RNA–Protein interactions for RNA: ENST00000431460.1

TRERNA1-201, translation regulatory long non-coding RNA 1, humanhuman

TSL 2 BASIC

Gene TRERNA1, Length 462 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERNA1-201ENST00000431460 AMELXQ99217 191 aa7.79□□□□□ -1.16
TRERNA1-201ENST00000431460 VCX2Q9H322 139 aa7.79□□□□□ -1.16
TRERNA1-201ENST00000431460 A0A096LNJ9 63 aa7.78□□□□□ -1.16
TRERNA1-201ENST00000431460 IFITM10A6NMD0 228 aa7.78□□□□□ -1.16
TRERNA1-201ENST00000431460 USP17L23D6RBM5 183 aa7.78□□□□□ -1.16
TRERNA1-201ENST00000431460 HBDP02042 147 aa7.78□□□□□ -1.16
TRERNA1-201ENST00000431460 XCL1P47992 114 aa7.78□□□□□ -1.16
TRERNA1-201ENST00000431460 CFAP161Q6P656 301 aa7.77□□□□□ -1.17
TRERNA1-201ENST00000431460 LINC00173Q6ZV60 143 aa7.77□□□□□ -1.17
TRERNA1-201ENST00000431460 C2orf88Q9BSF0 95 aa7.77□□□□□ -1.17
TRERNA1-201ENST00000431460 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.76□□□□□ -1.17
TRERNA1-201ENST00000431460 PMCHL1Q16048 86 aa7.76□□□□□ -1.17
TRERNA1-201ENST00000431460 PDZD11Q5EBL8 140 aa7.76□□□□□ -1.17
TRERNA1-201ENST00000431460 HIST1H2BKO60814 126 aa7.75□□□□□ -1.17
TRERNA1-201ENST00000431460 HSBP1O75506 76 aa7.75□□□□□ -1.17
TRERNA1-201ENST00000431460 HIST1H2BJP06899 126 aa7.75□□□□□ -1.17
TRERNA1-201ENST00000431460 HIST1H2BOP23527 126 aa7.75□□□□□ -1.17
TRERNA1-201ENST00000431460 HIST1H2BBP33778 126 aa7.75□□□□□ -1.17
TRERNA1-201ENST00000431460 UBE2D1P51668 147 aa7.75□□□□□ -1.17
TRERNA1-201ENST00000431460 HIST1H2BDP58876 126 aa7.75□□□□□ -1.17
TRERNA1-201ENST00000431460 HIST1H2BCP62807 126 aa7.75□□□□□ -1.17
TRERNA1-201ENST00000431460 HIST2H2BEQ16778 126 aa7.75□□□□□ -1.17
TRERNA1-201ENST00000431460 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.75□□□□□ -1.17
TRERNA1-201ENST00000431460 LINC00242Q5T6M2 205 aa7.75□□□□□ -1.17
TRERNA1-201ENST00000431460 ZC2HC1BQ5TFG8 222 aa7.75□□□□□ -1.17
TRERNA1-201ENST00000431460 FAM19A3Q7Z5A8 133 aa7.75□□□□□ -1.17
TRERNA1-201ENST00000431460 HIST1H2BHQ93079 126 aa7.75□□□□□ -1.17
TRERNA1-201ENST00000431460 HIST1H2BNQ99877 126 aa7.75□□□□□ -1.17
TRERNA1-201ENST00000431460 HIST1H2BMQ99879 126 aa7.75□□□□□ -1.17
TRERNA1-201ENST00000431460 IGHV3OR16-9A0A0B4J2B5 98 aa7.74□□□□□ -1.17
TRERNA1-201ENST00000431460 COX7A2LO14548 114 aa7.74□□□□□ -1.17
TRERNA1-201ENST00000431460 SERF1AO75920 110 aa7.74□□□□□ -1.17
TRERNA1-201ENST00000431460 ATP5LO75964 103 aa7.74□□□□□ -1.17
TRERNA1-201ENST00000431460 PRSS1P07477 247 aa7.74□□□□□ -1.17
TRERNA1-201ENST00000431460 LINC00310P59036 64 aa7.74□□□□□ -1.17
TRERNA1-201ENST00000431460 C15orf56Q8N910 161 aa7.74□□□□□ -1.17
TRERNA1-201ENST00000431460 IGHV1-58A0A0C4DH39 117 aa7.73□□□□□ -1.17
TRERNA1-201ENST00000431460 FAM229AH3BQW9 127 aa7.73□□□□□ -1.17
TRERNA1-201ENST00000431460 SEC11AP67812 179 aa7.73□□□□□ -1.17
TRERNA1-201ENST00000431460 PMVKQ15126 192 aa7.73□□□□□ -1.17
TRERNA1-201ENST00000431460 CST9LQ9H4G1 147 aa7.73□□□□□ -1.17
TRERNA1-201ENST00000431460 GVQW2A0A096LPI5 108 aaPredicted RBP7.72□□□□□ -1.17
TRERNA1-201ENST00000431460 INAFM2P0DMQ5 153 aa7.72□□□□□ -1.17
TRERNA1-201ENST00000431460 MALP21145 153 aa7.72□□□□□ -1.17
TRERNA1-201ENST00000431460 COX6A2Q02221 97 aa7.72□□□□□ -1.17
TRERNA1-201ENST00000431460 C5orf38Q86SI9 138 aa7.72□□□□□ -1.17
TRERNA1-201ENST00000431460 FAM19A2Q8N3H0 131 aa7.72□□□□□ -1.17
TRERNA1-201ENST00000431460 FAT1Q14517 4588 aa7.72□□□□□ -1.17
TRERNA1-201ENST00000431460 A0A087WZ39 114 aa7.71□□□□□ -1.18
TRERNA1-201ENST00000431460 hDV102S1A0JD36 115 aa7.71□□□□□ -1.18
TRERNA1-201ENST00000431460 NUPR1O60356 82 aa7.71□□□□□ -1.18
TRERNA1-201ENST00000431460 CNBPP62633 177 aaKnown RBP7.71□□□□□ -1.18
TRERNA1-201ENST00000431460 HERVK_113P63121 156 aa7.71□□□□□ -1.18
TRERNA1-201ENST00000431460 Q6ZSA8 131 aa7.71□□□□□ -1.18
TRERNA1-201ENST00000431460 SCXQ7RTU7 201 aa7.71□□□□□ -1.18
TRERNA1-201ENST00000431460 LINC01561Q8N1V8 128 aa7.71□□□□□ -1.18
TRERNA1-201ENST00000431460 DNAH8Q96JB1 4490 aa7.7□□□□□ -1.18
TRERNA1-201ENST00000431460 A0A0J9YXV3 536 aa7.7□□□□□ -1.18
TRERNA1-201ENST00000431460 TINCRA0A1B0GVN0 87 aa7.7□□□□□ -1.18
TRERNA1-201ENST00000431460 APOMO95445 188 aa7.7□□□□□ -1.18
TRERNA1-201ENST00000431460 LINC00528Q8N1L1 170 aa7.7□□□□□ -1.18
TRERNA1-201ENST00000431460 IFI27L1Q96BM0 104 aa7.7□□□□□ -1.18
TRERNA1-201ENST00000431460 GEMIN7Q9H840 131 aaKnown RBP7.7□□□□□ -1.18
TRERNA1-201ENST00000431460 IGHV3-64A0A075B6Q5 118 aa7.69□□□□□ -1.18
TRERNA1-201ENST00000431460 NDUFA6P56556 154 aa7.69□□□□□ -1.18
TRERNA1-201ENST00000431460 HIGD2BQ4VC39 106 aa7.69□□□□□ -1.18
TRERNA1-201ENST00000431460 COA6Q5JTJ3 125 aaKnown RBP7.69□□□□□ -1.18
TRERNA1-201ENST00000431460 OR10D4PQ8NGN7 298 aa7.69□□□□□ -1.18
TRERNA1-201ENST00000431460 IGLV5-45A0A087WSX0 123 aa7.68□□□□□ -1.18
TRERNA1-201ENST00000431460 ZNF561-AS1K7EIQ3 104 aa7.68□□□□□ -1.18
TRERNA1-201ENST00000431460 LEPROTL1O95214 131 aa7.68□□□□□ -1.18
TRERNA1-201ENST00000431460 SLPIP03973 132 aa7.68□□□□□ -1.18
TRERNA1-201ENST00000431460 CHAC1Q9BUX1 264 aa7.68□□□□□ -1.18
TRERNA1-201ENST00000431460 VPS13BQ7Z7G8 4022 aa7.67□□□□□ -1.18
TRERNA1-201ENST00000431460 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.67□□□□□ -1.18
TRERNA1-201ENST00000431460 TRAV12-1A0A0B4J245 112 aa7.67□□□□□ -1.18
TRERNA1-201ENST00000431460 IGLC3P0DOY3 106 aa7.67□□□□□ -1.18
TRERNA1-201ENST00000431460 LINC00469Q8N7U9 141 aa7.67□□□□□ -1.18
TRERNA1-201ENST00000431460 C9orf163Q8N9P6 203 aa7.67□□□□□ -1.18
TRERNA1-201ENST00000431460 CIRBP-AS1Q8TBR5 109 aa7.67□□□□□ -1.18
TRERNA1-201ENST00000431460 CDKN2A-AS1Q9UH64 79 aa7.67□□□□□ -1.18
TRERNA1-201ENST00000431460 HSPB8Q9UJY1 196 aa7.67□□□□□ -1.18
TRERNA1-201ENST00000431460 IGLV4-69A0A075B6H9 119 aa7.66□□□□□ -1.18
TRERNA1-201ENST00000431460 F8WDY8 70 aa7.66□□□□□ -1.18
TRERNA1-201ENST00000431460 ORAOV1Q8WV07 137 aa7.66□□□□□ -1.18
TRERNA1-201ENST00000431460 C2orf48Q96LS8 159 aa7.66□□□□□ -1.18
TRERNA1-201ENST00000431460 PACRGQ96M98 296 aaPredicted RBP7.66□□□□□ -1.18
TRERNA1-201ENST00000431460 FABP4P15090 132 aa7.65□□□□□ -1.18
TRERNA1-201ENST00000431460 SPAG11BQ08648 103 aa7.65□□□□□ -1.18
TRERNA1-201ENST00000431460 LINC00526Q96FQ7 95 aa7.65□□□□□ -1.18
TRERNA1-201ENST00000431460 CHTOPQ9Y3Y2 248 aaKnown RBP7.65□□□□□ -1.18
TRERNA1-201ENST00000431460 PLA2G1BP04054 148 aaKnown RBP7.64□□□□□ -1.19
TRERNA1-201ENST00000431460 S100A6P06703 90 aa7.64□□□□□ -1.19
TRERNA1-201ENST00000431460 SYCNQ0VAF6 134 aa7.64□□□□□ -1.19
TRERNA1-201ENST00000431460 KIAA0087Q14695 138 aa7.64□□□□□ -1.19
TRERNA1-201ENST00000431460 SVIPQ8NHG7 77 aa7.64□□□□□ -1.19
TRERNA1-201ENST00000431460 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.64□□□□□ -1.19
TRERNA1-201ENST00000431460 SRRM2Q9UQ35 2752 aaKnown RBP7.63□□□□□ -1.19
TRERNA1-201ENST00000431460 F8VRH5 84 aa7.63□□□□□ -1.19
TRERNA1-201ENST00000431460 H3BRM9 83 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms