RNA–Protein interactions for RNA: ENST00000430038.5

CPSF4-203, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 735 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-203ENST00000430038 HBBP68871 147 aa10.51□□□□□ -0.73
CPSF4-203ENST00000430038 Q6ZRP5 223 aa10.51□□□□□ -0.73
CPSF4-203ENST00000430038 KRTAP11-1Q8IUC1 163 aa10.51□□□□□ -0.73
CPSF4-203ENST00000430038 A0A1B0GW15 77 aa10.5□□□□□ -0.73
CPSF4-203ENST00000430038 SPAG11BQ08648 103 aa10.5□□□□□ -0.73
CPSF4-203ENST00000430038 PHF5AQ7RTV0 110 aaKnown RBP10.5□□□□□ -0.73
CPSF4-203ENST00000430038 TMEM18Q96B42 140 aa10.49□□□□□ -0.73
CPSF4-203ENST00000430038 PSORS1C2Q9UIG4 136 aa10.49□□□□□ -0.73
CPSF4-203ENST00000430038 FAM168BA1KXE4 195 aa10.48□□□□□ -0.73
CPSF4-203ENST00000430038 MRPS36P82909 103 aaKnown RBP10.48□□□□□ -0.73
CPSF4-203ENST00000430038 RPL18AQ02543 176 aaKnown RBP10.48□□□□□ -0.73
CPSF4-203ENST00000430038 UNQ6190/PRO20217Q6UXQ8 127 aa10.48□□□□□ -0.73
CPSF4-203ENST00000430038 ORAOV1Q8WV07 137 aa10.48□□□□□ -0.73
CPSF4-203ENST00000430038 SMDT1Q9H4I9 107 aa10.48□□□□□ -0.73
CPSF4-203ENST00000430038 PKIGQ9Y2B9 76 aa10.48□□□□□ -0.73
CPSF4-203ENST00000430038 SMAGPQ0VAQ4 97 aa10.47□□□□□ -0.73
CPSF4-203ENST00000430038 RNF151Q2KHN1 245 aa10.47□□□□□ -0.73
CPSF4-203ENST00000430038 KRTAP7-1Q8IUC3 87 aa10.47□□□□□ -0.73
CPSF4-203ENST00000430038 SPANXA1Q9NS26 97 aa10.47□□□□□ -0.73
CPSF4-203ENST00000430038 KIAA0087Q14695 138 aa10.46□□□□□ -0.73
CPSF4-203ENST00000430038 ZC2HC1BQ5TFG8 222 aa10.46□□□□□ -0.73
CPSF4-203ENST00000430038 TMEM136Q6ZRR5 245 aa10.46□□□□□ -0.73
CPSF4-203ENST00000430038 OR10D4PQ8NGN7 298 aa10.46□□□□□ -0.73
CPSF4-203ENST00000430038 C6orf48Q9UBA6 75 aa10.46□□□□□ -0.73
CPSF4-203ENST00000430038 F8W036 122 aa10.45□□□□□ -0.74
CPSF4-203ENST00000430038 PRELID3AQ96N28 172 aa10.45□□□□□ -0.74
CPSF4-203ENST00000430038 MRPL35Q9NZE8 188 aaKnown RBP10.45□□□□□ -0.74
CPSF4-203ENST00000430038 IGLV4-3A0A075B6K6 122 aa10.44□□□□□ -0.74
CPSF4-203ENST00000430038 IFITM10A6NMD0 228 aa10.44□□□□□ -0.74
CPSF4-203ENST00000430038 PPBPP02775 128 aa10.44□□□□□ -0.74
CPSF4-203ENST00000430038 LINC00242Q5T6M2 205 aa10.44□□□□□ -0.74
CPSF4-203ENST00000430038 REG3GQ6UW15 175 aa10.44□□□□□ -0.74
CPSF4-203ENST00000430038 ORMDL3Q8N138 153 aa10.44□□□□□ -0.74
CPSF4-203ENST00000430038 PRSS47A8MTI9 375 aa10.43□□□□□ -0.74
CPSF4-203ENST00000430038 S100A8P05109 93 aa10.43□□□□□ -0.74
CPSF4-203ENST00000430038 LPAP08519 4548 aa10.42□□□□□ -0.74
CPSF4-203ENST00000430038 LOC389332A0A1B0GUA5 103 aa10.42□□□□□ -0.74
CPSF4-203ENST00000430038 PYGO1Q9Y3Y4 419 aa10.42□□□□□ -0.74
CPSF4-203ENST00000430038 A0A087WZ39 114 aa10.41□□□□□ -0.74
CPSF4-203ENST00000430038 C1orf137Q5JT78 98 aa10.41□□□□□ -0.74
CPSF4-203ENST00000430038 C2orf82Q6UX34 121 aa10.41□□□□□ -0.74
CPSF4-203ENST00000430038 LINC00173Q6ZV60 143 aa10.41□□□□□ -0.74
CPSF4-203ENST00000430038 ATP5L2Q7Z4Y8 100 aa10.41□□□□□ -0.74
CPSF4-203ENST00000430038 NDUFA1O15239 70 aa10.4□□□□□ -0.74
CPSF4-203ENST00000430038 MT-ND6P03923 174 aa10.4□□□□□ -0.74
CPSF4-203ENST00000430038 TLX1NBP0CAT3 122 aa10.4□□□□□ -0.74
CPSF4-203ENST00000430038 RAB5AP20339 215 aa10.39□□□□□ -0.75
CPSF4-203ENST00000430038 GAGE2EQ4V326 116 aa10.39□□□□□ -0.75
CPSF4-203ENST00000430038 GAGE2DQ9UEU5 116 aa10.39□□□□□ -0.75
CPSF4-203ENST00000430038 F8WDY8 70 aa10.38□□□□□ -0.75
CPSF4-203ENST00000430038 IFI27P40305 119 aaPredicted RBP10.38□□□□□ -0.75
CPSF4-203ENST00000430038 UBE2D1P51668 147 aa10.38□□□□□ -0.75
CPSF4-203ENST00000430038 TMEM141Q96I45 108 aa10.38□□□□□ -0.75
CPSF4-203ENST00000430038 IMMP2LQ96T52 175 aa10.38□□□□□ -0.75
CPSF4-203ENST00000430038 IGLV7-43P04211 117 aa10.37□□□□□ -0.75
CPSF4-203ENST00000430038 FAM19A5Q7Z5A7 132 aaPredicted RBP10.37□□□□□ -0.75
CPSF4-203ENST00000430038 TGIF2-C20orf24A0A0A6YYL0 155 aa10.36□□□□□ -0.75
CPSF4-203ENST00000430038 C9orf129Q5T035 196 aaKnown RBP10.36□□□□□ -0.75
CPSF4-203ENST00000430038 C2orf66Q6UXQ4 117 aa10.36□□□□□ -0.75
CPSF4-203ENST00000430038 Q8N8P6 123 aa10.36□□□□□ -0.75
CPSF4-203ENST00000430038 AMELXQ99217 191 aa10.36□□□□□ -0.75
CPSF4-203ENST00000430038 IGIPA6NJ69 53 aa10.35□□□□□ -0.75
CPSF4-203ENST00000430038 MAP1LC3AQ9H492 121 aa10.35□□□□□ -0.75
CPSF4-203ENST00000430038 PRR26Q8N8Z3 221 aa10.34□□□□□ -0.75
CPSF4-203ENST00000430038 ANAPC16Q96DE5 110 aa10.34□□□□□ -0.75
CPSF4-203ENST00000430038 LAMTOR2Q9Y2Q5 125 aa10.34□□□□□ -0.75
CPSF4-203ENST00000430038 TEX43Q6ZNM6 134 aa10.33□□□□□ -0.76
CPSF4-203ENST00000430038 MT-ND4LP03901 98 aa10.32□□□□□ -0.76
CPSF4-203ENST00000430038 PNRC1Q12796 327 aaPredicted RBP10.32□□□□□ -0.76
CPSF4-203ENST00000430038 CYSLTR1Q9Y271 337 aa10.32□□□□□ -0.76
CPSF4-203ENST00000430038 TRBV30A0A0K0K1B3 111 aa10.31□□□□□ -0.76
CPSF4-203ENST00000430038 KRTAP1-4P0C5Y4 121 aa10.31□□□□□ -0.76
CPSF4-203ENST00000430038 FAM19A3Q7Z5A8 133 aa10.31□□□□□ -0.76
CPSF4-203ENST00000430038 NDUFC2-KCTD14E9PQ53 114 aa10.3□□□□□ -0.76
CPSF4-203ENST00000430038 H0Y9J4 135 aa10.3□□□□□ -0.76
CPSF4-203ENST00000430038 ADCYAP1P18509 176 aa10.3□□□□□ -0.76
CPSF4-203ENST00000430038 KIAA1644Q3SXP7 199 aa10.3□□□□□ -0.76
CPSF4-203ENST00000430038 LINC01561Q8N1V8 128 aa10.3□□□□□ -0.76
CPSF4-203ENST00000430038 M0QXV9 152 aa10.29□□□□□ -0.76
CPSF4-203ENST00000430038 VCX2Q9H322 139 aa10.29□□□□□ -0.76
CPSF4-203ENST00000430038 LINC00469Q8N7U9 141 aa10.28□□□□□ -0.76
CPSF4-203ENST00000430038 DIRC1Q969H9 104 aa10.28□□□□□ -0.76
CPSF4-203ENST00000430038 TOMM7Q9P0U1 55 aa10.28□□□□□ -0.76
CPSF4-203ENST00000430038 CDKN2A-AS1Q9UH64 79 aa10.28□□□□□ -0.76
CPSF4-203ENST00000430038 ORMDL2Q53FV1 153 aa10.27□□□□□ -0.77
CPSF4-203ENST00000430038 Q6ZN92 141 aa10.27□□□□□ -0.77
CPSF4-203ENST00000430038 C2orf88Q9BSF0 95 aa10.27□□□□□ -0.77
CPSF4-203ENST00000430038 PACRGQ96M98 296 aaPredicted RBP10.26□□□□□ -0.77
CPSF4-203ENST00000430038 Q8IZM0 81 aa10.25□□□□□ -0.77
CPSF4-203ENST00000430038 TOMM6Q96B49 74 aa10.25□□□□□ -0.77
CPSF4-203ENST00000430038 CTDSP1Q9GZU7 261 aa10.25□□□□□ -0.77
CPSF4-203ENST00000430038 XAGE1AQ9HD64 81 aa10.25□□□□□ -0.77
CPSF4-203ENST00000430038 NPSP0C0P6 89 aa10.24□□□□□ -0.77
CPSF4-203ENST00000430038 UBE2BP63146 152 aa10.24□□□□□ -0.77
CPSF4-203ENST00000430038 IFITM2Q01629 132 aa10.24□□□□□ -0.77
CPSF4-203ENST00000430038 C6orf226Q5I0X4 101 aa10.24□□□□□ -0.77
CPSF4-203ENST00000430038 CLLU1Q5K131 121 aa10.24□□□□□ -0.77
CPSF4-203ENST00000430038 NXT2Q9NPJ8 142 aaKnown RBP10.24□□□□□ -0.77
CPSF4-203ENST00000430038 K7EMI3 77 aa10.23□□□□□ -0.77
CPSF4-203ENST00000430038 RAB14P61106 215 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms