RNA–Protein interactions for RNA: ENST00000431413.5

HERC3-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 5

Gene HERC3, Length 761 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-206ENST00000431413 F8WDY8 70 aa9.44□□□□□ -0.9
HERC3-206ENST00000431413 RPL39P62891 51 aaKnown RBP9.44□□□□□ -0.9
HERC3-206ENST00000431413 MRPS36P82909 103 aaKnown RBP9.44□□□□□ -0.9
HERC3-206ENST00000431413 RNF151Q2KHN1 245 aa9.44□□□□□ -0.9
HERC3-206ENST00000431413 A0A1B0GXF2 115 aa9.43□□□□□ -0.9
HERC3-206ENST00000431413 NPYP01303 97 aa9.43□□□□□ -0.9
HERC3-206ENST00000431413 RPL18AQ02543 176 aaKnown RBP9.43□□□□□ -0.9
HERC3-206ENST00000431413 ATP5L2Q7Z4Y8 100 aa9.43□□□□□ -0.9
HERC3-206ENST00000431413 ORMDL3Q8N138 153 aa9.43□□□□□ -0.9
HERC3-206ENST00000431413 UBR4Q5T4S7 5183 aa9.42□□□□□ -0.9
HERC3-206ENST00000431413 IFITM10A6NMD0 228 aa9.42□□□□□ -0.9
HERC3-206ENST00000431413 IFI27P40305 119 aaPredicted RBP9.42□□□□□ -0.9
HERC3-206ENST00000431413 TMEM136Q6ZRR5 245 aa9.42□□□□□ -0.9
HERC3-206ENST00000431413 ORAOV1Q8WV07 137 aa9.42□□□□□ -0.9
HERC3-206ENST00000431413 IMMP2LQ96T52 175 aa9.42□□□□□ -0.9
HERC3-206ENST00000431413 IGHV3OR16-9A0A0B4J2B5 98 aa9.41□□□□□ -0.9
HERC3-206ENST00000431413 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.41□□□□□ -0.9
HERC3-206ENST00000431413 PRELID3AQ96N28 172 aa9.41□□□□□ -0.9
HERC3-206ENST00000431413 MRPL35Q9NZE8 188 aaKnown RBP9.41□□□□□ -0.9
HERC3-206ENST00000431413 TGIF2-C20orf24A0A0A6YYL0 155 aa9.4□□□□□ -0.9
HERC3-206ENST00000431413 A0A0J9YXV3 536 aa9.4□□□□□ -0.9
HERC3-206ENST00000431413 NDUFA1O15239 70 aa9.4□□□□□ -0.9
HERC3-206ENST00000431413 C9orf116Q5BN46 136 aaPredicted RBP9.4□□□□□ -0.9
HERC3-206ENST00000431413 OPRPNQ99935 248 aaPredicted RBP9.4□□□□□ -0.9
HERC3-206ENST00000431413 A0A1W2PNN7 141 aa9.39□□□□□ -0.91
HERC3-206ENST00000431413 MT-ND6P03923 174 aa9.39□□□□□ -0.91
HERC3-206ENST00000431413 SRSF9Q13242 221 aaKnown RBP eCLIP9.39□□□□□ -0.91
HERC3-206ENST00000431413 LAMTOR2Q9Y2Q5 125 aa9.39□□□□□ -0.91
HERC3-206ENST00000431413 PNRC1Q12796 327 aaPredicted RBP9.38□□□□□ -0.91
HERC3-206ENST00000431413 FAM104AQ969W3 186 aa9.38□□□□□ -0.91
HERC3-206ENST00000431413 PYGO1Q9Y3Y4 419 aa9.38□□□□□ -0.91
HERC3-206ENST00000431413 MT-ND4LP03901 98 aa9.37□□□□□ -0.91
HERC3-206ENST00000431413 ANAPC16Q96DE5 110 aa9.37□□□□□ -0.91
HERC3-206ENST00000431413 PRSS47A8MTI9 375 aa9.36□□□□□ -0.91
HERC3-206ENST00000431413 RAB14P61106 215 aa9.36□□□□□ -0.91
HERC3-206ENST00000431413 TMEM141Q96I45 108 aa9.36□□□□□ -0.91
HERC3-206ENST00000431413 MAP1LC3AQ9H492 121 aa9.36□□□□□ -0.91
HERC3-206ENST00000431413 A0A087WZ39 114 aa9.35□□□□□ -0.91
HERC3-206ENST00000431413 TEX43Q6ZNM6 134 aa9.35□□□□□ -0.91
HERC3-206ENST00000431413 PSORS1C2Q9UIG4 136 aa9.35□□□□□ -0.91
HERC3-206ENST00000431413 IGLV4-3A0A075B6K6 122 aa9.34□□□□□ -0.91
HERC3-206ENST00000431413 LOC389332A0A1B0GUA5 103 aa9.34□□□□□ -0.91
HERC3-206ENST00000431413 TLX1NBP0CAT3 122 aa9.34□□□□□ -0.91
HERC3-206ENST00000431413 KRTAP10-8P60410 259 aa9.34□□□□□ -0.91
HERC3-206ENST00000431413 C1orf137Q5JT78 98 aa9.34□□□□□ -0.91
HERC3-206ENST00000431413 UNQ6190/PRO20217Q6UXQ8 127 aa9.34□□□□□ -0.91
HERC3-206ENST00000431413 Q6ZN92 141 aa9.34□□□□□ -0.91
HERC3-206ENST00000431413 PHF5AQ7RTV0 110 aaKnown RBP9.34□□□□□ -0.91
HERC3-206ENST00000431413 C2orf88Q9BSF0 95 aa9.34□□□□□ -0.91
HERC3-206ENST00000431413 CYSLTR1Q9Y271 337 aa9.34□□□□□ -0.91
HERC3-206ENST00000431413 LINC00242Q5T6M2 205 aa9.33□□□□□ -0.92
HERC3-206ENST00000431413 C10orf25Q5T742 122 aa9.33□□□□□ -0.92
HERC3-206ENST00000431413 TRBV30A0A0K0K1B3 111 aa9.32□□□□□ -0.92
HERC3-206ENST00000431413 K7EMI3 77 aa9.32□□□□□ -0.92
HERC3-206ENST00000431413 GAGE2EQ4V326 116 aa9.32□□□□□ -0.92
HERC3-206ENST00000431413 ORMDL2Q53FV1 153 aa9.32□□□□□ -0.92
HERC3-206ENST00000431413 C2orf66Q6UXQ4 117 aa9.32□□□□□ -0.92
HERC3-206ENST00000431413 Q8N8P6 123 aa9.32□□□□□ -0.92
HERC3-206ENST00000431413 PACRGQ96M98 296 aaPredicted RBP9.32□□□□□ -0.92
HERC3-206ENST00000431413 C6orf48Q9UBA6 75 aa9.32□□□□□ -0.92
HERC3-206ENST00000431413 GAGE2DQ9UEU5 116 aa9.32□□□□□ -0.92
HERC3-206ENST00000431413 LINC01561Q8N1V8 128 aa9.31□□□□□ -0.92
HERC3-206ENST00000431413 VCX2Q9H322 139 aa9.31□□□□□ -0.92
HERC3-206ENST00000431413 TNXBP22105 4242 aa9.3□□□□□ -0.92
HERC3-206ENST00000431413 NPSP0C0P6 89 aa9.3□□□□□ -0.92
HERC3-206ENST00000431413 G0S2P27469 103 aa9.3□□□□□ -0.92
HERC3-206ENST00000431413 UBE2D1P51668 147 aa9.3□□□□□ -0.92
HERC3-206ENST00000431413 KIAA0087Q14695 138 aa9.3□□□□□ -0.92
HERC3-206ENST00000431413 PRSS2P07478 247 aa9.29□□□□□ -0.92
HERC3-206ENST00000431413 PAPPA-AS1Q5QFB9 102 aa9.29□□□□□ -0.92
HERC3-206ENST00000431413 FAM19A5Q7Z5A7 132 aaPredicted RBP9.29□□□□□ -0.92
HERC3-206ENST00000431413 DIRC1Q969H9 104 aa9.29□□□□□ -0.92
HERC3-206ENST00000431413 CTDSP1Q9GZU7 261 aa9.29□□□□□ -0.92
HERC3-206ENST00000431413 NXT2Q9NPJ8 142 aaKnown RBP9.29□□□□□ -0.92
HERC3-206ENST00000431413 FAM168BA1KXE4 195 aa9.28□□□□□ -0.92
HERC3-206ENST00000431413 NDUFC2-KCTD14E9PQ53 114 aa9.28□□□□□ -0.92
HERC3-206ENST00000431413 IGLV7-43P04211 117 aa9.28□□□□□ -0.92
HERC3-206ENST00000431413 SEC11AP67812 179 aa9.28□□□□□ -0.92
HERC3-206ENST00000431413 CKS1BP61024 79 aa9.27□□□□□ -0.93
HERC3-206ENST00000431413 UBE2BP63146 152 aa9.27□□□□□ -0.93
HERC3-206ENST00000431413 C2orf82Q6UX34 121 aa9.27□□□□□ -0.93
HERC3-206ENST00000431413 AMELXQ99217 191 aa9.27□□□□□ -0.93
HERC3-206ENST00000431413 M0QXV9 152 aa9.26□□□□□ -0.93
HERC3-206ENST00000431413 ODF1Q14990 250 aa9.26□□□□□ -0.93
HERC3-206ENST00000431413 C6orf226Q5I0X4 101 aa9.26□□□□□ -0.93
HERC3-206ENST00000431413 TOMM7Q9P0U1 55 aa9.26□□□□□ -0.93
HERC3-206ENST00000431413 IGIPA6NJ69 53 aa9.25□□□□□ -0.93
HERC3-206ENST00000431413 HERVK_113P63121 156 aa9.25□□□□□ -0.93
HERC3-206ENST00000431413 LINC00173Q6ZV60 143 aa9.25□□□□□ -0.93
HERC3-206ENST00000431413 ZC2HC1BQ5TFG8 222 aa9.24□□□□□ -0.93
HERC3-206ENST00000431413 FAM19A3Q7Z5A8 133 aa9.24□□□□□ -0.93
HERC3-206ENST00000431413 Q8IZM0 81 aa9.24□□□□□ -0.93
HERC3-206ENST00000431413 LRP2P98164 4655 aa9.23□□□□□ -0.93
HERC3-206ENST00000431413 H0Y9J4 135 aa9.23□□□□□ -0.93
HERC3-206ENST00000431413 TIMM17AQ99595 171 aa9.23□□□□□ -0.93
HERC3-206ENST00000431413 ALKBH7Q9BT30 221 aaPredicted RBP9.23□□□□□ -0.93
HERC3-206ENST00000431413 GEMIN7Q9H840 131 aaKnown RBP9.23□□□□□ -0.93
HERC3-206ENST00000431413 CLLU1Q5K131 121 aa9.22□□□□□ -0.93
HERC3-206ENST00000431413 TRAV9-1A0A075B6T8 112 aa9.21□□□□□ -0.94
HERC3-206ENST00000431413 LINC01549A6NIU2 74 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms