RNA–Protein interactions for RNA: ENST00000429713.6

SYNPO2-202, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 9,920 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-202ENST00000429713 PRO3102Q9H379 93 aa5.64□□□□□ -1.51
SYNPO2-202ENST00000429713 ATRQ13535 2644 aa5.64□□□□□ -1.51
SYNPO2-202ENST00000429713 CR1P17927 2039 aa5.64□□□□□ -1.51
SYNPO2-202ENST00000429713 NBEAL1Q6ZS30 2694 aa5.64□□□□□ -1.51
SYNPO2-202ENST00000429713 PLA2G2CQ5R387 149 aa5.63□□□□□ -1.51
SYNPO2-202ENST00000429713 LOC110117498A0A087WWA1 95 aa5.63□□□□□ -1.51
SYNPO2-202ENST00000429713 ELOF1P60002 83 aaKnown RBP5.63□□□□□ -1.51
SYNPO2-202ENST00000429713 RNASE13Q5GAN3 156 aaKnown RBP5.63□□□□□ -1.51
SYNPO2-202ENST00000429713 CTSGP08311 255 aa5.63□□□□□ -1.51
SYNPO2-202ENST00000429713 KTN1-AS1Q86SY8 53 aa5.63□□□□□ -1.51
SYNPO2-202ENST00000429713 IGHV3-53P01767 116 aa5.63□□□□□ -1.51
SYNPO2-202ENST00000429713 SMCPP49901 116 aaPredicted RBP5.63□□□□□ -1.51
SYNPO2-202ENST00000429713 SPTSSBQ8NFR3 76 aa5.62□□□□□ -1.51
SYNPO2-202ENST00000429713 IGLV2-18A0A075B6J9 118 aa5.62□□□□□ -1.51
SYNPO2-202ENST00000429713 B4DSR2 109 aa5.62□□□□□ -1.51
SYNPO2-202ENST00000429713 IGHV3-16A0A0C4DH30 117 aa5.62□□□□□ -1.51
SYNPO2-202ENST00000429713 IGFL2Q6UWQ7 119 aa5.62□□□□□ -1.51
SYNPO2-202ENST00000429713 C3orf56Q8N813 242 aa5.62□□□□□ -1.51
SYNPO2-202ENST00000429713 K7ERS5 55 aa5.62□□□□□ -1.51
SYNPO2-202ENST00000429713 DIRC1Q969H9 104 aa5.62□□□□□ -1.51
SYNPO2-202ENST00000429713 IGLV4-3A0A075B6K6 122 aa5.62□□□□□ -1.51
SYNPO2-202ENST00000429713 IGHV7-81A0A0B4J1V7 117 aa5.61□□□□□ -1.51
SYNPO2-202ENST00000429713 AMELXQ99217 191 aa5.61□□□□□ -1.51
SYNPO2-202ENST00000429713 FAM30AQ9NZY2 134 aa5.61□□□□□ -1.51
SYNPO2-202ENST00000429713 UBE2E2Q96LR5 201 aa5.61□□□□□ -1.51
SYNPO2-202ENST00000429713 Q8N6K4 173 aa5.61□□□□□ -1.51
SYNPO2-202ENST00000429713 CHKB-CPT1BH3BT56 60 aa5.61□□□□□ -1.51
SYNPO2-202ENST00000429713 M0QY20 66 aa5.61□□□□□ -1.51
SYNPO2-202ENST00000429713 DEFB131AP59861 70 aa5.61□□□□□ -1.51
SYNPO2-202ENST00000429713 RPL39P62891 51 aaKnown RBP5.6□□□□□ -1.51
SYNPO2-202ENST00000429713 IGHV3-38A0A0C4DH36 116 aa5.6□□□□□ -1.51
SYNPO2-202ENST00000429713 NTM-AS1Q6ZSK4 140 aa5.6□□□□□ -1.51
SYNPO2-202ENST00000429713 BRI3O95415 125 aa5.6□□□□□ -1.51
SYNPO2-202ENST00000429713 LINC01356Q8N9X3 169 aa5.6□□□□□ -1.51
SYNPO2-202ENST00000429713 UNC79Q9P2D8 2635 aa5.6□□□□□ -1.51
SYNPO2-202ENST00000429713 IGLV4-69A0A075B6H9 119 aa5.6□□□□□ -1.51
SYNPO2-202ENST00000429713 C1orf229Q6ZS94 237 aaPredicted RBP5.6□□□□□ -1.51
SYNPO2-202ENST00000429713 SPRY2O43597 315 aa5.59□□□□□ -1.51
SYNPO2-202ENST00000429713 MSMBP08118 114 aa5.59□□□□□ -1.51
SYNPO2-202ENST00000429713 SEM1Q6ZVN7 128 aa5.59□□□□□ -1.51
SYNPO2-202ENST00000429713 CHD9Q3L8U1 2897 aa5.59□□□□□ -1.51
SYNPO2-202ENST00000429713 Q6ZVQ6 151 aa5.59□□□□□ -1.51
SYNPO2-202ENST00000429713 LINC00467Q9BRT7 94 aa5.59□□□□□ -1.51
SYNPO2-202ENST00000429713 IGLV5-45A0A087WSX0 123 aa5.59□□□□□ -1.51
SYNPO2-202ENST00000429713 COX7BP24311 80 aa5.59□□□□□ -1.51
SYNPO2-202ENST00000429713 CRIP1P50238 77 aa5.59□□□□□ -1.51
SYNPO2-202ENST00000429713 ASPMQ8IZT6 3477 aa5.59□□□□□ -1.51
SYNPO2-202ENST00000429713 IGLV1-47P01700 117 aa5.59□□□□□ -1.52
SYNPO2-202ENST00000429713 MPLKIPQ8TAP9 179 aa5.59□□□□□ -1.52
SYNPO2-202ENST00000429713 COL6A5A8TX70 2615 aa5.59□□□□□ -1.52
SYNPO2-202ENST00000429713 DHRS4-AS1Q9P1J3 65 aa5.59□□□□□ -1.52
SYNPO2-202ENST00000429713 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.58□□□□□ -1.52
SYNPO2-202ENST00000429713 IGKV2-29A2NJV5 120 aaPredicted RBP5.58□□□□□ -1.52
SYNPO2-202ENST00000429713 PRAC2D3DTV9 90 aa5.58□□□□□ -1.52
SYNPO2-202ENST00000429713 HIGD2AQ9BW72 106 aa5.58□□□□□ -1.52
SYNPO2-202ENST00000429713 Q6ZRU5 148 aa5.58□□□□□ -1.52
SYNPO2-202ENST00000429713 KLLNB2CW77 178 aa5.58□□□□□ -1.52
SYNPO2-202ENST00000429713 DAZAP2Q15038 168 aaPredicted RBP5.58□□□□□ -1.52
SYNPO2-202ENST00000429713 GPHB5Q86YW7 130 aa5.58□□□□□ -1.52
SYNPO2-202ENST00000429713 C5orf56Q8N8D9 126 aa5.58□□□□□ -1.52
SYNPO2-202ENST00000429713 ZNF580Q9UK33 172 aa5.58□□□□□ -1.52
SYNPO2-202ENST00000429713 TRBV6-4A0A1B0GX49 114 aa5.58□□□□□ -1.52
SYNPO2-202ENST00000429713 K7EQD1 137 aa5.58□□□□□ -1.52
SYNPO2-202ENST00000429713 C7orf65Q6ZTY9 151 aa5.58□□□□□ -1.52
SYNPO2-202ENST00000429713 Q8N9W7 124 aa5.58□□□□□ -1.52
SYNPO2-202ENST00000429713 ZFAND3Q9H8U3 227 aa5.58□□□□□ -1.52
SYNPO2-202ENST00000429713 HCG22E2RYF7 251 aa5.58□□□□□ -1.52
SYNPO2-202ENST00000429713 HTN3P15516 51 aa5.58□□□□□ -1.52
SYNPO2-202ENST00000429713 MSMPQ1L6U9 139 aa5.58□□□□□ -1.52
SYNPO2-202ENST00000429713 PRM2P04554 102 aa5.57□□□□□ -1.52
SYNPO2-202ENST00000429713 C4orf26Q17RF5 130 aa5.57□□□□□ -1.52
SYNPO2-202ENST00000429713 Q8N3U1 123 aa5.57□□□□□ -1.52
SYNPO2-202ENST00000429713 DMDP11532 3685 aa5.57□□□□□ -1.52
SYNPO2-202ENST00000429713 MIR7-3HGQ8N6C7 128 aa5.57□□□□□ -1.52
SYNPO2-202ENST00000429713 IGLV5-39A0A0G2JS06 123 aa5.57□□□□□ -1.52
SYNPO2-202ENST00000429713 ZFAND2AQ8N6M9 145 aa5.57□□□□□ -1.52
SYNPO2-202ENST00000429713 LAMA5O15230 3695 aa5.57□□□□□ -1.52
SYNPO2-202ENST00000429713 MGAM2Q2M2H8 2515 aa5.56□□□□□ -1.52
SYNPO2-202ENST00000429713 BOD1L1Q8NFC6 3051 aa5.56□□□□□ -1.52
SYNPO2-202ENST00000429713 Q8N814 137 aa5.56□□□□□ -1.52
SYNPO2-202ENST00000429713 MAST4O15021 2626 aa5.56□□□□□ -1.52
SYNPO2-202ENST00000429713 A0A1W2PNU3 283 aaPredicted RBP5.56□□□□□ -1.52
SYNPO2-202ENST00000429713 NBEAQ8NFP9 2946 aa5.55□□□□□ -1.52
SYNPO2-202ENST00000429713 ETDCA0A1B0GVM5 59 aa5.55□□□□□ -1.52
SYNPO2-202ENST00000429713 ASB16-AS1Q495Z4 193 aa5.55□□□□□ -1.52
SYNPO2-202ENST00000429713 Q1T7F1 81 aa5.55□□□□□ -1.52
SYNPO2-202ENST00000429713 KALRNO60229 2985 aa5.55□□□□□ -1.52
SYNPO2-202ENST00000429713 C16orf74Q96GX8 76 aa5.55□□□□□ -1.52
SYNPO2-202ENST00000429713 LINC00336Q6ZUF6 198 aa5.54□□□□□ -1.52
SYNPO2-202ENST00000429713 MAP1AP78559 2803 aaPredicted RBP5.54□□□□□ -1.52
SYNPO2-202ENST00000429713 LINC01547P58512 204 aaPredicted RBP5.54□□□□□ -1.52
SYNPO2-202ENST00000429713 Q8IZM0 81 aa5.54□□□□□ -1.52
SYNPO2-202ENST00000429713 TSHBP01222 138 aa5.54□□□□□ -1.52
SYNPO2-202ENST00000429713 DEFB130BP0DP73 79 aa5.54□□□□□ -1.52
SYNPO2-202ENST00000429713 DEFB130AP0DP74 79 aa5.54□□□□□ -1.52
SYNPO2-202ENST00000429713 SERTAD4-AS1Q5TG53 156 aa5.54□□□□□ -1.52
SYNPO2-202ENST00000429713 GRNP28799 593 aaKnown RBP5.54□□□□□ -1.52
SYNPO2-202ENST00000429713 LINC00208Q96KT6 92 aa5.54□□□□□ -1.52
SYNPO2-202ENST00000429713 A8MZ25 164 aa5.54□□□□□ -1.52
SYNPO2-202ENST00000429713 CDKN2A-AS1Q9UH64 79 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms