RNA–Protein interactions for RNA: ENST00000430118.1

HMGB3-203, Transcript of high mobility group box 3, humanhuman

TSL 1 (best)

Gene HMGB3, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-203ENST00000430118 TIMM17AQ99595 171 aa2.68□□□□□ -1.98
HMGB3-203ENST00000430118 RTL8AQ9BWD3 113 aa2.68□□□□□ -1.98
HMGB3-203ENST00000430118 TMEM167BQ9NRX6 74 aa2.68□□□□□ -1.98
HMGB3-203ENST00000430118 KAAG1Q9UBP8 84 aa2.68□□□□□ -1.98
HMGB3-203ENST00000430118 PKIGQ9Y2B9 76 aa2.68□□□□□ -1.98
HMGB3-203ENST00000430118 ABCA13Q86UQ4 5058 aa2.68□□□□□ -1.98
HMGB3-203ENST00000430118 STAB2Q8WWQ8 2551 aa2.67□□□□□ -1.98
HMGB3-203ENST00000430118 DOCK11Q5JSL3 2073 aa2.67□□□□□ -1.98
HMGB3-203ENST00000430118 SMIM26A0A096LP01 95 aa2.67□□□□□ -1.98
HMGB3-203ENST00000430118 TRBV6-6A0A0A6YYG2 114 aa2.67□□□□□ -1.98
HMGB3-203ENST00000430118 TRAV8-1A0A0A6YYK1 113 aa2.67□□□□□ -1.98
HMGB3-203ENST00000430118 LINC01546A6NGU7 62 aa2.67□□□□□ -1.98
HMGB3-203ENST00000430118 IQCF6A8MYZ5 107 aa2.67□□□□□ -1.98
HMGB3-203ENST00000430118 H3BMM0 161 aa2.67□□□□□ -1.98
HMGB3-203ENST00000430118 LY6G6CO95867 125 aa2.67□□□□□ -1.98
HMGB3-203ENST00000430118 IGLV2-8P01709 118 aa2.67□□□□□ -1.98
HMGB3-203ENST00000430118 P01737 135 aa2.67□□□□□ -1.98
HMGB3-203ENST00000430118 HBDP02042 147 aa2.67□□□□□ -1.98
HMGB3-203ENST00000430118 ATP5EP56381 51 aaPredicted RBP2.67□□□□□ -1.98
HMGB3-203ENST00000430118 NPC2P61916 151 aa2.67□□□□□ -1.98
HMGB3-203ENST00000430118 UBE2L3P68036 154 aaKnown RBP2.67□□□□□ -1.98
HMGB3-203ENST00000430118 NDPQ00604 133 aa2.67□□□□□ -1.98
HMGB3-203ENST00000430118 PMAIP1Q13794 54 aa2.67□□□□□ -1.98
HMGB3-203ENST00000430118 GDF5OSQ5U4N7 250 aa2.67□□□□□ -1.98
HMGB3-203ENST00000430118 FAM27BQ5VT28 67 aa2.67□□□□□ -1.98
HMGB3-203ENST00000430118 CEMP1Q6PRD7 247 aaPredicted RBP2.67□□□□□ -1.98
HMGB3-203ENST00000430118 Q6ZR03 302 aa2.67□□□□□ -1.98
HMGB3-203ENST00000430118 HMGN2P46Q86SG4 172 aa2.67□□□□□ -1.98
HMGB3-203ENST00000430118 EXOC3-AS1Q8N2X6 119 aa2.67□□□□□ -1.98
HMGB3-203ENST00000430118 Q8N7P7 452 aa2.67□□□□□ -1.98
HMGB3-203ENST00000430118 UBE2WQ96B02 151 aa2.67□□□□□ -1.98
HMGB3-203ENST00000430118 UPK3BQ9BT76 320 aa2.67□□□□□ -1.98
HMGB3-203ENST00000430118 ZNF492Q9P255 531 aa2.67□□□□□ -1.98
HMGB3-203ENST00000430118 ARHGAP32A7KAX9 2087 aa2.66□□□□□ -1.98
HMGB3-203ENST00000430118 A0A096LNJ9 63 aa2.66□□□□□ -1.98
HMGB3-203ENST00000430118 TRBV7-6A0A0J9YX20 115 aa2.66□□□□□ -1.98
HMGB3-203ENST00000430118 TRBV10-2A0A0K0K1G8 114 aa2.66□□□□□ -1.98
HMGB3-203ENST00000430118 A0A1B0GVX0 72 aa2.66□□□□□ -1.98
HMGB3-203ENST00000430118 PGPA6NDG6 321 aa2.66□□□□□ -1.98
HMGB3-203ENST00000430118 NUPR2A6NF83 97 aa2.66□□□□□ -1.98
HMGB3-203ENST00000430118 UPK2O00526 184 aa2.66□□□□□ -1.98
HMGB3-203ENST00000430118 BPY2O14599 106 aa2.66□□□□□ -1.98
HMGB3-203ENST00000430118 ARL14EPLP0DKL9 152 aa2.66□□□□□ -1.98
HMGB3-203ENST00000430118 CACNG7P62955 275 aa2.66□□□□□ -1.98
HMGB3-203ENST00000430118 RPL18Q07020 188 aaKnown RBP2.66□□□□□ -1.98
HMGB3-203ENST00000430118 LCE1EQ5T753 118 aa2.66□□□□□ -1.98
HMGB3-203ENST00000430118 PRR15Q8IV56 129 aa2.66□□□□□ -1.98
HMGB3-203ENST00000430118 LINC00311Q8N616 119 aa2.66□□□□□ -1.98
HMGB3-203ENST00000430118 SERP2Q8N6R1 65 aa2.66□□□□□ -1.98
HMGB3-203ENST00000430118 LY6G5BQ8NDX9 201 aa2.66□□□□□ -1.98
HMGB3-203ENST00000430118 TM2D3Q9BRN9 247 aa2.66□□□□□ -1.98
HMGB3-203ENST00000430118 LINC00527Q9UJ94 153 aa2.66□□□□□ -1.98
HMGB3-203ENST00000430118 KLK5Q9Y337 293 aaPredicted RBP2.66□□□□□ -1.98
HMGB3-203ENST00000430118 IGKV1D-42A0A075B6H8 117 aa2.65□□□□□ -1.99
HMGB3-203ENST00000430118 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.65□□□□□ -1.99
HMGB3-203ENST00000430118 TRAV26-2A0A0B4J265 109 aa2.65□□□□□ -1.99
HMGB3-203ENST00000430118 HIGD1CA8MV81 97 aa2.65□□□□□ -1.99
HMGB3-203ENST00000430118 BCE1O60756 84 aa2.65□□□□□ -1.99
HMGB3-203ENST00000430118 TCL1BO95988 128 aa2.65□□□□□ -1.99
HMGB3-203ENST00000430118 LTAP01374 205 aa2.65□□□□□ -1.99
HMGB3-203ENST00000430118 IGLV3-1P01715 115 aa2.65□□□□□ -1.99
HMGB3-203ENST00000430118 PSMB2P49721 201 aa2.65□□□□□ -1.99
HMGB3-203ENST00000430118 FXYD4P59646 89 aa2.65□□□□□ -1.99
HMGB3-203ENST00000430118 CYYR1Q96J86 154 aa2.65□□□□□ -1.99
HMGB3-203ENST00000430118 DPH3P1Q9H4G8 78 aa2.65□□□□□ -1.99
HMGB3-203ENST00000430118 ANAPC11Q9NYG5 84 aa2.65□□□□□ -1.99
HMGB3-203ENST00000430118 HHLA3Q9XRX5 114 aa2.65□□□□□ -1.99
HMGB3-203ENST00000430118 DNAH10Q8IVF4 4471 aa2.65□□□□□ -1.99
HMGB3-203ENST00000430118 TRBV19A0A075B6N1 114 aa2.64□□□□□ -1.99
HMGB3-203ENST00000430118 A0A0B4J2C4 111 aa2.64□□□□□ -1.99
HMGB3-203ENST00000430118 hADV29S1A0JD25 119 aa2.64□□□□□ -1.99
HMGB3-203ENST00000430118 LINC01549A6NIU2 74 aa2.64□□□□□ -1.99
HMGB3-203ENST00000430118 A8MU10 97 aa2.64□□□□□ -1.99
HMGB3-203ENST00000430118 H3BP45 60 aa2.64□□□□□ -1.99
HMGB3-203ENST00000430118 PANO1I0J062 215 aa2.64□□□□□ -1.99
HMGB3-203ENST00000430118 TRBV12-3P01733 135 aa2.64□□□□□ -1.99
HMGB3-203ENST00000430118 PLNP26678 52 aa2.64□□□□□ -1.99
HMGB3-203ENST00000430118 FXYD3Q14802 87 aa2.64□□□□□ -1.99
HMGB3-203ENST00000430118 ATXN8Q156A1 80 aa2.64□□□□□ -1.99
HMGB3-203ENST00000430118 KISS1Q15726 138 aa2.64□□□□□ -1.99
HMGB3-203ENST00000430118 KIAA2026Q5HYC2 2103 aa2.64□□□□□ -1.99
HMGB3-203ENST00000430118 SPANXN5Q5MJ07 72 aa2.64□□□□□ -1.99
HMGB3-203ENST00000430118 FAM104BQ5XKR9 115 aa2.64□□□□□ -1.99
HMGB3-203ENST00000430118 ZNF818PQ6ZRF7 136 aa2.64□□□□□ -1.99
HMGB3-203ENST00000430118 MKXQ8IYA7 352 aa2.64□□□□□ -1.99
HMGB3-203ENST00000430118 FAM216BQ8N7L0 139 aa2.64□□□□□ -1.99
HMGB3-203ENST00000430118 BORCS8Q96FH0 119 aa2.64□□□□□ -1.99
HMGB3-203ENST00000430118 DSCR8Q96T75 97 aa2.64□□□□□ -1.99
HMGB3-203ENST00000430118 CCL13Q99616 98 aa2.64□□□□□ -1.99
HMGB3-203ENST00000430118 NXT2Q9NPJ8 142 aaKnown RBP2.64□□□□□ -1.99
HMGB3-203ENST00000430118 AMMECR1Q9Y4X0 333 aaPredicted RBP2.64□□□□□ -1.99
HMGB3-203ENST00000430118 IGKV2D-26A0A0A0MRZ7 120 aa2.63□□□□□ -1.99
HMGB3-203ENST00000430118 LOC107984156A0A0G2JMH3 177 aa2.63□□□□□ -1.99
HMGB3-203ENST00000430118 KNCNA6PVL3 124 aa2.63□□□□□ -1.99
HMGB3-203ENST00000430118 SPINK4O60575 86 aa2.63□□□□□ -1.99
HMGB3-203ENST00000430118 IGHV3-11P01762 117 aa2.63□□□□□ -1.99
HMGB3-203ENST00000430118 TLX1NBP0CAT3 122 aa2.63□□□□□ -1.99
HMGB3-203ENST00000430118 IAPPP10997 89 aa2.63□□□□□ -1.99
HMGB3-203ENST00000430118 ZNF823P16415 610 aa2.63□□□□□ -1.99
HMGB3-203ENST00000430118 BLCAPP62952 87 aa2.63□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms