1Q9UF72 201 aa4.96□□□□□ -1.62
CDH13-203ENST00000431540 SMIM27A0A1W2PRY6 76 aa4.95□□□□□ -1.62
CDH13-203ENST00000431540 ZNF727A8MUV8 499 aa4.95□□□□□ -1.62
CDH13-203ENST00000431540 K7EMI3 77 aa4.95□□□□□ -1.62
CDH13-203ENST00000431540 CKS2P33552 79 aa4.95□□□□□ -1.62
CDH13-203ENST00000431540 MRPL51Q4U2R6 128 aaKnown RBP4.95□□□□□ -1.62
CDH13-203ENST00000431540 FAM104AQ969W3 186 aa4.95□□□□□ -1.62
CDH13-203ENST00000431540 PACRGQ96M98 296 aaPredicted RBP4.95□□□□□ -1.62
CDH13-203ENST00000431540 C6orf48Q9UBA6 75 aa4.95□□□□□ -1.62
CDH13-203ENST00000431540 V9GYV3 84 aa4.95□□□□□ -1.62
CDH13-203ENST00000431540 TNFRSF6BO95407 300 aa4.94□□□□□ -1.62
CDH13-203ENST00000431540 G0S2P27469 103 aa4.94□□□□□ -1.62
CDH13-203ENST00000431540 IFI27P40305 119 aaPredicted RBP4.94□□□□□ -1.62
CDH13-203ENST00000431540 UNQ6190/PRO20217Q6UXQ8 127 aa4.94□□□□□ -1.62
CDH13-203ENST00000431540 Q6ZUT4 128 aa4.94□□□□□ -1.62
CDH13-203ENST00000431540 FAM19A3Q7Z5A8 133 aa4.94□□□□□ -1.62
CDH13-203ENST00000431540 SMIM2Q9BVW6 85 aa4.94□□□□□ -1.62
CDH13-203ENST00000431540 EIF5A2Q9GZV4 153 aaKnown RBP4.94□□□□□ -1.62
CDH13-203ENST00000431540 LAMTOR2Q9Y2Q5 125 aa4.94□□□□□ -1.62
CDH13-203ENST00000431540 LPAP08519 4548 aa4.94□□□□□ -1.62
CDH13-203ENST00000431540 M0QXV9 152 aa4.93□□□□□ -1.62
CDH13-203ENST00000431540 RAB5AP20339 215 aa4.93□□□□□ -1.62
CDH13-203ENST00000431540 UBE2BP63146 152 aa4.93□□□□□ -1.62
CDH13-203ENST00000431540 SEC11AP67812 179 aa4.93□□□□□ -1.62
CDH13-203ENST00000431540 PRR4Q16378 134 aa4.93□□□□□ -1.62
CDH13-203ENST00000431540 FAM168BA1KXE4 195 aa4.92□□□□□ -1.62
CDH13-203ENST00000431540 IFITM10A6NMD0 228 aa4.92□□□□□ -1.62
CDH13-203ENST00000431540 SRP19P09132 144 aaKnown RBP4.92□□□□□ -1.62
CDH13-203ENST00000431540 RPL28P46779 137 aaKnown RBP4.92□□□□□ -1.62
CDH13-203ENST00000431540 GAGE2EQ4V326 116 aa4.92□□□□□ -1.62
CDH13-203ENST00000431540 LINC00242Q5T6M2 205 aa4.92□□□□□ -1.62
CDH13-203ENST00000431540 C10orf25Q5T742 122 aa4.92□□□□□ -1.62
CDH13-203ENST00000431540 Q6ZN92 141 aa4.92□□□□□ -1.62
CDH13-203ENST00000431540 KRTAP7-1Q8IUC3 87 aa4.92□□□□□ -1.62
CDH13-203ENST00000431540 TMEM141Q96I45 108 aa4.92□□□□□ -1.62
CDH13-203ENST00000431540 GAGE2DQ9UEU5 116 aa4.92□□□□□ -1.62
CDH13-203ENST00000431540 SMKR1H3BMG3 65 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms