RNA–Protein interactions for RNA: ENST00000429746.1

CTSD-203, Transcript of cathepsin D, humanhuman

TSL 3

Gene CTSD, Length 690 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-203ENST00000429746 ZC2HC1BQ5TFG8 222 aa11.14□□□□□ -0.63
CTSD-203ENST00000429746 CFAP161Q6P656 301 aa11.14□□□□□ -0.63
CTSD-203ENST00000429746 LINC00526Q96FQ7 95 aa11.14□□□□□ -0.63
CTSD-203ENST00000429746 AMELXQ99217 191 aa11.14□□□□□ -0.63
CTSD-203ENST00000429746 CYSLTR1Q9Y271 337 aa11.14□□□□□ -0.63
CTSD-203ENST00000429746 FABP9Q0Z7S8 132 aa11.13□□□□□ -0.63
CTSD-203ENST00000429746 PKHD1L1Q86WI1 4243 aa11.13□□□□□ -0.63
CTSD-203ENST00000429746 KRTAP10-4P60372 401 aaPredicted RBP11.12□□□□□ -0.63
CTSD-203ENST00000429746 LINC00242Q5T6M2 205 aa11.12□□□□□ -0.63
CTSD-203ENST00000429746 TOMM6Q96B49 74 aa11.12□□□□□ -0.63
CTSD-203ENST00000429746 TMEM141Q96I45 108 aa11.12□□□□□ -0.63
CTSD-203ENST00000429746 IFITM10A6NMD0 228 aa11.11□□□□□ -0.63
CTSD-203ENST00000429746 COX7A2LO14548 114 aa11.11□□□□□ -0.63
CTSD-203ENST00000429746 UBE2D1P51668 147 aa11.11□□□□□ -0.63
CTSD-203ENST00000429746 COX6A2Q02221 97 aa11.11□□□□□ -0.63
CTSD-203ENST00000429746 C5orf38Q86SI9 138 aa11.11□□□□□ -0.63
CTSD-203ENST00000429746 CBLN2Q8IUK8 224 aa11.11□□□□□ -0.63
CTSD-203ENST00000429746 A0A096LNJ9 63 aa11.1□□□□□ -0.63
CTSD-203ENST00000429746 PLA2G1BP04054 148 aaKnown RBP11.1□□□□□ -0.63
CTSD-203ENST00000429746 NPSP0C0P6 89 aa11.1□□□□□ -0.63
CTSD-203ENST00000429746 C18orf32Q8TCD1 76 aa11.1□□□□□ -0.63
CTSD-203ENST00000429746 AP5S1Q9NUS5 200 aa11.1□□□□□ -0.63
CTSD-203ENST00000429746 CHTF8P0CG12 524 aa11.09□□□□□ -0.63
CTSD-203ENST00000429746 FAM19A3Q7Z5A8 133 aa11.09□□□□□ -0.63
CTSD-203ENST00000429746 TIMM17AQ99595 171 aa11.09□□□□□ -0.63
CTSD-203ENST00000429746 TRAPPC1Q9Y5R8 145 aa11.09□□□□□ -0.63
CTSD-203ENST00000429746 IGHV3-64A0A075B6Q5 118 aa11.08□□□□□ -0.64
CTSD-203ENST00000429746 PRSS3P2Q8NHM4 247 aa11.08□□□□□ -0.64
CTSD-203ENST00000429746 IGLV4-69A0A075B6H9 119 aa11.07□□□□□ -0.64
CTSD-203ENST00000429746 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.07□□□□□ -0.64
CTSD-203ENST00000429746 SPACA4Q8TDM5 124 aa11.07□□□□□ -0.64
CTSD-203ENST00000429746 TEX43Q6ZNM6 134 aa11.06□□□□□ -0.64
CTSD-203ENST00000429746 Q6ZRU5 148 aa11.06□□□□□ -0.64
CTSD-203ENST00000429746 LINC00528Q8N1L1 170 aa11.06□□□□□ -0.64
CTSD-203ENST00000429746 A0A087WZ39 114 aa11.05□□□□□ -0.64
CTSD-203ENST00000429746 KIAA0087Q14695 138 aa11.05□□□□□ -0.64
CTSD-203ENST00000429746 ERASQ7Z444 233 aa11.05□□□□□ -0.64
CTSD-203ENST00000429746 LRP1Q07954 4544 aaKnown RBP11.04□□□□□ -0.64
CTSD-203ENST00000429746 MALP21145 153 aa11.04□□□□□ -0.64
CTSD-203ENST00000429746 C2orf48Q96LS8 159 aa11.04□□□□□ -0.64
CTSD-203ENST00000429746 CARD19Q96LW7 228 aa11.04□□□□□ -0.64
CTSD-203ENST00000429746 FAT3Q8TDW7 4589 aa11.04□□□□□ -0.64
CTSD-203ENST00000429746 A0A096LNI7 61 aa11.03□□□□□ -0.64
CTSD-203ENST00000429746 SYCNQ0VAF6 134 aa11.03□□□□□ -0.64
CTSD-203ENST00000429746 OR10D4PQ8NGN7 298 aa11.03□□□□□ -0.64
CTSD-203ENST00000429746 VCX2Q9H322 139 aa11.03□□□□□ -0.64
CTSD-203ENST00000429746 SMCO4Q9NRQ5 59 aa11.03□□□□□ -0.64
CTSD-203ENST00000429746 ZNF561-AS1K7EIQ3 104 aa11.02□□□□□ -0.65
CTSD-203ENST00000429746 SPAG11BQ08648 103 aa11.02□□□□□ -0.65
CTSD-203ENST00000429746 FA2HQ7L5A8 372 aa11.02□□□□□ -0.65
CTSD-203ENST00000429746 A0A087WYN8 130 aa11.01□□□□□ -0.65
CTSD-203ENST00000429746 G0S2P27469 103 aa11.01□□□□□ -0.65
CTSD-203ENST00000429746 C10orf25Q5T742 122 aa11.01□□□□□ -0.65
CTSD-203ENST00000429746 Q6ZN92 141 aa11.01□□□□□ -0.65
CTSD-203ENST00000429746 ORAOV1Q8WV07 137 aa11.01□□□□□ -0.65
CTSD-203ENST00000429746 SCGB3A1Q96QR1 104 aa11.01□□□□□ -0.65
CTSD-203ENST00000429746 PLAC8Q9NZF1 115 aa11.01□□□□□ -0.65
CTSD-203ENST00000429746 APOMO95445 188 aa11□□□□□ -0.65
CTSD-203ENST00000429746 LINC00614P0C842 121 aa11□□□□□ -0.65
CTSD-203ENST00000429746 LINC01561Q8N1V8 128 aa11□□□□□ -0.65
CTSD-203ENST00000429746 C2orf88Q9BSF0 95 aa11□□□□□ -0.65
CTSD-203ENST00000429746 A0A0J9YXV3 536 aa10.99□□□□□ -0.65
CTSD-203ENST00000429746 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.99□□□□□ -0.65
CTSD-203ENST00000429746 PDZD11Q5EBL8 140 aa10.99□□□□□ -0.65
CTSD-203ENST00000429746 LINC01549A6NIU2 74 aa10.98□□□□□ -0.65
CTSD-203ENST00000429746 COLCA2A8K830 154 aa10.98□□□□□ -0.65
CTSD-203ENST00000429746 PMCHL1Q16048 86 aa10.98□□□□□ -0.65
CTSD-203ENST00000429746 CAMK2N2Q96S95 79 aa10.98□□□□□ -0.65
CTSD-203ENST00000429746 CST9LQ9H4G1 147 aa10.98□□□□□ -0.65
CTSD-203ENST00000429746 CDKN2A-AS1Q9UH64 79 aa10.98□□□□□ -0.65
CTSD-203ENST00000429746 HERC1Q15751 4861 aa10.98□□□□□ -0.65
CTSD-203ENST00000429746 IGLV5-45A0A087WSX0 123 aa10.97□□□□□ -0.65
CTSD-203ENST00000429746 IGKV2-24A0A0C4DH68 120 aa10.97□□□□□ -0.65
CTSD-203ENST00000429746 MRPL35Q9NZE8 188 aaKnown RBP10.97□□□□□ -0.65
CTSD-203ENST00000429746 LINC00310P59036 64 aa10.96□□□□□ -0.65
CTSD-203ENST00000429746 RNF151Q2KHN1 245 aa10.96□□□□□ -0.65
CTSD-203ENST00000429746 PAPPA-AS1Q5QFB9 102 aa10.96□□□□□ -0.65
CTSD-203ENST00000429746 UNQ6190/PRO20217Q6UXQ8 127 aa10.96□□□□□ -0.65
CTSD-203ENST00000429746 C6orf48Q9UBA6 75 aa10.96□□□□□ -0.65
CTSD-203ENST00000429746 KRTAP29-1A8MX34 341 aaPredicted RBP10.95□□□□□ -0.66
CTSD-203ENST00000429746 F8WDY8 70 aa10.95□□□□□ -0.66
CTSD-203ENST00000429746 TRGC2P03986 189 aa10.95□□□□□ -0.66
CTSD-203ENST00000429746 PTTG1IPP53801 180 aa10.95□□□□□ -0.66
CTSD-203ENST00000429746 TINCRA0A1B0GVN0 87 aa10.94□□□□□ -0.66
CTSD-203ENST00000429746 J3QL48 77 aa10.94□□□□□ -0.66
CTSD-203ENST00000429746 HBDP02042 147 aa10.94□□□□□ -0.66
CTSD-203ENST00000429746 HNRNPA3P51991 378 aaKnown RBP10.94□□□□□ -0.66
CTSD-203ENST00000429746 HERVK_113P63121 156 aa10.94□□□□□ -0.66
CTSD-203ENST00000429746 PMVKQ15126 192 aa10.94□□□□□ -0.66
CTSD-203ENST00000429746 MAJINQ3KP22 176 aa10.94□□□□□ -0.66
CTSD-203ENST00000429746 C2orf82Q6UX34 121 aa10.94□□□□□ -0.66
CTSD-203ENST00000429746 LOC107984640A0A0U1RRK4 108 aa10.93□□□□□ -0.66
CTSD-203ENST00000429746 SCO1O75880 301 aa10.93□□□□□ -0.66
CTSD-203ENST00000429746 SMIM1B2RUZ4 78 aa10.92□□□□□ -0.66
CTSD-203ENST00000429746 NDUFA1O15239 70 aa10.92□□□□□ -0.66
CTSD-203ENST00000429746 TLX1NBP0CAT3 122 aa10.92□□□□□ -0.66
CTSD-203ENST00000429746 STPG4Q8N801 248 aa10.92□□□□□ -0.66
CTSD-203ENST00000429746 A0A1W2PNN7 141 aa10.91□□□□□ -0.66
CTSD-203ENST00000429746 RAB5BP61020 215 aa10.91□□□□□ -0.66
CTSD-203ENST00000429746 SEC11AP67812 179 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms