RNA–Protein interactions for RNA: ENST00000428982.4

SYNGAP1-203, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-203ENST00000428982 ZFAND2AQ8N6M9 145 aa10.6□□□□□ -0.71
SYNGAP1-203ENST00000428982 TOMM7Q9P0U1 55 aa10.6□□□□□ -0.71
SYNGAP1-203ENST00000428982 UBE2D4Q9Y2X8 147 aa10.6□□□□□ -0.71
SYNGAP1-203ENST00000428982 AMELXQ99217 191 aa10.6□□□□□ -0.71
SYNGAP1-203ENST00000428982 A8MZ25 164 aa10.59□□□□□ -0.71
SYNGAP1-203ENST00000428982 LINC00158P58513 81 aa10.59□□□□□ -0.71
SYNGAP1-203ENST00000428982 CCKP06307 115 aa10.59□□□□□ -0.71
SYNGAP1-203ENST00000428982 PIK3CD-AS1Q5SR53 167 aa10.59□□□□□ -0.71
SYNGAP1-203ENST00000428982 LINC00474Q9P2X8 69 aa10.59□□□□□ -0.71
SYNGAP1-203ENST00000428982 PAX4O43316 350 aa10.59□□□□□ -0.71
SYNGAP1-203ENST00000428982 RMI2Q96E14 147 aa10.59□□□□□ -0.71
SYNGAP1-203ENST00000428982 A6NDX4 124 aa10.58□□□□□ -0.72
SYNGAP1-203ENST00000428982 KLK9Q2XQG4 91 aa10.58□□□□□ -0.72
SYNGAP1-203ENST00000428982 KLK9Q9UKQ9 250 aa10.58□□□□□ -0.72
SYNGAP1-203ENST00000428982 USP9XQ93008 2570 aaPredicted RBP10.58□□□□□ -0.72
SYNGAP1-203ENST00000428982 IGLV4-3A0A075B6K6 122 aa10.57□□□□□ -0.72
SYNGAP1-203ENST00000428982 IGHV4OR15-8A0A075B7B6 117 aa10.57□□□□□ -0.72
SYNGAP1-203ENST00000428982 A0A087WW49 117 aa10.57□□□□□ -0.72
SYNGAP1-203ENST00000428982 IGF1P05019 195 aa10.57□□□□□ -0.72
SYNGAP1-203ENST00000428982 POLR2KP53803 58 aaKnown RBP10.57□□□□□ -0.72
SYNGAP1-203ENST00000428982 FAM19A1Q7Z5A9 133 aa10.57□□□□□ -0.72
SYNGAP1-203ENST00000428982 BOD1L1Q8NFC6 3051 aa10.57□□□□□ -0.72
SYNGAP1-203ENST00000428982 TMEM89A2RUT3 159 aa10.57□□□□□ -0.72
SYNGAP1-203ENST00000428982 JMJD7-PLA2G4BH0Y9G9 81 aa10.57□□□□□ -0.72
SYNGAP1-203ENST00000428982 LINC00482Q8N8I6 264 aa10.57□□□□□ -0.72
SYNGAP1-203ENST00000428982 USP24Q9UPU5 2620 aa10.56□□□□□ -0.72
SYNGAP1-203ENST00000428982 RPL28P46779 137 aaKnown RBP10.55□□□□□ -0.72
SYNGAP1-203ENST00000428982 CD164Q04900 197 aa10.55□□□□□ -0.72
SYNGAP1-203ENST00000428982 TLN2Q9Y4G6 2542 aa10.55□□□□□ -0.72
SYNGAP1-203ENST00000428982 TRBV6-5A0A0K0K1A5 114 aa10.55□□□□□ -0.72
SYNGAP1-203ENST00000428982 POLQO75417 2590 aa10.55□□□□□ -0.72
SYNGAP1-203ENST00000428982 IGHV3-73A0A0B4J1V6 119 aa10.54□□□□□ -0.72
SYNGAP1-203ENST00000428982 GPHB5Q86YW7 130 aa10.54□□□□□ -0.72
SYNGAP1-203ENST00000428982 ABCA12Q86UK0 2595 aa10.54□□□□□ -0.72
SYNGAP1-203ENST00000428982 ANKRD17O75179 2603 aaKnown RBP10.54□□□□□ -0.72
SYNGAP1-203ENST00000428982 SONP18583 2426 aaKnown RBP10.54□□□□□ -0.72
SYNGAP1-203ENST00000428982 ATMQ13315 3056 aa10.54□□□□□ -0.72
SYNGAP1-203ENST00000428982 DMXL2Q8TDJ6 3036 aa10.54□□□□□ -0.72
SYNGAP1-203ENST00000428982 FUSP35637 526 aaKnown RBP eCLIP10.54□□□□□ -0.72
SYNGAP1-203ENST00000428982 UNQ9165/PRO28630Q6UXU0 137 aa10.53□□□□□ -0.72
SYNGAP1-203ENST00000428982 SORL1Q92673 2214 aa10.53□□□□□ -0.72
SYNGAP1-203ENST00000428982 MIFP14174 115 aa10.53□□□□□ -0.72
SYNGAP1-203ENST00000428982 Q6YL49 198 aa10.52□□□□□ -0.73
SYNGAP1-203ENST00000428982 SND1-IT1Q9HBX3 110 aa10.52□□□□□ -0.73
SYNGAP1-203ENST00000428982 PRR9Q5T870 116 aa10.52□□□□□ -0.73
SYNGAP1-203ENST00000428982 SLPIP03973 132 aa10.51□□□□□ -0.73
SYNGAP1-203ENST00000428982 H7BZZ5 65 aa10.51□□□□□ -0.73
SYNGAP1-203ENST00000428982 NDUFA1O15239 70 aa10.51□□□□□ -0.73
SYNGAP1-203ENST00000428982 AVPP01185 164 aa10.51□□□□□ -0.73
SYNGAP1-203ENST00000428982 PLAC8L1A1L4L8 177 aa10.5□□□□□ -0.73
SYNGAP1-203ENST00000428982 RNASE3P12724 160 aaKnown RBP10.5□□□□□ -0.73
SYNGAP1-203ENST00000428982 SPINK13Q1W4C9 94 aa10.49□□□□□ -0.73
SYNGAP1-203ENST00000428982 KLLNB2CW77 178 aa10.49□□□□□ -0.73
SYNGAP1-203ENST00000428982 MIR7-3HGQ8N6C7 128 aa10.48□□□□□ -0.73
SYNGAP1-203ENST00000428982 CDKN2A-AS1Q9UH64 79 aa10.48□□□□□ -0.73
SYNGAP1-203ENST00000428982 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.48□□□□□ -0.73
SYNGAP1-203ENST00000428982 IGKV2-29A2NJV5 120 aaPredicted RBP10.48□□□□□ -0.73
SYNGAP1-203ENST00000428982 IGKV3OR2-268A0A0C4DH90 116 aa10.48□□□□□ -0.73
SYNGAP1-203ENST00000428982 IGHV3-16A0A0C4DH30 117 aa10.47□□□□□ -0.73
SYNGAP1-203ENST00000428982 ESRGQ1W209 222 aa10.47□□□□□ -0.73
SYNGAP1-203ENST00000428982 LITAFQ99732 161 aa10.47□□□□□ -0.73
SYNGAP1-203ENST00000428982 DNAJC9-AS1A6NH13 148 aa10.47□□□□□ -0.73
SYNGAP1-203ENST00000428982 SPTSSBQ8NFR3 76 aa10.47□□□□□ -0.73
SYNGAP1-203ENST00000428982 FP248Q71RG6 208 aaPredicted RBP10.47□□□□□ -0.73
SYNGAP1-203ENST00000428982 APRG1Q8IVJ8 170 aa10.47□□□□□ -0.73
SYNGAP1-203ENST00000428982 Q8N2B8 174 aa10.47□□□□□ -0.73
SYNGAP1-203ENST00000428982 UBE2L6O14933 153 aa10.46□□□□□ -0.73
SYNGAP1-203ENST00000428982 FAM218AQ96MZ4 157 aa10.46□□□□□ -0.74
SYNGAP1-203ENST00000428982 MYO9AB2RTY4 2548 aa10.45□□□□□ -0.74
SYNGAP1-203ENST00000428982 ZZEF1O43149 2961 aa10.45□□□□□ -0.74
SYNGAP1-203ENST00000428982 INSP01308 110 aa10.45□□□□□ -0.74
SYNGAP1-203ENST00000428982 UBE2E2Q96LR5 201 aa10.45□□□□□ -0.74
SYNGAP1-203ENST00000428982 TMEM256-PLSCR3K7ERE1 68 aa10.44□□□□□ -0.74
SYNGAP1-203ENST00000428982 A0A087WYN8 130 aa10.44□□□□□ -0.74
SYNGAP1-203ENST00000428982 DEFB1P60022 68 aa10.44□□□□□ -0.74
SYNGAP1-203ENST00000428982 IGSF10Q6WRI0 2623 aa10.44□□□□□ -0.74
SYNGAP1-203ENST00000428982 A0A087WZ39 114 aa10.44□□□□□ -0.74
SYNGAP1-203ENST00000428982 TRBV10-3A0A0K0K1G6 114 aa10.43□□□□□ -0.74
SYNGAP1-203ENST00000428982 M0QY20 66 aa10.43□□□□□ -0.74
SYNGAP1-203ENST00000428982 LRCOL1A6NCL2 159 aa10.43□□□□□ -0.74
SYNGAP1-203ENST00000428982 CMC4P56277 68 aaPredicted RBP10.43□□□□□ -0.74
SYNGAP1-203ENST00000428982 DEFB131AP59861 70 aa10.43□□□□□ -0.74
SYNGAP1-203ENST00000428982 IGHV3-38A0A0C4DH36 116 aa10.42□□□□□ -0.74
SYNGAP1-203ENST00000428982 BCE1O60756 84 aa10.42□□□□□ -0.74
SYNGAP1-203ENST00000428982 K7EQG2 157 aa10.42□□□□□ -0.74
SYNGAP1-203ENST00000428982 KLKP1Q107X0 134 aa10.42□□□□□ -0.74
SYNGAP1-203ENST00000428982 NOTCH3Q9UM47 2321 aa10.41□□□□□ -0.74
SYNGAP1-203ENST00000428982 SMIM11BQ8TCY0 68 aa10.41□□□□□ -0.74
SYNGAP1-203ENST00000428982 IGLV1-40P01703 118 aa10.41□□□□□ -0.74
SYNGAP1-203ENST00000428982 STHQ8IWL8 128 aa10.41□□□□□ -0.74
SYNGAP1-203ENST00000428982 DEFB136Q30KP8 78 aa10.4□□□□□ -0.74
SYNGAP1-203ENST00000428982 PSPHP1O15172 72 aa10.4□□□□□ -0.74
SYNGAP1-203ENST00000428982 LY6G6DO95868 133 aa10.4□□□□□ -0.74
SYNGAP1-203ENST00000428982 IGHV3OR16-12A0A075B7B8 117 aa10.4□□□□□ -0.74
SYNGAP1-203ENST00000428982 ZNF561-AS1K7EIQ3 104 aa10.4□□□□□ -0.74
SYNGAP1-203ENST00000428982 KIF25-AS1Q9Y6Z4 181 aa10.4□□□□□ -0.74
SYNGAP1-203ENST00000428982 ABCA2Q9BZC7 2435 aa10.39□□□□□ -0.75
SYNGAP1-203ENST00000428982 CFHR3Q02985 330 aa10.39□□□□□ -0.75
SYNGAP1-203ENST00000428982 C4orf48Q5BLP8 95 aa10.39□□□□□ -0.75
SYNGAP1-203ENST00000428982 INAFM1C9JVW0 142 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms