RNA–Protein interactions for RNA: ENST00000430321.5

UBR3-204, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 5

Gene UBR3, Length 5,411 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-204ENST00000430321 PPDPFQ9H3Y8 114 aa4.19□□□□□ -1.74
UBR3-204ENST00000430321 USF3Q68DE3 2245 aa4.19□□□□□ -1.74
UBR3-204ENST00000430321 RTTNQ86VV8 2226 aa4.18□□□□□ -1.74
UBR3-204ENST00000430321 CLEC2BQ92478 149 aa4.18□□□□□ -1.74
UBR3-204ENST00000430321 TPRP12270 2363 aaKnown RBP4.18□□□□□ -1.74
UBR3-204ENST00000430321 FOXI1Q12951 378 aa4.18□□□□□ -1.74
UBR3-204ENST00000430321 C5orf47Q569G3 176 aa4.18□□□□□ -1.74
UBR3-204ENST00000430321 A0A096LNI7 61 aa4.18□□□□□ -1.74
UBR3-204ENST00000430321 A0A1W2PPR1 153 aa4.18□□□□□ -1.74
UBR3-204ENST00000430321 ICE1Q9Y2F5 2266 aa4.17□□□□□ -1.74
UBR3-204ENST00000430321 CRIP1P50238 77 aa4.17□□□□□ -1.74
UBR3-204ENST00000430321 AMELXQ99217 191 aa4.17□□□□□ -1.74
UBR3-204ENST00000430321 TP53AIP1Q9HCN2 124 aa4.17□□□□□ -1.74
UBR3-204ENST00000430321 TNRC6BQ9UPQ9 1833 aaKnown RBP4.17□□□□□ -1.74
UBR3-204ENST00000430321 IGKV3D-7A0A0C4DH55 119 aa4.17□□□□□ -1.74
UBR3-204ENST00000430321 LINC00242Q5T6M2 205 aa4.17□□□□□ -1.74
UBR3-204ENST00000430321 PRR9Q5T870 116 aa4.17□□□□□ -1.74
UBR3-204ENST00000430321 PCNX3Q9H6A9 2034 aa4.17□□□□□ -1.74
UBR3-204ENST00000430321 C3orf22Q8N5N4 141 aa4.17□□□□□ -1.74
UBR3-204ENST00000430321 C8orf87E5RJ46 101 aa4.16□□□□□ -1.74
UBR3-204ENST00000430321 BRK1Q8WUW1 75 aa4.16□□□□□ -1.74
UBR3-204ENST00000430321 WFDC10BQ8IUB3 73 aa4.16□□□□□ -1.74
UBR3-204ENST00000430321 TET2Q6N021 2002 aaPredicted RBP4.16□□□□□ -1.74
UBR3-204ENST00000430321 SMIM1B2RUZ4 78 aa4.16□□□□□ -1.74
UBR3-204ENST00000430321 FXYD2P54710 66 aa4.16□□□□□ -1.74
UBR3-204ENST00000430321 IGIPA6NJ69 53 aa4.16□□□□□ -1.74
UBR3-204ENST00000430321 DNAH10OSP0CZ25 163 aa4.16□□□□□ -1.74
UBR3-204ENST00000430321 UNQ6190/PRO20217Q6UXQ8 127 aa4.16□□□□□ -1.74
UBR3-204ENST00000430321 SBSPONQ8IVN8 264 aa4.16□□□□□ -1.74
UBR3-204ENST00000430321 COX6A2Q02221 97 aa4.15□□□□□ -1.74
UBR3-204ENST00000430321 C9orf116Q5BN46 136 aaPredicted RBP4.15□□□□□ -1.74
UBR3-204ENST00000430321 CACNA1DQ01668 2161 aa4.15□□□□□ -1.74
UBR3-204ENST00000430321 IGLV4-60A0A075B6I1 120 aa4.15□□□□□ -1.75
UBR3-204ENST00000430321 ESRGQ1W209 222 aa4.15□□□□□ -1.75
UBR3-204ENST00000430321 Q6ZPA2 131 aa4.15□□□□□ -1.75
UBR3-204ENST00000430321 NCOR1O75376 2440 aa4.15□□□□□ -1.75
UBR3-204ENST00000430321 TYMSOSQ8TAI1 123 aa4.15□□□□□ -1.75
UBR3-204ENST00000430321 SMIM11BQ8TCY0 68 aa4.15□□□□□ -1.75
UBR3-204ENST00000430321 ZNF318Q5VUA4 2279 aa4.15□□□□□ -1.75
UBR3-204ENST00000430321 KIAA2026Q5HYC2 2103 aa4.15□□□□□ -1.75
UBR3-204ENST00000430321 GVQW2A0A096LPI5 108 aaPredicted RBP4.14□□□□□ -1.75
UBR3-204ENST00000430321 TRBV10-3A0A0K0K1G6 114 aa4.14□□□□□ -1.75
UBR3-204ENST00000430321 HRCT1Q6UXD1 115 aa4.14□□□□□ -1.75
UBR3-204ENST00000430321 C19orf73Q9NVV2 129 aa4.14□□□□□ -1.75
UBR3-204ENST00000430321 C22orf24Q9Y442 160 aa4.14□□□□□ -1.75
UBR3-204ENST00000430321 GPR179Q6PRD1 2367 aa4.14□□□□□ -1.75
UBR3-204ENST00000430321 ALPK2Q86TB3 2170 aa4.14□□□□□ -1.75
UBR3-204ENST00000430321 Q8N814 137 aa4.14□□□□□ -1.75
UBR3-204ENST00000430321 CACNA1HO95180 2353 aa4.14□□□□□ -1.75
UBR3-204ENST00000430321 RIF1Q5UIP0 2472 aaKnown RBP4.14□□□□□ -1.75
UBR3-204ENST00000430321 FAM236AA0A1B0GUQ0 79 aa4.14□□□□□ -1.75
UBR3-204ENST00000430321 FAM236BA0A1B0GV22 79 aa4.14□□□□□ -1.75
UBR3-204ENST00000430321 LINC00315P59091 139 aa4.14□□□□□ -1.75
UBR3-204ENST00000430321 NTM-AS1Q6ZSK4 140 aa4.14□□□□□ -1.75
UBR3-204ENST00000430321 C11orf21Q9P2W6 132 aa4.13□□□□□ -1.75
UBR3-204ENST00000430321 SMCR5Q8TEV8 140 aa4.13□□□□□ -1.75
UBR3-204ENST00000430321 ATP11AUNQ6ZP68 121 aa4.13□□□□□ -1.75
UBR3-204ENST00000430321 C11orf72Q8NBR9 251 aa4.13□□□□□ -1.75
UBR3-204ENST00000430321 X6R8D5 127 aa4.13□□□□□ -1.75
UBR3-204ENST00000430321 H3BPC8 53 aa4.13□□□□□ -1.75
UBR3-204ENST00000430321 BCE1O60756 84 aa4.13□□□□□ -1.75
UBR3-204ENST00000430321 DOCK11Q5JSL3 2073 aa4.12□□□□□ -1.75
UBR3-204ENST00000430321 ARID1AO14497 2285 aa4.12□□□□□ -1.75
UBR3-204ENST00000430321 UQCRQO14949 82 aa4.12□□□□□ -1.75
UBR3-204ENST00000430321 TRIAP1O43715 76 aa4.12□□□□□ -1.75
UBR3-204ENST00000430321 XGP55808 180 aa4.12□□□□□ -1.75
UBR3-204ENST00000430321 Q8NAQ8 132 aa4.12□□□□□ -1.75
UBR3-204ENST00000430321 FAM19A4Q96LR4 140 aa4.12□□□□□ -1.75
UBR3-204ENST00000430321 FAM240AA0A1B0GVK7 77 aa4.12□□□□□ -1.75
UBR3-204ENST00000430321 Q6ZRU5 148 aa4.12□□□□□ -1.75
UBR3-204ENST00000430321 NACAE9PAV3 2078 aa4.12□□□□□ -1.75
UBR3-204ENST00000430321 SNRNP200O75643 2136 aaKnown RBP4.12□□□□□ -1.75
UBR3-204ENST00000430321 IGHV6-1A0A0B4J1U7 121 aa4.12□□□□□ -1.75
UBR3-204ENST00000430321 TM2D3Q9BRN9 247 aa4.11□□□□□ -1.75
UBR3-204ENST00000430321 ARFGEF3Q5TH69 2177 aa4.11□□□□□ -1.75
UBR3-204ENST00000430321 SERP2Q8N6R1 65 aa4.11□□□□□ -1.75
UBR3-204ENST00000430321 FAM30AQ9NZY2 134 aa4.11□□□□□ -1.75
UBR3-204ENST00000430321 CELA1Q9UNI1 258 aa4.11□□□□□ -1.75
UBR3-204ENST00000430321 CEP250Q9BV73 2442 aa4.11□□□□□ -1.75
UBR3-204ENST00000430321 A0A0U1RQV1 116 aa4.11□□□□□ -1.75
UBR3-204ENST00000430321 RAI1Q7Z5J4 1906 aaPredicted RBP4.11□□□□□ -1.75
UBR3-204ENST00000430321 hDV103S1A0JD37 113 aa4.11□□□□□ -1.75
UBR3-204ENST00000430321 WFDC13Q8IUB5 93 aa4.11□□□□□ -1.75
UBR3-204ENST00000430321 SSBP3-AS1Q7Z2R9 100 aa4.1□□□□□ -1.75
UBR3-204ENST00000430321 MED13Q9UHV7 2174 aa4.1□□□□□ -1.75
UBR3-204ENST00000430321 C9orf163Q8N9P6 203 aa4.1□□□□□ -1.75
UBR3-204ENST00000430321 ENHOQ6UWT2 76 aa4.1□□□□□ -1.75
UBR3-204ENST00000430321 MED12LQ86YW9 2145 aa4.1□□□□□ -1.75
UBR3-204ENST00000430321 LINC00575Q6W349 94 aa4.09□□□□□ -1.75
UBR3-204ENST00000430321 LINC00588Q9Y4M8 146 aa4.09□□□□□ -1.75
UBR3-204ENST00000430321 K7EIL1 84 aa4.09□□□□□ -1.75
UBR3-204ENST00000430321 Q6ZSN1 163 aa4.09□□□□□ -1.75
UBR3-204ENST00000430321 CACNA1GO43497 2377 aa4.09□□□□□ -1.76
UBR3-204ENST00000430321 LINC01546A6NGU7 62 aa4.08□□□□□ -1.76
UBR3-204ENST00000430321 CXCL6P80162 114 aa4.08□□□□□ -1.76
UBR3-204ENST00000430321 IGLV5-39A0A0G2JS06 123 aa4.08□□□□□ -1.76
UBR3-204ENST00000430321 TRAV7A0A075B6U4 112 aa4.08□□□□□ -1.76
UBR3-204ENST00000430321 A8MTW9 85 aa4.08□□□□□ -1.76
UBR3-204ENST00000430321 OTOGLQ3ZCN5 2332 aa4.08□□□□□ -1.76
UBR3-204ENST00000430321 SLPIP03973 132 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 98.4 ms